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The map label for this gene is hsdM [C]

Identifier: 147674983

GI number: 147674983

Start: 1466731

End: 1469112

Strand: Reverse

Name: hsdM [C]

Synonym: VC0395_A1367

Alternate gene names: 147674983

Gene position: 1469112-1466731 (Counterclockwise)

Preceding gene: 147674006

Following gene: 147674628

Centisome position: 48.58

GC content: 43.87

Gene sequence:

>2382_bases
ATGGACCACTCAGTACATAACAAACTCGTTTCATTTATTTGGTCGATTGCCGACGACTGTCTTCGTGATGTCTATGTTCG
TGGTAAATACCGCGACGTTATCTTGCCTATGGTGGTGCTACGCCGTCTGGATACGCTTTTGGAGCCATCAAAAGAAGCAG
TACTGGAAGAAGTCAGATTCCAAAAAGAAGAGATGAATGAAATTGAGCTTGATGACGCACCATTATGCGCTACATCAGGT
TATGTGTTCTACAACACGTCCAAGTGGACTCTGCAAACGCTATTCAGTACAGCGACTAACAACCAACAGATTCTGCTGGC
TAACTTCGAAGATTACCTCAACGGTTTTAGCGAAAACGTAAAAGAGATTGTTGAGTGTTTTAACCTGAAAGCCCAAATCC
GTCACATGGCAGGGAAAGACGTTCTGCTAGATGTGGTTGAGAAATTCGTCTCGCCGTACATCAACTTAACGCCAGCGGTT
AAAGAAGATCCTGAGGGTAACAAACTACCAGCACTCAGCAACCTTGGTATGGGCTATGTATTTGAAGAATTGATTCGTAA
GTTCAACGAAGAGAACAACGAAGAGGCGGGGGAGCACTTTACTCCGCGTGAAGTGATCGAGCTGATGACGCACCTTGTTT
TCGATCCAATCAAAGATAACTTGCCACTTTCTATCACAGTGTATGACCCAGCATGTGGTAGTGGCGGTATGCTGACAGAA
ACGCAAAACTTTGTTGAAGAGAAATACCCAGCATCAAACCGTGATATCTACCTTTACGGTAAAGAGATCAACGATGAGAC
TTACGCTATCTGTAAGTCAGATATGATGATCAAAGGTAACAACCCAGAAAACATCCGTGTAGGTTCAACCCTTTCCACTG
ACGAATTCTCATCTAATCGCTTCGATTTCATGCTCTCTAACCCGCCTTATGGTAAGAGCTGGGCGAGTGAGCAAAAGCAC
ATCAAAGAAGGCAAAGAAGTCGTTGATGGTCGCTTTAAAGTGAAGTTAAAAGATTACTGGGGTGTAGAGAGCGAGCAAGA
AGCGATACCACGCTCAAGTGATGGCCAGTTACTGTTCCTGATGGAAATGGTCACCAAAATGAAGTCGCCGCAAGACAGCC
CATTGGGTTCACGCATTGCGTCCGTTCACAATGGTTCAAGCTTGTTTACCGGTGATGCGGGTAGTGGTGAAAGTAATATT
CGTCGTTTCATCATAGAAAATGACATGCTGGATGCGATTGTTCAGTTGCCAAACAACCTGTTCTACAACACGGGTATTAC
CACGTACATCTGGCTGCTCAATAACAACAAACCTGAAAATCGCCAAGGCAAAGTGCAGCTGATTGATGCTAGCTTACTGT
TCCGTAAGTTGCGTAAGAACTTGGGTAATAAAAACTGCGAATTTTCGCCAGAGCACATTGCGGAAATTGTCTCGACCTAT
CTTGAGAATCAATCTGTTGAACGTGCTATTGATGAGAAAGGCGATCCGGTCGGTATTGCCGCGCAAGTATTCAAGAACCA
AGATTTTGGTTACTACAAAGTCAATATTGAGCGCCCAGATCGCCGAAATGCCCAATTCCGCGCTGACTTAATTGAGCCGT
TACGTTTTGAAAACTCACAGCGTGAAGTCATGGAGTACTTGTACGCCGAATATGGCGAGCAAGTCTATGACGCAGGTTTT
GTTAAAGGGATTGAAAAAGAGATCACCAAGTGGTGTGAAGAAAATGATATCAGCCTAAACAAAGCGGCAAAAACCAAGTT
GCTGGATACGAAAAACTGGATTAAACAACGCACACTGGTGAATGTAGCGAGTCAATTACACAAAAAGATCGGTGACGAAG
TTTACAACGACTTTAACCAGTTCAAACAATTAGTAGATGCAGAACTTACATCACTCGGCCTTAAGCTTTCAGCACCAGAA
AAGAAAGCCATCTTGGATGCGGTAAGCTGGTATGACGAAAATGCAGAAAAAGTCATCAAGAAAGTCGCCAAGCTAAAGCA
AGATAAGTTAGACGAACTGCTAGAAAACTACGAATGTGAACTGCAAGATTTGCCAGATTTCGGGTACTACCCAACGGGCA
ACCACAACGAGTTCGTGACTTATGAATCAAGTTCAGACTTGCGTGATAGCGAATCCGTTCCACTTGAGCAAAGCATTTAC
CAATACTTCCTTGATGAAGTAAAGCCGCATGTAGATGAAGCTTGGATAAATCTTGAATCAGTCAAGATTGGTTATGAGAT
CAGCTTTAACAAGTACTTCTATCGCCATAAGCCACTGCGCTCAATGGATGAGGTCGCTGGTGACATTATTGCGCTTGAAC
AAAAAGCGGAAGGCTTAATTGCTGACATTTTGGGCATCTCTGTGGCTAAGGTTCAGGGGTAA

Upstream 100 bases:

>100_bases
ATGTTTTATTCGCTACTAGTGCCAAAAGTCAGTAAAATTCTGCCCAATCATCCCTATTATTGTTTGAATTTCAAGCAACT
ATTGCTTTAAGAAGAAAATT

Downstream 100 bases:

>100_bases
GCTGATGAGCAATACTATGATTAAGAAGATGCCCAAATACGAGTCTTACAAAGACTCTTGTGAGCAATGGATTGGTGACA
TCCCCGCTCATTGGGAAGTT

Product: putative DNA methylase HsdM

Products: NA

Alternate protein names: M.MjaXP [H]

Number of amino acids: Translated: 793; Mature: 793

Protein sequence:

>793_residues
MDHSVHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMVVLRRLDTLLEPSKEAVLEEVRFQKEEMNEIELDDAPLCATSG
YVFYNTSKWTLQTLFSTATNNQQILLANFEDYLNGFSENVKEIVECFNLKAQIRHMAGKDVLLDVVEKFVSPYINLTPAV
KEDPEGNKLPALSNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPIKDNLPLSITVYDPACGSGGMLTE
TQNFVEEKYPASNRDIYLYGKEINDETYAICKSDMMIKGNNPENIRVGSTLSTDEFSSNRFDFMLSNPPYGKSWASEQKH
IKEGKEVVDGRFKVKLKDYWGVESEQEAIPRSSDGQLLFLMEMVTKMKSPQDSPLGSRIASVHNGSSLFTGDAGSGESNI
RRFIIENDMLDAIVQLPNNLFYNTGITTYIWLLNNNKPENRQGKVQLIDASLLFRKLRKNLGNKNCEFSPEHIAEIVSTY
LENQSVERAIDEKGDPVGIAAQVFKNQDFGYYKVNIERPDRRNAQFRADLIEPLRFENSQREVMEYLYAEYGEQVYDAGF
VKGIEKEITKWCEENDISLNKAAKTKLLDTKNWIKQRTLVNVASQLHKKIGDEVYNDFNQFKQLVDAELTSLGLKLSAPE
KKAILDAVSWYDENAEKVIKKVAKLKQDKLDELLENYECELQDLPDFGYYPTGNHNEFVTYESSSDLRDSESVPLEQSIY
QYFLDEVKPHVDEAWINLESVKIGYEISFNKYFYRHKPLRSMDEVAGDIIALEQKAEGLIADILGISVAKVQG

Sequences:

>Translated_793_residues
MDHSVHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMVVLRRLDTLLEPSKEAVLEEVRFQKEEMNEIELDDAPLCATSG
YVFYNTSKWTLQTLFSTATNNQQILLANFEDYLNGFSENVKEIVECFNLKAQIRHMAGKDVLLDVVEKFVSPYINLTPAV
KEDPEGNKLPALSNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPIKDNLPLSITVYDPACGSGGMLTE
TQNFVEEKYPASNRDIYLYGKEINDETYAICKSDMMIKGNNPENIRVGSTLSTDEFSSNRFDFMLSNPPYGKSWASEQKH
IKEGKEVVDGRFKVKLKDYWGVESEQEAIPRSSDGQLLFLMEMVTKMKSPQDSPLGSRIASVHNGSSLFTGDAGSGESNI
RRFIIENDMLDAIVQLPNNLFYNTGITTYIWLLNNNKPENRQGKVQLIDASLLFRKLRKNLGNKNCEFSPEHIAEIVSTY
LENQSVERAIDEKGDPVGIAAQVFKNQDFGYYKVNIERPDRRNAQFRADLIEPLRFENSQREVMEYLYAEYGEQVYDAGF
VKGIEKEITKWCEENDISLNKAAKTKLLDTKNWIKQRTLVNVASQLHKKIGDEVYNDFNQFKQLVDAELTSLGLKLSAPE
KKAILDAVSWYDENAEKVIKKVAKLKQDKLDELLENYECELQDLPDFGYYPTGNHNEFVTYESSSDLRDSESVPLEQSIY
QYFLDEVKPHVDEAWINLESVKIGYEISFNKYFYRHKPLRSMDEVAGDIIALEQKAEGLIADILGISVAKVQG
>Mature_793_residues
MDHSVHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMVVLRRLDTLLEPSKEAVLEEVRFQKEEMNEIELDDAPLCATSG
YVFYNTSKWTLQTLFSTATNNQQILLANFEDYLNGFSENVKEIVECFNLKAQIRHMAGKDVLLDVVEKFVSPYINLTPAV
KEDPEGNKLPALSNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPIKDNLPLSITVYDPACGSGGMLTE
TQNFVEEKYPASNRDIYLYGKEINDETYAICKSDMMIKGNNPENIRVGSTLSTDEFSSNRFDFMLSNPPYGKSWASEQKH
IKEGKEVVDGRFKVKLKDYWGVESEQEAIPRSSDGQLLFLMEMVTKMKSPQDSPLGSRIASVHNGSSLFTGDAGSGESNI
RRFIIENDMLDAIVQLPNNLFYNTGITTYIWLLNNNKPENRQGKVQLIDASLLFRKLRKNLGNKNCEFSPEHIAEIVSTY
LENQSVERAIDEKGDPVGIAAQVFKNQDFGYYKVNIERPDRRNAQFRADLIEPLRFENSQREVMEYLYAEYGEQVYDAGF
VKGIEKEITKWCEENDISLNKAAKTKLLDTKNWIKQRTLVNVASQLHKKIGDEVYNDFNQFKQLVDAELTSLGLKLSAPE
KKAILDAVSWYDENAEKVIKKVAKLKQDKLDELLENYECELQDLPDFGYYPTGNHNEFVTYESSSDLRDSESVPLEQSIY
QYFLDEVKPHVDEAWINLESVKIGYEISFNKYFYRHKPLRSMDEVAGDIIALEQKAEGLIADILGISVAKVQG

Specific function: Methylation of specific adenine residues; required for both restriction and modification activities [H]

COG id: COG0286

COG function: function code V; Type I restriction-modification system methyltransferase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022749
- InterPro:   IPR003356
- InterPro:   IPR002052
- InterPro:   IPR002296 [H]

Pfam domain/function: PF12161 HsdM_N; PF02384 N6_Mtase [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 90753; Mature: 90753

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHSVHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMVVLRRLDTLLEPSKEAVLEEVRF
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
QKEEMNEIELDDAPLCATSGYVFYNTSKWTLQTLFSTATNNQQILLANFEDYLNGFSENV
HHHHCCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHH
KEIVECFNLKAQIRHMAGKDVLLDVVEKFVSPYINLTPAVKEDPEGNKLPALSNLGMGYV
HHHHHHHCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCHHHH
FEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPIKDNLPLSITVYDPACGSGGMLTE
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHH
TQNFVEEKYPASNRDIYLYGKEINDETYAICKSDMMIKGNNPENIRVGSTLSTDEFSSNR
HHHHHHHHCCCCCCEEEEEECCCCCCHHEEECCCEEEECCCCCCEEECCCCCCCCCCCCC
FDFMLSNPPYGKSWASEQKHIKEGKEVVDGRFKVKLKDYWGVESEQEAIPRSSDGQLLFL
CEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEHHCCCCCHHHHCCCCCCCCEEEH
MEMVTKMKSPQDSPLGSRIASVHNGSSLFTGDAGSGESNIRRFIIENDMLDAIVQLPNNL
HHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCE
FYNTGITTYIWLLNNNKPENRQGKVQLIDASLLFRKLRKNLGNKNCEFSPEHIAEIVSTY
EECCCCEEEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LENQSVERAIDEKGDPVGIAAQVFKNQDFGYYKVNIERPDRRNAQFRADLIEPLRFENSQ
HHCHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCH
REVMEYLYAEYGEQVYDAGFVKGIEKEITKWCEENDISLNKAAKTKLLDTKNWIKQRTLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NVASQLHKKIGDEVYNDFNQFKQLVDAELTSLGLKLSAPEKKAILDAVSWYDENAEKVIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHCCCHHHHHH
KVAKLKQDKLDELLENYECELQDLPDFGYYPTGNHNEFVTYESSSDLRDSESVPLEQSIY
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHH
QYFLDEVKPHVDEAWINLESVKIGYEISFNKYFYRHKPLRSMDEVAGDIIALEQKAEGLI
HHHHHHHCCCHHHHHEEEEEEEEEEEEEECHHHHHCCCHHHHHHHHHHHEEHHHHHHHHH
ADILGISVAKVQG
HHHHHCHHHHCCC
>Mature Secondary Structure
MDHSVHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMVVLRRLDTLLEPSKEAVLEEVRF
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
QKEEMNEIELDDAPLCATSGYVFYNTSKWTLQTLFSTATNNQQILLANFEDYLNGFSENV
HHHHCCCCCCCCCCEEEECCEEEEECCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHH
KEIVECFNLKAQIRHMAGKDVLLDVVEKFVSPYINLTPAVKEDPEGNKLPALSNLGMGYV
HHHHHHHCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHCCCHHHH
FEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPIKDNLPLSITVYDPACGSGGMLTE
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHH
TQNFVEEKYPASNRDIYLYGKEINDETYAICKSDMMIKGNNPENIRVGSTLSTDEFSSNR
HHHHHHHHCCCCCCEEEEEECCCCCCHHEEECCCEEEECCCCCCEEECCCCCCCCCCCCC
FDFMLSNPPYGKSWASEQKHIKEGKEVVDGRFKVKLKDYWGVESEQEAIPRSSDGQLLFL
CEEEECCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEHHCCCCCHHHHCCCCCCCCEEEH
MEMVTKMKSPQDSPLGSRIASVHNGSSLFTGDAGSGESNIRRFIIENDMLDAIVQLPNNL
HHHHHHHCCCCCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCE
FYNTGITTYIWLLNNNKPENRQGKVQLIDASLLFRKLRKNLGNKNCEFSPEHIAEIVSTY
EECCCCEEEEEEEECCCCCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LENQSVERAIDEKGDPVGIAAQVFKNQDFGYYKVNIERPDRRNAQFRADLIEPLRFENSQ
HHCHHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCH
REVMEYLYAEYGEQVYDAGFVKGIEKEITKWCEENDISLNKAAKTKLLDTKNWIKQRTLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NVASQLHKKIGDEVYNDFNQFKQLVDAELTSLGLKLSAPEKKAILDAVSWYDENAEKVIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHCCCHHHHHH
KVAKLKQDKLDELLENYECELQDLPDFGYYPTGNHNEFVTYESSSDLRDSESVPLEQSIY
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHH
QYFLDEVKPHVDEAWINLESVKIGYEISFNKYFYRHKPLRSMDEVAGDIIALEQKAEGLI
HHHHHHHCCCHHHHHEEEEEEEEEEEEEECHHHHHCCCHHHHHHHHHHHEEHHHHHHHHH
ADILGISVAKVQG
HHHHHCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]