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The map label for this gene is ybaY [H]

Identifier: 147674297

GI number: 147674297

Start: 622291

End: 622722

Strand: Direct

Name: ybaY [H]

Synonym: VC0395_A0582

Alternate gene names: 147674297

Gene position: 622291-622722 (Clockwise)

Preceding gene: 147675157

Following gene: 147674789

Centisome position: 20.58

GC content: 45.83

Gene sequence:

>432_bases
ATGAAAAAGGTTCTACTTATTGTTATCTCTATCCTGTTTGGTTCTGTACTCGTAGGCTGCCAAATGAATGAATCCAACAA
GACACAAGATAAAATCCAATCGATTACGGGGAGTGTGGCATACCGTGAACGCATTGCGTTGCCGGATAATGCGGTGGTGA
CAGTTTACCTACAAGACGTTTCCTTGGCTGATGCGCCAGCGACGGTTATCGCAAAACAGAACTTCATCACTAATGGTATG
CAAGTACCACTTGAATTCAACCTAGCGTATGACAGCCGCAAGATCAAAGCGAGTCACCGTTACAGTGTGAGTGCGCGTAT
CGAAGTCGACGGTAAGCTACGTTTCATCACGGATACTCATTACGGTGTGATCACCGATCCTGAAGCGACTAAACACGTAC
CTATGATGCTGATTGGTGTGCATGGCGAATAA

Upstream 100 bases:

>100_bases
ATTTGTCAATAATCCTGCTGTCCAATGACACAAATACCGTGGTGGCATATAATTTGCTGGTTTTCTAATGTGATGTTTCC
CAGTTGTGTAGTGAGGCGCT

Downstream 100 bases:

>100_bases
CTCGCGATAAGGCGTTATTCCGTTAAGCTTTTCTGATTGCACAATGGCAGCCATCACGGCTGCCATTGATATTTACGTAG
CGATATTTTCCCAGTGTCAC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKKVLLIVISILFGSVLVGCQMNESNKTQDKIQSITGSVAYRERIALPDNAVVTVYLQDVSLADAPATVIAKQNFITNGM
QVPLEFNLAYDSRKIKASHRYSVSARIEVDGKLRFITDTHYGVITDPEATKHVPMMLIGVHGE

Sequences:

>Translated_143_residues
MKKVLLIVISILFGSVLVGCQMNESNKTQDKIQSITGSVAYRERIALPDNAVVTVYLQDVSLADAPATVIAKQNFITNGM
QVPLEFNLAYDSRKIKASHRYSVSARIEVDGKLRFITDTHYGVITDPEATKHVPMMLIGVHGE
>Mature_143_residues
MKKVLLIVISILFGSVLVGCQMNESNKTQDKIQSITGSVAYRERIALPDNAVVTVYLQDVSLADAPATVIAKQNFITNGM
QVPLEFNLAYDSRKIKASHRYSVSARIEVDGKLRFITDTHYGVITDPEATKHVPMMLIGVHGE

Specific function: Unknown

COG id: COG3126

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786658, Length=98, Percent_Identity=43.8775510204082, Blast_Score=80, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15777; Mature: 15777

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLLIVISILFGSVLVGCQMNESNKTQDKIQSITGSVAYRERIALPDNAVVTVYLQDV
CCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECC
SLADAPATVIAKQNFITNGMQVPLEFNLAYDSRKIKASHRYSVSARIEVDGKLRFITDTH
CCCCCCEEEEEECCCCCCCEEEEEEEEEEECCEEEECCCEEEEEEEEEECCEEEEEEECC
YGVITDPEATKHVPMMLIGVHGE
CEEEECCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MKKVLLIVISILFGSVLVGCQMNESNKTQDKIQSITGSVAYRERIALPDNAVVTVYLQDV
CCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECC
SLADAPATVIAKQNFITNGMQVPLEFNLAYDSRKIKASHRYSVSARIEVDGKLRFITDTH
CCCCCCEEEEEECCCCCCCEEEEEEEEEEECCEEEECCCEEEEEEEEEECCEEEEEEECC
YGVITDPEATKHVPMMLIGVHGE
CEEEECCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]