| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147674675
Identifier: 147674675
GI number: 147674675
Start: 2192255
End: 2193601
Strand: Reverse
Name: 147674675
Synonym: VC0395_A2034
Alternate gene names: NA
Gene position: 2193601-2192255 (Counterclockwise)
Preceding gene: 147675265
Following gene: 147673797
Centisome position: 72.54
GC content: 49.59
Gene sequence:
>1347_bases TTGGCGTGCAGGTTGGCGCCGTGGTGGAAATCGCGCTTGCTTAGGGATAACCCAATGATACGAAGCCTTTTTCAAACACG CCTGATGAGCGGTGTTGTCGGTCTATTAGCCATGACGAGCGGTGCTGCCTTAGCGGCCGACTGGAGCGTTTCTGGTTATG GTTCGATTGGTTATAGCTATGAAAATGAAGAGAATCTCGGTTTCCTGCGCAACATCGCTCAGCCAGATGATTATCAACGC AACGGATCGTTTAAGCCAGATAGCAATATTGGGGTTCAGTTTGATCTGCAGTTAGATCCGCAATGGTCGGTGACCACTCA GTGGGTAATGAAAGAGCGAGTCGAGCAGCGCTTCGATGATATTACTGAGCTGGCTTTTGTGCGTTATACGCCGGATGAAA ATTGGGATATTCGCCTAGGGCGCCTTGGGCTTAACGCCTATATCGCCGCTGACAGCCGACGGATTGACTACGCCCACCTT TGGTTACGCCCTCCCCAAGAGTTTTATGGCGGCATTTTCTATGATGCCATCGATGGGATTGATGTCACTTATCGCAGCCA ATGGGATGAGATCACTTGGTCGTTAGGCGCGCAATATGGCCGAATTAAACAGAAACTGCAAAATACCGCTTCCAGCGAAA TTTCTGCCACGCAATCCGATCAAACATTAGCTTTGGTGTTTTCACTCGAACAGGATCGTTGGTTTGGACGCCTCTCCTAT GTGCATGTCGGGCAACTGAAGGTGGATCTAGACGGTAATTCTCTACTGGGTATTCAAGTCGTCAATCAACTGGCGCAAGC CGGGCTTGGCCCGATCAGCACCGAAGCGGCGCAGTTAGCTGAGCAAATCAATCTTCAAGAAGAAACCATAGAGTATTGGC AATTGGGTTTTGGCTATCGAGGCGATCAGTGGTCACTCCAATCAGAAATTTATACCATCCTTGGTGAGAAAGCCGTGGTT CCTGAAGGGGTCGGTGGCTACGCCATTGCTGGGTATACTCTCGGCAATGTCACACCTTATGTTATCTACGGTCGGTTTAA CCCGAAAAATCCGCCCTACCAAGCGCAGTCTGATTGGGGGTTATCCCCTGTCAATGGCGCGCAATTGGCAGAGGTACAGA AATGGTTGATTGGTGGCATTAACTCCACTTACATCGATCAGCAGACGTTTTCACTCGGAGTCCGCTGGGACGTCACTGCT CAGATAGCTTTGAAAGCACAATATGATTACATCCAGATTGCCGATAATGGCTATGGATTATGGGCCATTCCTTTAGAAGC GGATTTGCAGGGTCTGCAGGGGCGGGATGTGCAGCTGTTTTCTGTCAGCGTTAACTTTGTGTTTTAG
Upstream 100 bases:
>100_bases TTGCACCCAACGGGTATTTTTGTCTCACCAATCACTAAAATGAAAGATATTGGGTGATGTCATTAATCATCAATGACGAT CGAAATGGAGAATATTTCAC
Downstream 100 bases:
>100_bases GAGGACTCAATGCGATATTGGTTACTCCTCATTCTTTTGCTGAGTCCATGGGTTTCGGCTTCCGCTGAATTGTATGTGGT TGCTAGCCCGAAGAGTCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MACRLAPWWKSRLLRDNPMIRSLFQTRLMSGVVGLLAMTSGAALAADWSVSGYGSIGYSYENEENLGFLRNIAQPDDYQR NGSFKPDSNIGVQFDLQLDPQWSVTTQWVMKERVEQRFDDITELAFVRYTPDENWDIRLGRLGLNAYIAADSRRIDYAHL WLRPPQEFYGGIFYDAIDGIDVTYRSQWDEITWSLGAQYGRIKQKLQNTASSEISATQSDQTLALVFSLEQDRWFGRLSY VHVGQLKVDLDGNSLLGIQVVNQLAQAGLGPISTEAAQLAEQINLQEETIEYWQLGFGYRGDQWSLQSEIYTILGEKAVV PEGVGGYAIAGYTLGNVTPYVIYGRFNPKNPPYQAQSDWGLSPVNGAQLAEVQKWLIGGINSTYIDQQTFSLGVRWDVTA QIALKAQYDYIQIADNGYGLWAIPLEADLQGLQGRDVQLFSVSVNFVF
Sequences:
>Translated_448_residues MACRLAPWWKSRLLRDNPMIRSLFQTRLMSGVVGLLAMTSGAALAADWSVSGYGSIGYSYENEENLGFLRNIAQPDDYQR NGSFKPDSNIGVQFDLQLDPQWSVTTQWVMKERVEQRFDDITELAFVRYTPDENWDIRLGRLGLNAYIAADSRRIDYAHL WLRPPQEFYGGIFYDAIDGIDVTYRSQWDEITWSLGAQYGRIKQKLQNTASSEISATQSDQTLALVFSLEQDRWFGRLSY VHVGQLKVDLDGNSLLGIQVVNQLAQAGLGPISTEAAQLAEQINLQEETIEYWQLGFGYRGDQWSLQSEIYTILGEKAVV PEGVGGYAIAGYTLGNVTPYVIYGRFNPKNPPYQAQSDWGLSPVNGAQLAEVQKWLIGGINSTYIDQQTFSLGVRWDVTA QIALKAQYDYIQIADNGYGLWAIPLEADLQGLQGRDVQLFSVSVNFVF >Mature_447_residues ACRLAPWWKSRLLRDNPMIRSLFQTRLMSGVVGLLAMTSGAALAADWSVSGYGSIGYSYENEENLGFLRNIAQPDDYQRN GSFKPDSNIGVQFDLQLDPQWSVTTQWVMKERVEQRFDDITELAFVRYTPDENWDIRLGRLGLNAYIAADSRRIDYAHLW LRPPQEFYGGIFYDAIDGIDVTYRSQWDEITWSLGAQYGRIKQKLQNTASSEISATQSDQTLALVFSLEQDRWFGRLSYV HVGQLKVDLDGNSLLGIQVVNQLAQAGLGPISTEAAQLAEQINLQEETIEYWQLGFGYRGDQWSLQSEIYTILGEKAVVP EGVGGYAIAGYTLGNVTPYVIYGRFNPKNPPYQAQSDWGLSPVNGAQLAEVQKWLIGGINSTYIDQQTFSLGVRWDVTAQ IALKAQYDYIQIADNGYGLWAIPLEADLQGLQGRDVQLFSVSVNFVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50439; Mature: 50308
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACRLAPWWKSRLLRDNPMIRSLFQTRLMSGVVGLLAMTSGAALAADWSVSGYGSIGYSY CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC ENEENLGFLRNIAQPDDYQRNGSFKPDSNIGVQFDLQLDPQWSVTTQWVMKERVEQRFDD CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH ITELAFVRYTPDENWDIRLGRLGLNAYIAADSRRIDYAHLWLRPPQEFYGGIFYDAIDGI HHHEEEEEECCCCCCEEEEEEECCEEEEEECCCCCEEEEEEECCCHHHHCCEEEECCCCC DVTYRSQWDEITWSLGAQYGRIKQKLQNTASSEISATQSDQTLALVFSLEQDRWFGRLSY EEEECCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCEEEEEE VHVGQLKVDLDGNSLLGIQVVNQLAQAGLGPISTEAAQLAEQINLQEETIEYWQLGFGYR EEEEEEEEEECCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCC GDQWSLQSEIYTILGEKAVVPEGVGGYAIAGYTLGNVTPYVIYGRFNPKNPPYQAQSDWG CCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCC LSPVNGAQLAEVQKWLIGGINSTYIDQQTFSLGVRWDVTAQIALKAQYDYIQIADNGYGL CCCCCCHHHHHHHHHHHCCCCCCEECCCCEEEEEEEEEEEEEEEEEECCEEEEECCCCEE WAIPLEADLQGLQGRDVQLFSVSVNFVF EEEEHHHCCCCCCCCCEEEEEEEEEEEC >Mature Secondary Structure ACRLAPWWKSRLLRDNPMIRSLFQTRLMSGVVGLLAMTSGAALAADWSVSGYGSIGYSY CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC ENEENLGFLRNIAQPDDYQRNGSFKPDSNIGVQFDLQLDPQWSVTTQWVMKERVEQRFDD CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH ITELAFVRYTPDENWDIRLGRLGLNAYIAADSRRIDYAHLWLRPPQEFYGGIFYDAIDGI HHHEEEEEECCCCCCEEEEEEECCEEEEEECCCCCEEEEEEECCCHHHHCCEEEECCCCC DVTYRSQWDEITWSLGAQYGRIKQKLQNTASSEISATQSDQTLALVFSLEQDRWFGRLSY EEEECCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCEEEEEE VHVGQLKVDLDGNSLLGIQVVNQLAQAGLGPISTEAAQLAEQINLQEETIEYWQLGFGYR EEEEEEEEEECCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCC GDQWSLQSEIYTILGEKAVVPEGVGGYAIAGYTLGNVTPYVIYGRFNPKNPPYQAQSDWG CCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCC LSPVNGAQLAEVQKWLIGGINSTYIDQQTFSLGVRWDVTAQIALKAQYDYIQIADNGYGL CCCCCCHHHHHHHHHHHCCCCCCEECCCCEEEEEEEEEEEEEEEEEECCEEEEECCCCEE WAIPLEADLQGLQGRDVQLFSVSVNFVF EEEEHHHCCCCCCCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA