| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is cheB-2
Identifier: 147674819
GI number: 147674819
Start: 1769557
End: 1770690
Strand: Reverse
Name: cheB-2
Synonym: VC0395_A1650
Alternate gene names: 147674819
Gene position: 1770690-1769557 (Counterclockwise)
Preceding gene: 147674329
Following gene: 147675595
Centisome position: 58.55
GC content: 48.85
Gene sequence:
>1134_bases ATGGCGATTAAAGTATTAGTTGTTGATGATTCGAGTTTTTTCCGTCGTCGCGTGAGTGAAATCATCAACTCCGAATCGCG CTTAGAAGTCATTGATGTTGCTGTAAATGGGAAAGAGGCCGTAGAAAAGGCCGCTCGACTCAAGCCAGATGTGATCACTA TGGATATAGAAATGCCCGTCATGGACGGTATTTCCGCTGTCCGAGAAATCATGGCAAACAATCCCGTGCCCATTTTGATG TTCTCTTCATTGACCCATGATGGCGCAAAAGCCACATTGGATGCACTGGATGCTGGCGCGTTAGACTTTTTACCTAAGAA GTTTGAAGATATCGCGCGCAACCGGGATGAAGCCGTCACACTGTTACAGCAGCGTGTGCTTTCTATTGCATCGAAAAAGA TGTTTCTACGTCGCCCTGCAGCTCCACGCCCTGCGCCTACAACATCAATAGCAGCGAGTTCGTCACTCAGCCAAGAACGA GCGGCAGCTACCTCACCTTTGGGAAACCGACCCTCGACGGCGGTTTCAGCAGCCACTCGTTTTAAAGCTTCGGGTAAAAA ATACCAGTTGACCGCAATAGGAACCTCAACAGGTGGACCTGTAGCCTTGCAAAAAATATTAACTAAGCTCCCCGTAAATT ATCCACACCCCATAGTGTTGATTCAGCATATGCCAGCAACATTTACGGCTGCTTTTGCTAGCCGTCTCAATTCGCTATGC AAAATTGAAGTTAAAGAAGCGGAAGATGGAGATATGCTGCGTCCGGGTGTTGCTTATTTAGCACCGGGTGGTAAGCAGAT GATGCTGGATGGTCGACCCGGTGCGGCTCGCCTACGTATTATCGATGGTGGCGACCGCATGAACTATAAACCGTGTGTGG ATGTTACTTTTGGCTCCGCAGCGAAAATCTTTGGTGACAAAGTACTGTCCATGATTTTGACCGGAATGGGTGCGGATGGA CGTGAAGGTGCACGGATGCTGAAACAAGCAGGAGCCACCATTTGGGCACAAGATGAAGAAAGTTGTGTCGTGTATGGCAT GCCACAAGCTGTCGCTAAAGCAGGAATTTCAACGGAAGATCTACCGCTGGAGAGAATCGCAGAGCGTATGTTGGTAGAAG TCGGGCTCGCCTAA
Upstream 100 bases:
>100_bases GCGATGGTCATATTGCTCTGATTTTGGATGTGCCGGATCTGCTCAAGCAGTATGCAGCTGCTTCTCGCGTCTGATTAGCT GCACAACGATAAGGATAAAC
Downstream 100 bases:
>100_bases GGAACCTCAATGATCGTTTGGAGTGTAGCAAACCAAAAAGGTGGGGTAGGAAAAACCACCACAACGATTACATTGGCAGG CTTATTAAGCCAGCAGGGTA
Product: chemotaxis-specific methylesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MAIKVLVVDDSSFFRRRVSEIINSESRLEVIDVAVNGKEAVEKAARLKPDVITMDIEMPVMDGISAVREIMANNPVPILM FSSLTHDGAKATLDALDAGALDFLPKKFEDIARNRDEAVTLLQQRVLSIASKKMFLRRPAAPRPAPTTSIAASSSLSQER AAATSPLGNRPSTAVSAATRFKASGKKYQLTAIGTSTGGPVALQKILTKLPVNYPHPIVLIQHMPATFTAAFASRLNSLC KIEVKEAEDGDMLRPGVAYLAPGGKQMMLDGRPGAARLRIIDGGDRMNYKPCVDVTFGSAAKIFGDKVLSMILTGMGADG REGARMLKQAGATIWAQDEESCVVYGMPQAVAKAGISTEDLPLERIAERMLVEVGLA
Sequences:
>Translated_377_residues MAIKVLVVDDSSFFRRRVSEIINSESRLEVIDVAVNGKEAVEKAARLKPDVITMDIEMPVMDGISAVREIMANNPVPILM FSSLTHDGAKATLDALDAGALDFLPKKFEDIARNRDEAVTLLQQRVLSIASKKMFLRRPAAPRPAPTTSIAASSSLSQER AAATSPLGNRPSTAVSAATRFKASGKKYQLTAIGTSTGGPVALQKILTKLPVNYPHPIVLIQHMPATFTAAFASRLNSLC KIEVKEAEDGDMLRPGVAYLAPGGKQMMLDGRPGAARLRIIDGGDRMNYKPCVDVTFGSAAKIFGDKVLSMILTGMGADG REGARMLKQAGATIWAQDEESCVVYGMPQAVAKAGISTEDLPLERIAERMLVEVGLA >Mature_376_residues AIKVLVVDDSSFFRRRVSEIINSESRLEVIDVAVNGKEAVEKAARLKPDVITMDIEMPVMDGISAVREIMANNPVPILMF SSLTHDGAKATLDALDAGALDFLPKKFEDIARNRDEAVTLLQQRVLSIASKKMFLRRPAAPRPAPTTSIAASSSLSQERA AATSPLGNRPSTAVSAATRFKASGKKYQLTAIGTSTGGPVALQKILTKLPVNYPHPIVLIQHMPATFTAAFASRLNSLCK IEVKEAEDGDMLRPGVAYLAPGGKQMMLDGRPGAARLRIIDGGDRMNYKPCVDVTFGSAAKIFGDKVLSMILTGMGADGR EGARMLKQAGATIWAQDEESCVVYGMPQAVAKAGISTEDLPLERIAERMLVEVGLA
Specific function: Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain
Homologues:
Organism=Escherichia coli, GI1788192, Length=372, Percent_Identity=37.9032258064516, Blast_Score=235, Evalue=3e-63, Organism=Escherichia coli, GI1788550, Length=136, Percent_Identity=32.3529411764706, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CHEB1_VIBCH (Q9KQD8)
Other databases:
- EMBL: AE003852 - PIR: H82122 - RefSeq: NP_231694.1 - ProteinModelPortal: Q9KQD8 - SMR: Q9KQD8 - GeneID: 2613442 - GenomeReviews: AE003852_GR - KEGG: vch:VC2062 - TIGR: VC_2062 - HOGENOM: HBG705324 - OMA: KMAAELN - ProtClustDB: PRK00742 - BRENDA: 3.1.1.61 - GO: GO:0005737 - GO: GO:0006935 - HAMAP: MF_00099 - InterPro: IPR011006 - InterPro: IPR008248 - InterPro: IPR000673 - InterPro: IPR001789 - Gene3D: G3DSA:3.40.50.180 - PIRSF: PIRSF000876 - SMART: SM00448
Pfam domain/function: PF01339 CheB_methylest; PF00072 Response_reg; SSF52738 Chemotax_RR_pGlu_Me-esterase; SSF52172 CheY_like
EC number: =3.1.1.61
Molecular weight: Translated: 40379; Mature: 40248
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: PS50122 CHEB; PS50110 RESPONSE_REGULATORY
Important sites: ACT_SITE 196-196 ACT_SITE 223-223 ACT_SITE 319-319
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKVLVVDDSSFFRRRVSEIINSESRLEVIDVAVNGKEAVEKAARLKPDVITMDIEMPV CEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHCCCCEEEEEECCCH MDGISAVREIMANNPVPILMFSSLTHDGAKATLDALDAGALDFLPKKFEDIARNRDEAVT HHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH LLQQRVLSIASKKMFLRRPAAPRPAPTTSIAASSSLSQERAAATSPLGNRPSTAVSAATR HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH FKASGKKYQLTAIGTSTGGPVALQKILTKLPVNYPHPIVLIQHMPATFTAAFASRLNSLC HHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHE KIEVKEAEDGDMLRPGVAYLAPGGKQMMLDGRPGAARLRIIDGGDRMNYKPCVDVTFGSA EEEEECCCCCCCCCCCHHEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCCH AKIFGDKVLSMILTGMGADGREGARMLKQAGATIWAQDEESCVVYGMPQAVAKAGISTED HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEECHHHHHHCCCCCCC LPLERIAERMLVEVGLA CCHHHHHHHHHHHHCCC >Mature Secondary Structure AIKVLVVDDSSFFRRRVSEIINSESRLEVIDVAVNGKEAVEKAARLKPDVITMDIEMPV EEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHCCCCEEEEEECCCH MDGISAVREIMANNPVPILMFSSLTHDGAKATLDALDAGALDFLPKKFEDIARNRDEAVT HHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH LLQQRVLSIASKKMFLRRPAAPRPAPTTSIAASSSLSQERAAATSPLGNRPSTAVSAATR HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH FKASGKKYQLTAIGTSTGGPVALQKILTKLPVNYPHPIVLIQHMPATFTAAFASRLNSLC HHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHE KIEVKEAEDGDMLRPGVAYLAPGGKQMMLDGRPGAARLRIIDGGDRMNYKPCVDVTFGSA EEEEECCCCCCCCCCCHHEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCCH AKIFGDKVLSMILTGMGADGREGARMLKQAGATIWAQDEESCVVYGMPQAVAKAGISTED HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEECHHHHHHCCCCCCC LPLERIAERMLVEVGLA CCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301