| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is yiiD [H]
Identifier: 147675114
GI number: 147675114
Start: 2467625
End: 2468557
Strand: Reverse
Name: yiiD [H]
Synonym: VC0395_A2312
Alternate gene names: 147675114
Gene position: 2468557-2467625 (Counterclockwise)
Preceding gene: 147673087
Following gene: 147675412
Centisome position: 81.63
GC content: 50.91
Gene sequence:
>933_bases TTGAGTATGTTTAAACTTATTACGCCGACCACGGATAATCAGCTCAATAAGTACTTCCATTTTCGTTGGCAAATGTTGCG CGAGCCGTGGCGGATGCCGATCGGTTCTGAGCGTGATGAATACGATTCGATGAGTCACCACCGGATGATTGTCGACAGCC GTGGCTATCCGATGGCGATTGGTCGTCTCTACATTACCCCCGATTGTGAGGGGCAGATACGCTATATGGCGGTGAAAGCC AATCGCCGCTCTAAAGGTATGGGGTCTTTGATTTTGGTCGCTTTGGAGTCCTTAGCGCGCCAAGAAGGCGCCAAGCGTTT AGTGTGTAATGCCCGTGAAGATGCGATTCCGTTTTATGCTAAAAATGGTTTTGAGCGTCGGGGGGAATTAACCGATGAAC GTGGCCCGGTGCGCCATCAACAAATGGTGAAAACCCTCGACCCGATGGCCAATGTGCTGCGTAAGCCGGAGTGGTGTACG GAACTGCAAGATCGCTGGGGCAAGCATATTCCGATCAGCGATAAGATGGGGATCAAGATCCAGCAATACACGGGCTACCA ATTCCAGTGCTGCGCGCAGCTTAATCCGAATCTCAACCCACATAACACTTTATTTGCTGGTTCGGCGTTTACCCTCGCCA CCTTGACTGGTTGGGGAATGGCGTGGCTATTAATGCGTGAGCGCGATCTGCAGGGGGATATTGTGTTGGTGGATAGTCAT ATTCGTTATCGCCACCCTGTAGTGCAAAATCCGGTGGCATCGACGTCGCTTGATGGGATCAGTGGCGATTTAGATCGCTT AGAGTCAGGGCGCAAAGCACGTATTGTCGTACGGGTTATCATCTCCAGCGGAGAGGTTGAAGCGATTGAGTTTATTGGGA CCTATATGCTAATCCCGAACTACAAAGCGTTGGTGGCGCAAAAATCGTCATAG
Upstream 100 bases:
>100_bases TGATGGGCCGGTGACGTTTTGGCTACAGGCTTAATTTGCCTCGTGTTACCAAATGAATAACCAAGCGTGTCTTGCGTAAG GTAAGGCACCTGTTCAGGGA
Downstream 100 bases:
>100_bases CTTCACCGAGTTCATCGCTTCCAGTGCAAGTTCGCAGCGCATTATGGCGCGCTGCGACAATCTTGACTGACTAATTCCGC TTGTTGGAAATCCCAGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MSMFKLITPTTDNQLNKYFHFRWQMLREPWRMPIGSERDEYDSMSHHRMIVDSRGYPMAIGRLYITPDCEGQIRYMAVKA NRRSKGMGSLILVALESLARQEGAKRLVCNAREDAIPFYAKNGFERRGELTDERGPVRHQQMVKTLDPMANVLRKPEWCT ELQDRWGKHIPISDKMGIKIQQYTGYQFQCCAQLNPNLNPHNTLFAGSAFTLATLTGWGMAWLLMRERDLQGDIVLVDSH IRYRHPVVQNPVASTSLDGISGDLDRLESGRKARIVVRVIISSGEVEAIEFIGTYMLIPNYKALVAQKSS
Sequences:
>Translated_310_residues MSMFKLITPTTDNQLNKYFHFRWQMLREPWRMPIGSERDEYDSMSHHRMIVDSRGYPMAIGRLYITPDCEGQIRYMAVKA NRRSKGMGSLILVALESLARQEGAKRLVCNAREDAIPFYAKNGFERRGELTDERGPVRHQQMVKTLDPMANVLRKPEWCT ELQDRWGKHIPISDKMGIKIQQYTGYQFQCCAQLNPNLNPHNTLFAGSAFTLATLTGWGMAWLLMRERDLQGDIVLVDSH IRYRHPVVQNPVASTSLDGISGDLDRLESGRKARIVVRVIISSGEVEAIEFIGTYMLIPNYKALVAQKSS >Mature_309_residues SMFKLITPTTDNQLNKYFHFRWQMLREPWRMPIGSERDEYDSMSHHRMIVDSRGYPMAIGRLYITPDCEGQIRYMAVKAN RRSKGMGSLILVALESLARQEGAKRLVCNAREDAIPFYAKNGFERRGELTDERGPVRHQQMVKTLDPMANVLRKPEWCTE LQDRWGKHIPISDKMGIKIQQYTGYQFQCCAQLNPNLNPHNTLFAGSAFTLATLTGWGMAWLLMRERDLQGDIVLVDSHI RYRHPVVQNPVASTSLDGISGDLDRLESGRKARIVVRVIISSGEVEAIEFIGTYMLIPNYKALVAQKSS
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1790321, Length=300, Percent_Identity=49.6666666666667, Blast_Score=318, Evalue=2e-88,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR012660 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF09500 YiiD_Cterm [H]
EC number: NA
Molecular weight: Translated: 35496; Mature: 35364
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMFKLITPTTDNQLNKYFHFRWQMLREPWRMPIGSERDEYDSMSHHRMIVDSRGYPMAI CCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEECCCCCEEE GRLYITPDCEGQIRYMAVKANRRSKGMGSLILVALESLARQEGAKRLVCNAREDAIPFYA EEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH KNGFERRGELTDERGPVRHQQMVKTLDPMANVLRKPEWCTELQDRWGKHIPISDKMGIKI CCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEE QQYTGYQFQCCAQLNPNLNPHNTLFAGSAFTLATLTGWGMAWLLMRERDLQGDIVLVDSH EEECCCEEEEEEECCCCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEECC IRYRHPVVQNPVASTSLDGISGDLDRLESGRKARIVVRVIISSGEVEAIEFIGTYMLIPN CEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEEECCCCEEEEEEHHHEEECCC YKALVAQKSS CCEEEEECCC >Mature Secondary Structure SMFKLITPTTDNQLNKYFHFRWQMLREPWRMPIGSERDEYDSMSHHRMIVDSRGYPMAI CCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCEEEEECCCCCEEE GRLYITPDCEGQIRYMAVKANRRSKGMGSLILVALESLARQEGAKRLVCNAREDAIPFYA EEEEECCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHH KNGFERRGELTDERGPVRHQQMVKTLDPMANVLRKPEWCTELQDRWGKHIPISDKMGIKI CCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEE QQYTGYQFQCCAQLNPNLNPHNTLFAGSAFTLATLTGWGMAWLLMRERDLQGDIVLVDSH EEECCCEEEEEEECCCCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHCCCCCCEEEEECC IRYRHPVVQNPVASTSLDGISGDLDRLESGRKARIVVRVIISSGEVEAIEFIGTYMLIPN CEECCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEEECCCCEEEEEEHHHEEECCC YKALVAQKSS CCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]