| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673797
Identifier: 147673797
GI number: 147673797
Start: 2191835
End: 2192245
Strand: Reverse
Name: 147673797
Synonym: VC0395_A2033
Alternate gene names: NA
Gene position: 2192245-2191835 (Counterclockwise)
Preceding gene: 147674675
Following gene: 147674222
Centisome position: 72.49
GC content: 47.45
Gene sequence:
>411_bases ATGCGATATTGGTTACTCCTCATTCTTTTGCTGAGTCCATGGGTTTCGGCTTCCGCTGAATTGTATGTGGTTGCTAGCCC GAAGAGTCCGATTATGGAGATTAATAAGGAGCAGTTATCCGCTTTATACCTTGGACGTAATCGCGTGGTGGGCAACACTT ACATTAATCAGGTGTTAGATCGGAGTGGTACGGTGCGTCAGCGCTTCTTTTTGCAGGTGACCAATATGCAAGAGAGCCAA ATCAACGCTTATTGGGCCAAACTGAAATTCTCAGGGCGGCTGCGTGCGCCGGAATCTGTGGTGAGTGAACAAGAGCTGAT TGCCAAATTAGAAGAGAATCCGTTCTCGATTGGCTATACCGATCAAGTGCCCAATGACGCGCTGAAAGTATTACTGGTGC TCTATGACTGA
Upstream 100 bases:
>100_bases ATTATGGGCCATTCCTTTAGAAGCGGATTTGCAGGGTCTGCAGGGGCGGGATGTGCAGCTGTTTTCTGTCAGCGTTAACT TTGTGTTTTAGGAGGACTCA
Downstream 100 bases:
>100_bases TCAAACGCGCACTTCGCCACTGGTTAATCGCTTACTAAAGATGATTTCACTGTGTGCGCTTGGGTATTTGCTGATCATTT TGGCCATCATTATTCCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MRYWLLLILLLSPWVSASAELYVVASPKSPIMEINKEQLSALYLGRNRVVGNTYINQVLDRSGTVRQRFFLQVTNMQESQ INAYWAKLKFSGRLRAPESVVSEQELIAKLEENPFSIGYTDQVPNDALKVLLVLYD
Sequences:
>Translated_136_residues MRYWLLLILLLSPWVSASAELYVVASPKSPIMEINKEQLSALYLGRNRVVGNTYINQVLDRSGTVRQRFFLQVTNMQESQ INAYWAKLKFSGRLRAPESVVSEQELIAKLEENPFSIGYTDQVPNDALKVLLVLYD >Mature_136_residues MRYWLLLILLLSPWVSASAELYVVASPKSPIMEINKEQLSALYLGRNRVVGNTYINQVLDRSGTVRQRFFLQVTNMQESQ INAYWAKLKFSGRLRAPESVVSEQELIAKLEENPFSIGYTDQVPNDALKVLLVLYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15581; Mature: 15581
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYWLLLILLLSPWVSASAELYVVASPKSPIMEINKEQLSALYLGRNRVVGNTYINQVLD CHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHCCHHHHHHHHHCCCCEECHHHHHHHHC RSGTVRQRFFLQVTNMQESQINAYWAKLKFSGRLRAPESVVSEQELIAKLEENPFSIGYT CCCCHHHHHEEEECCCCCHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC DQVPNDALKVLLVLYD CCCCCHHHEEEEEEEC >Mature Secondary Structure MRYWLLLILLLSPWVSASAELYVVASPKSPIMEINKEQLSALYLGRNRVVGNTYINQVLD CHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHCCHHHHHHHHHCCCCEECHHHHHHHHC RSGTVRQRFFLQVTNMQESQINAYWAKLKFSGRLRAPESVVSEQELIAKLEENPFSIGYT CCCCHHHHHEEEECCCCCHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCC DQVPNDALKVLLVLYD CCCCCHHHEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA