| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147674006
Identifier: 147674006
GI number: 147674006
Start: 1469253
End: 1471316
Strand: Reverse
Name: 147674006
Synonym: VC0395_A1368
Alternate gene names: NA
Gene position: 1471316-1469253 (Counterclockwise)
Preceding gene: 147673329
Following gene: 147674983
Centisome position: 48.65
GC content: 41.67
Gene sequence:
>2064_bases ATGGTTACACCACAGCTAGAACCTTCCTCGCAGGGGCCCTTATCAACCTTAATTGAACAAATATCAATTGATACTGATTG GGTTGATAGAAGCTTCGCGATTTACTGTGTCAGTTATAAAGGCATAGACTTCTCAGAACGACCTAAGCGTTTGGTGACAT TGGCGTCTGAAACCTATAAATCAGGAAGTGTCTATTGCTTAGTCAAAGGTGCCAATAAAGAAGCGTGTTATTGGGTGTTG TTACCAAAGGATTCAAAGTTAGATCTCAAAGATACGTCTTTGGCCATTAAACCAAGTAGTGCTGCCGAGCTACCTACATG GCAGTTGGCTCGTTTATTGATTAAAGCGATACCCAAAGTATTGAGTGGCACAATGCCTGAGATAAAGCGCTTTGAAAGTG AAGGTTTGTATTATTTAGTCAAAAGCAAAAAGTTACCGAAAGATCACTCTGGCTATGAATTAACGACCGTCGAAATCGAC TTAGCTCCATGTGCAGCACTTGGATTCAAACAAACACTTTCAATGGGCACTAAAACATTTTCTCCCTTGTCTTGGTTTAC GCTAGAGAACGGAGAAGTACAAAAAAAGGCAAGGTTTGCTACACGTTATCAACTTGACGATGTTGGGAAGTTGGTCAGTA AATCCATAAAGGGCGACTACATCAAGAAGCCGCTTTACTCTAATGCGAAGAATCGAATTCAGGCAATTGATATCACCAAA GAATCTTATAGCGGTTTTCAATTATCTAAGGTCGGTATTCTTGAACAGTTTATGCAAGATCTTAAGCAAGCTTATGGTGA TTCAGTATCCGTGAAGTTGCAGCGGATTCCCGGGGAAAAGCACAGATTTGTTTCAGATACGATTGTCAAAAATCACTATG TAGGGCTGTTTGATGCGTTGAAAGAGCATCGTTTGGTGATCTGTGATTTAACCGAAAACCAAGACACAGACGCTGCATTA ACCTTGCTTCATGGTATCGAGCATCTAGATATAAATGCAGAAATAGCTGAAGTTCCGATTCGTGGGGCATTGAATATCCT AATTGTTGGTAATAAAGACACCTACAAGTCAGATGAAGAAGACCCGTATCAGGTTTATCGCAAGAAGTACCAAGATACGG TTTTCCAGTCGTGTTACCCAGAGCGCTTATGGAACCGTCAAGGCCAGCCAAACCGCCATGTGGTGGAAGTGCTGTTAAAA GAACTACTTATCAAGCTAGAAGTCCATACAAGAAAACATTTGATTGAGTACCCAAGTGGGCCTGAAAGATGTGTGTATTA CATGCCTCAGCGACCAAAAGACGAGTCTTCAGAGGTTCGAGACGAGCCGTGGCCAGTGTATGCGTCTAAGTTAGTTGGCG ATGAATGGCAATATACACAAGCGACCCAAGAGGAGCTTGAAGATATTGAACTCGATTTAGGTAATGATAAAAGGCATGTA TTTCATGGGTTTGAACGTTCTCCTGTTATTTATTGGCCGGAGACGGGGGACTATGCCATTTTCATTGACACTGGCATTCA AATGCTTCCGGAATTTGAAGCGGTTGCAGAGCGATTGCGTGAACTCAAAGAAGGGCGATCACAAGATGTCCCGATTGCAT TGTTGGCTCAGTTCATTGAAGAAAACCCAGAGAGTAAAGTAATAAACAAACTGAGAGCGATATTGTCAGAGTGGGATGAT GTAGCACCTCTACCGTTTGATGAGTTTTCTACAATCGCGTACAAAAGCAGTGATGAAAAACAATTCTATGATTGGCTGCG TGAACAAGGATTCTTTTTAAAAACATCGATAAGAGGGCAAAGTGAGGGATTCTTTAATGCATCTTTAGGATTCTTCTATA ACCGAGAGCAGGGGATGTACTTTGCTGGTGGTAAAGGCAGCCCACAAAGTAAAATCGAGACCTTTAGCCATTTATACCTG ATAAAACATTCGTTTGATGCACTACCTGAAGAGGTAGAAAACTTGTTTGACGTTTATCACTTAAGGCATCGCTTACCAAC CGTAACGCCTTATCCATTTAAGCATCTACGTGAGTATGTTGAGATGCAGCGTTTTAGATCTTGA
Upstream 100 bases:
>100_bases TAGAAACCTCACCACAGTTAGCTAAAGTTATTGAGATTCCGGCACTAATTGATGATAGCAATGCCGACACCAACCGAACA GCAGTACAGGAGTTGATAAA
Downstream 100 bases:
>100_bases TAGCAGACTAAACCACGGTGCTAGTAACGAGCAGAAACGCATGTTTTATTCGCTACTAGTGCCAAAAGTCAGTAAAATTC TGCCCAATCATCCCTATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 687; Mature: 687
Protein sequence:
>687_residues MVTPQLEPSSQGPLSTLIEQISIDTDWVDRSFAIYCVSYKGIDFSERPKRLVTLASETYKSGSVYCLVKGANKEACYWVL LPKDSKLDLKDTSLAIKPSSAAELPTWQLARLLIKAIPKVLSGTMPEIKRFESEGLYYLVKSKKLPKDHSGYELTTVEID LAPCAALGFKQTLSMGTKTFSPLSWFTLENGEVQKKARFATRYQLDDVGKLVSKSIKGDYIKKPLYSNAKNRIQAIDITK ESYSGFQLSKVGILEQFMQDLKQAYGDSVSVKLQRIPGEKHRFVSDTIVKNHYVGLFDALKEHRLVICDLTENQDTDAAL TLLHGIEHLDINAEIAEVPIRGALNILIVGNKDTYKSDEEDPYQVYRKKYQDTVFQSCYPERLWNRQGQPNRHVVEVLLK ELLIKLEVHTRKHLIEYPSGPERCVYYMPQRPKDESSEVRDEPWPVYASKLVGDEWQYTQATQEELEDIELDLGNDKRHV FHGFERSPVIYWPETGDYAIFIDTGIQMLPEFEAVAERLRELKEGRSQDVPIALLAQFIEENPESKVINKLRAILSEWDD VAPLPFDEFSTIAYKSSDEKQFYDWLREQGFFLKTSIRGQSEGFFNASLGFFYNREQGMYFAGGKGSPQSKIETFSHLYL IKHSFDALPEEVENLFDVYHLRHRLPTVTPYPFKHLREYVEMQRFRS
Sequences:
>Translated_687_residues MVTPQLEPSSQGPLSTLIEQISIDTDWVDRSFAIYCVSYKGIDFSERPKRLVTLASETYKSGSVYCLVKGANKEACYWVL LPKDSKLDLKDTSLAIKPSSAAELPTWQLARLLIKAIPKVLSGTMPEIKRFESEGLYYLVKSKKLPKDHSGYELTTVEID LAPCAALGFKQTLSMGTKTFSPLSWFTLENGEVQKKARFATRYQLDDVGKLVSKSIKGDYIKKPLYSNAKNRIQAIDITK ESYSGFQLSKVGILEQFMQDLKQAYGDSVSVKLQRIPGEKHRFVSDTIVKNHYVGLFDALKEHRLVICDLTENQDTDAAL TLLHGIEHLDINAEIAEVPIRGALNILIVGNKDTYKSDEEDPYQVYRKKYQDTVFQSCYPERLWNRQGQPNRHVVEVLLK ELLIKLEVHTRKHLIEYPSGPERCVYYMPQRPKDESSEVRDEPWPVYASKLVGDEWQYTQATQEELEDIELDLGNDKRHV FHGFERSPVIYWPETGDYAIFIDTGIQMLPEFEAVAERLRELKEGRSQDVPIALLAQFIEENPESKVINKLRAILSEWDD VAPLPFDEFSTIAYKSSDEKQFYDWLREQGFFLKTSIRGQSEGFFNASLGFFYNREQGMYFAGGKGSPQSKIETFSHLYL IKHSFDALPEEVENLFDVYHLRHRLPTVTPYPFKHLREYVEMQRFRS >Mature_687_residues MVTPQLEPSSQGPLSTLIEQISIDTDWVDRSFAIYCVSYKGIDFSERPKRLVTLASETYKSGSVYCLVKGANKEACYWVL LPKDSKLDLKDTSLAIKPSSAAELPTWQLARLLIKAIPKVLSGTMPEIKRFESEGLYYLVKSKKLPKDHSGYELTTVEID LAPCAALGFKQTLSMGTKTFSPLSWFTLENGEVQKKARFATRYQLDDVGKLVSKSIKGDYIKKPLYSNAKNRIQAIDITK ESYSGFQLSKVGILEQFMQDLKQAYGDSVSVKLQRIPGEKHRFVSDTIVKNHYVGLFDALKEHRLVICDLTENQDTDAAL TLLHGIEHLDINAEIAEVPIRGALNILIVGNKDTYKSDEEDPYQVYRKKYQDTVFQSCYPERLWNRQGQPNRHVVEVLLK ELLIKLEVHTRKHLIEYPSGPERCVYYMPQRPKDESSEVRDEPWPVYASKLVGDEWQYTQATQEELEDIELDLGNDKRHV FHGFERSPVIYWPETGDYAIFIDTGIQMLPEFEAVAERLRELKEGRSQDVPIALLAQFIEENPESKVINKLRAILSEWDD VAPLPFDEFSTIAYKSSDEKQFYDWLREQGFFLKTSIRGQSEGFFNASLGFFYNREQGMYFAGGKGSPQSKIETFSHLYL IKHSFDALPEEVENLFDVYHLRHRLPTVTPYPFKHLREYVEMQRFRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79094; Mature: 79094
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTPQLEPSSQGPLSTLIEQISIDTDWVDRSFAIYCVSYKGIDFSERPKRLVTLASETYK CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCHHHEEEHHHHCC SGSVYCLVKGANKEACYWVLLPKDSKLDLKDTSLAIKPSSAAELPTWQLARLLIKAIPKV CCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH LSGTMPEIKRFESEGLYYLVKSKKLPKDHSGYELTTVEIDLAPCAALGFKQTLSMGTKTF HCCCCHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCC SPLSWFTLENGEVQKKARFATRYQLDDVGKLVSKSIKGDYIKKPLYSNAKNRIQAIDITK CCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCHHCCHHCCEEEEEEEC ESYSGFQLSKVGILEQFMQDLKQAYGDSVSVKLQRIPGEKHRFVSDTIVKNHYVGLFDAL CCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH KEHRLVICDLTENQDTDAALTLLHGIEHLDINAEIAEVPIRGALNILIVGNKDTYKSDEE HHCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHEECCCCCCEEEEEECCCCCCCCCCC DPYQVYRKKYQDTVFQSCYPERLWNRQGQPNRHVVEVLLKELLIKLEVHTRKHLIEYPSG CHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PERCVYYMPQRPKDESSEVRDEPWPVYASKLVGDEWQYTQATQEELEDIELDLGNDKRHV CCCEEEECCCCCCCCCHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHEEECCCCCCHHH FHGFERSPVIYWPETGDYAIFIDTGIQMLPEFEAVAERLRELKEGRSQDVPIALLAQFIE HCCCCCCCEEECCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ENPESKVINKLRAILSEWDDVAPLPFDEFSTIAYKSSDEKQFYDWLREQGFFLKTSIRGQ CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCEEEEECCCC SEGFFNASLGFFYNREQGMYFAGGKGSPQSKIETFSHLYLIKHSFDALPEEVENLFDVYH CCCCEEECCCEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LRHRLPTVTPYPFKHLREYVEMQRFRS HHHHCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MVTPQLEPSSQGPLSTLIEQISIDTDWVDRSFAIYCVSYKGIDFSERPKRLVTLASETYK CCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCHHHEEEHHHHCC SGSVYCLVKGANKEACYWVLLPKDSKLDLKDTSLAIKPSSAAELPTWQLARLLIKAIPKV CCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHH LSGTMPEIKRFESEGLYYLVKSKKLPKDHSGYELTTVEIDLAPCAALGFKQTLSMGTKTF HCCCCHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCC SPLSWFTLENGEVQKKARFATRYQLDDVGKLVSKSIKGDYIKKPLYSNAKNRIQAIDITK CCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCHHCCHHCCEEEEEEEC ESYSGFQLSKVGILEQFMQDLKQAYGDSVSVKLQRIPGEKHRFVSDTIVKNHYVGLFDAL CCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH KEHRLVICDLTENQDTDAALTLLHGIEHLDINAEIAEVPIRGALNILIVGNKDTYKSDEE HHCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHEECCCCCCEEEEEECCCCCCCCCCC DPYQVYRKKYQDTVFQSCYPERLWNRQGQPNRHVVEVLLKELLIKLEVHTRKHLIEYPSG CHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PERCVYYMPQRPKDESSEVRDEPWPVYASKLVGDEWQYTQATQEELEDIELDLGNDKRHV CCCEEEECCCCCCCCCHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHEEECCCCCCHHH FHGFERSPVIYWPETGDYAIFIDTGIQMLPEFEAVAERLRELKEGRSQDVPIALLAQFIE HCCCCCCCEEECCCCCCEEEEEECCHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ENPESKVINKLRAILSEWDDVAPLPFDEFSTIAYKSSDEKQFYDWLREQGFFLKTSIRGQ CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCEEEEECCCC SEGFFNASLGFFYNREQGMYFAGGKGSPQSKIETFSHLYLIKHSFDALPEEVENLFDVYH CCCCEEECCCEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LRHRLPTVTPYPFKHLREYVEMQRFRS HHHHCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA