| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
Click here to switch to the map view.
The map label for this gene is luxU
Identifier: 147674934
GI number: 147674934
Start: 582355
End: 582696
Strand: Direct
Name: luxU
Synonym: VC0395_A0543
Alternate gene names: 147674934
Gene position: 582355-582696 (Clockwise)
Preceding gene: 147673171
Following gene: 147674357
Centisome position: 19.26
GC content: 46.49
Gene sequence:
>342_bases ATGAGAGAATGGATCAACCAAAGCAAAATCGACTTACTGGCGAAGGAGATCGGTGAAGAAAACGTGCCGATCTTGGTCAA CATTTTTCTTGGTGAACTCAATGATTACCAAAGTAAGTTAGTCAGTGATACGGTCGCGGACAAACTCGGGTATCTCAAGG AAATCAGCCATGCGCTGAAAAGCAGTGCGGCCAGTTTTGGGGCTGATCGCTTGTGCGCCAAAGCGGTGGAGTTAGATAGT CGCGCCAAATCTGGCGAGATGATGGACATCTCGCTAGAGGTTGAACATATGCTTGAGTTACTGAAGCAGACGCATCAATG CTACTCCGATTTAGTTCATTAA
Upstream 100 bases:
>100_bases CCGTGCCGCAACCTATCTGGATGTCAGCCCGTCAACCATCTATCGCAAGCTGCAAACTTGGAATGAAAAAGTGAAAGAAA AAGAGAAGGAACGGTAAGCG
Downstream 100 bases:
>100_bases CTGCTCTTCGATAGCTTGTCTCAGCTTCTGCCGATCATGACGCCAGTCGCGGTTGGCGGAAGCCAAATCTCGGGTAACAA AATTCCAACGCTGTTCTAAC
Product: phosphorelay protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MREWINQSKIDLLAKEIGEENVPILVNIFLGELNDYQSKLVSDTVADKLGYLKEISHALKSSAASFGADRLCAKAVELDS RAKSGEMMDISLEVEHMLELLKQTHQCYSDLVH
Sequences:
>Translated_113_residues MREWINQSKIDLLAKEIGEENVPILVNIFLGELNDYQSKLVSDTVADKLGYLKEISHALKSSAASFGADRLCAKAVELDS RAKSGEMMDISLEVEHMLELLKQTHQCYSDLVH >Mature_113_residues MREWINQSKIDLLAKEIGEENVPILVNIFLGELNDYQSKLVSDTVADKLGYLKEISHALKSSAASFGADRLCAKAVELDS RAKSGEMMDISLEVEHMLELLKQTHQCYSDLVH
Specific function: Phosphorelay protein which receives sensory signals from a sensory kinase and transmit them to luxO. At low cell density, a phosphoryl group is transferred from the sensory kinase, probably on His-57 and this phosphoryl group is further transferred to lux
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPt domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LUXU_VIBCH (Q9KT83)
Other databases:
- EMBL: AE003852 - PIR: D82250 - RefSeq: NP_230667.1 - ProteinModelPortal: Q9KT83 - SMR: Q9KT83 - GeneID: 2614292 - GenomeReviews: AE003852_GR - KEGG: vch:VC1022 - TIGR: VC_1022 - HOGENOM: HBG303381 - OMA: REISHCL - ProtClustDB: CLSK874183 - InterPro: IPR008207 - Gene3D: G3DSA:1.20.120.160
Pfam domain/function: PF01627 Hpt; SSF47226 Hpt
EC number: NA
Molecular weight: Translated: 12679; Mature: 12679
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS50894 HPT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREWINQSKIDLLAKEIGEENVPILVNIFLGELNDYQSKLVSDTVADKLGYLKEISHALK CCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSAASFGADRLCAKAVELDSRAKSGEMMDISLEVEHMLELLKQTHQCYSDLVH HHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MREWINQSKIDLLAKEIGEENVPILVNIFLGELNDYQSKLVSDTVADKLGYLKEISHALK CCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSAASFGADRLCAKAVELDSRAKSGEMMDISLEVEHMLELLKQTHQCYSDLVH HHHHHCCHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301; 12176318