| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147674789
Identifier: 147674789
GI number: 147674789
Start: 623129
End: 623872
Strand: Direct
Name: 147674789
Synonym: VC0395_A0584
Alternate gene names: NA
Gene position: 623129-623872 (Clockwise)
Preceding gene: 147674297
Following gene: 147673342
Centisome position: 20.61
GC content: 48.92
Gene sequence:
>744_bases ATGATACTGTCTGCCTTACAATTTCTCATCGCGATTCTGTTTTCCATTGTTGCTGCGTATGTGGCAGGTTTGAGTGAGGG CGATATTCCGATCATCGCATTTCTGATCCCTGCTCTCTGGCTATTACCTAAATCAGGATTTTCTAGCGTTGTCATGTTGC TCGCGATGGGGATCTTTGGCCTAACCTTACCACTCCAACCGGTGGCGTTGTCTATCAGTCAGTGGGTGCTTATTCCGCTG TTGATGGTGGCGTTTTCTCCACGTAGTAACTGGGGAGTGATCTTAGTCAGTGCTTTGATTGTACTCACTTTGCAAGTCGG CATCATGGTAACGCAATCGGCGGGCAAACTGGAAGGCTCACCTATGGTGACTGTGGTGCAGATAGTTATGGTGATGTTGA TCTGGTGGGCAGCTCGAGGTTGGAAACCAAATCATGCTCACAGTTGGTGGGCATTGGCTTTAGTGATTCCGCTCTGGGTG GCCGAGCAATTTTATGCGGTCACCCTAGCGTTACTGATAACCGGAATTATTGCTGCATGCGAAAACCTGATCCCCAAAGC AACCCCTTCTTTAAACTGGGGAAGCTTGTTGGGATGGAGCCTACCTTGTGTCAGTTTTGCTGCGTTAGTCGTTTCACCCG CGACAGAAGTGCCCAATCCGGTCTTTGTGGTATGGATCTGCATTTTGGTCACAGCTTGGACCACAGACTATGTATTGAAA AGCACAGAGGAAGCGCACGAATAG
Upstream 100 bases:
>100_bases ACCGGAATTTGGTGAATCACGACAAAGATCTGTTGTAAAAACTGGTCCATAATACAAGTGCCCGAAACAAGTTTACCAAG GATAGGTATAGGGAGTTGGC
Downstream 100 bases:
>100_bases TCCATTGAGTGCATCAAATAGCCAGATGAGAGCCTAATAAAGCATCGGTGGCTCTATGAAATTTATTACCTAAAGTTGAT AGTGGGGTGGGGGTATTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MILSALQFLIAILFSIVAAYVAGLSEGDIPIIAFLIPALWLLPKSGFSSVVMLLAMGIFGLTLPLQPVALSISQWVLIPL LMVAFSPRSNWGVILVSALIVLTLQVGIMVTQSAGKLEGSPMVTVVQIVMVMLIWWAARGWKPNHAHSWWALALVIPLWV AEQFYAVTLALLITGIIAACENLIPKATPSLNWGSLLGWSLPCVSFAALVVSPATEVPNPVFVVWICILVTAWTTDYVLK STEEAHE
Sequences:
>Translated_247_residues MILSALQFLIAILFSIVAAYVAGLSEGDIPIIAFLIPALWLLPKSGFSSVVMLLAMGIFGLTLPLQPVALSISQWVLIPL LMVAFSPRSNWGVILVSALIVLTLQVGIMVTQSAGKLEGSPMVTVVQIVMVMLIWWAARGWKPNHAHSWWALALVIPLWV AEQFYAVTLALLITGIIAACENLIPKATPSLNWGSLLGWSLPCVSFAALVVSPATEVPNPVFVVWICILVTAWTTDYVLK STEEAHE >Mature_247_residues MILSALQFLIAILFSIVAAYVAGLSEGDIPIIAFLIPALWLLPKSGFSSVVMLLAMGIFGLTLPLQPVALSISQWVLIPL LMVAFSPRSNWGVILVSALIVLTLQVGIMVTQSAGKLEGSPMVTVVQIVMVMLIWWAARGWKPNHAHSWWALALVIPLWV AEQFYAVTLALLITGIIAACENLIPKATPSLNWGSLLGWSLPCVSFAALVVSPATEVPNPVFVVWICILVTAWTTDYVLK STEEAHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26725; Mature: 26725
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILSALQFLIAILFSIVAAYVAGLSEGDIPIIAFLIPALWLLPKSGFSSVVMLLAMGIFG CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LTLPLQPVALSISQWVLIPLLMVAFSPRSNWGVILVSALIVLTLQVGIMVTQSAGKLEGS HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCC PMVTVVQIVMVMLIWWAARGWKPNHAHSWWALALVIPLWVAEQFYAVTLALLITGIIAAC CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENLIPKATPSLNWGSLLGWSLPCVSFAALVVSPATEVPNPVFVVWICILVTAWTTDYVLK HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH STEEAHE CCHHCCC >Mature Secondary Structure MILSALQFLIAILFSIVAAYVAGLSEGDIPIIAFLIPALWLLPKSGFSSVVMLLAMGIFG CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LTLPLQPVALSISQWVLIPLLMVAFSPRSNWGVILVSALIVLTLQVGIMVTQSAGKLEGS HCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCC PMVTVVQIVMVMLIWWAARGWKPNHAHSWWALALVIPLWVAEQFYAVTLALLITGIIAAC CHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENLIPKATPSLNWGSLLGWSLPCVSFAALVVSPATEVPNPVFVVWICILVTAWTTDYVLK HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH STEEAHE CCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA