| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147674640
Identifier: 147674640
GI number: 147674640
Start: 1303868
End: 1304986
Strand: Reverse
Name: 147674640
Synonym: VC0395_A1234
Alternate gene names: NA
Gene position: 1304986-1303868 (Counterclockwise)
Preceding gene: 147674224
Following gene: 147674219
Centisome position: 43.15
GC content: 49.24
Gene sequence:
>1119_bases ATGCGCCGCTTTCGTTTGCGCTTGAAACCTTGGGTATGGCTCTGCCTCGGCGCTCTGTTTTTTATGGTGGGCTTTATTGG CTATGAGCAGGAGGAGTATCACAGCATGTTACTGCACTCGGCTGATCCTGAACACTCGACGGTACAGGCAGTGTTTGAGC CCGTTTTACCCAATCATCCCGTTCGTTTACCGGCTGATTTTGCCTCTCGCCCTGAATTTGAACAAGAGTGGTGGAAGCTA TACGCGTTGCTGGAGGATGAACAAGGCAATCCGCTTAGTGTGCAATGGAACTTTTTGCGTTTGGCGCAGGATGAGCGTGA TACGTTAGGATGGCAGACGCCTCAGCTTTATTTTTCTTCTATCGTGATTAATGGCAAGAAAGTGAGCCTACGCGATCAAA AAATAGCTCGTGGCGGCATTGGTCAAGCCGGAATGGGCGATCAGCCTTTTCGGATGTGGATTGATAACTGGACTTGGCGT TCATTGGGCATGGGACCTTTACCCGGTAATTTGCACCTCAGCACCGATCACTTCGCTCTAAATATGCAACTGCGCGCTCT TGGTCCTTATGTGTTATCGGGGGATCACGGTTATCAGGTCAAACAAGAACTGCTTTCTCTTGCGAGTTACCAGTTTCAAC AGCCCTATATCGCAGTTCATGGCGATTTGGTGGTAAGTCCTGAGCTACCCGCATTGAGAGTCCGCGGACGCGCTTGGTTG AGTAAAGAGTGGGGCAGTGAGTTAGTCGCTAACGAGCTAGCGGGCACGGATAGTTTCGTCATCCCACTCAATGATAAGCA GTGGTTGACGGTGAATCGCTTTCGCCACCGTGGAGTGCCAGATTCTGTGTACGGCATGCTGCATAACCTCAACGGTAAGA GTGTCGCGTTGTTGAATCGGGATATTCAACTCGAAGCGCTTTCTTCCTCTTCATTGAGTAATGGAAAGCGAGTCCCTCTA CGTTGGCGGTTAGCGATTCCTAAGTATCAAGTGAATGTATCTATTGAGCCATTGGATCGTGACGCTTGGCAGACATTCTT AATTCCGTATTGGGAAGGGCGTATTAAAGTGCTTGGAAGCCACAATCAGACCGGTTTTATGCAGTTATCAGGCTATTAA
Upstream 100 bases:
>100_bases AGTGGTGTGGTCTATGATGGCTTTAATTTTGGCGGGCGCTTTGCCGATTATTCGCTTGGCAAGAAAATCACCGATGAAAT CACTGCGAGAGGCTTTGTAA
Downstream 100 bases:
>100_bases TTTCCTGTGATGATTATTTAGGGTTTGACAAAAAGGCGCGTTAAGCGCTTTTTTGGTTATGAGAACAAGATAAAACAATC AGTTACTATTTTTGATCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Hydrolase; Lipoprotein; ABC Transporter Type C Secreted Protein; Hydrolase; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Attachment Protein; Hydroxymethylglutaryl-Co A Reductase
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MRRFRLRLKPWVWLCLGALFFMVGFIGYEQEEYHSMLLHSADPEHSTVQAVFEPVLPNHPVRLPADFASRPEFEQEWWKL YALLEDEQGNPLSVQWNFLRLAQDERDTLGWQTPQLYFSSIVINGKKVSLRDQKIARGGIGQAGMGDQPFRMWIDNWTWR SLGMGPLPGNLHLSTDHFALNMQLRALGPYVLSGDHGYQVKQELLSLASYQFQQPYIAVHGDLVVSPELPALRVRGRAWL SKEWGSELVANELAGTDSFVIPLNDKQWLTVNRFRHRGVPDSVYGMLHNLNGKSVALLNRDIQLEALSSSSLSNGKRVPL RWRLAIPKYQVNVSIEPLDRDAWQTFLIPYWEGRIKVLGSHNQTGFMQLSGY
Sequences:
>Translated_372_residues MRRFRLRLKPWVWLCLGALFFMVGFIGYEQEEYHSMLLHSADPEHSTVQAVFEPVLPNHPVRLPADFASRPEFEQEWWKL YALLEDEQGNPLSVQWNFLRLAQDERDTLGWQTPQLYFSSIVINGKKVSLRDQKIARGGIGQAGMGDQPFRMWIDNWTWR SLGMGPLPGNLHLSTDHFALNMQLRALGPYVLSGDHGYQVKQELLSLASYQFQQPYIAVHGDLVVSPELPALRVRGRAWL SKEWGSELVANELAGTDSFVIPLNDKQWLTVNRFRHRGVPDSVYGMLHNLNGKSVALLNRDIQLEALSSSSLSNGKRVPL RWRLAIPKYQVNVSIEPLDRDAWQTFLIPYWEGRIKVLGSHNQTGFMQLSGY >Mature_372_residues MRRFRLRLKPWVWLCLGALFFMVGFIGYEQEEYHSMLLHSADPEHSTVQAVFEPVLPNHPVRLPADFASRPEFEQEWWKL YALLEDEQGNPLSVQWNFLRLAQDERDTLGWQTPQLYFSSIVINGKKVSLRDQKIARGGIGQAGMGDQPFRMWIDNWTWR SLGMGPLPGNLHLSTDHFALNMQLRALGPYVLSGDHGYQVKQELLSLASYQFQQPYIAVHGDLVVSPELPALRVRGRAWL SKEWGSELVANELAGTDSFVIPLNDKQWLTVNRFRHRGVPDSVYGMLHNLNGKSVALLNRDIQLEALSSSSLSNGKRVPL RWRLAIPKYQVNVSIEPLDRDAWQTFLIPYWEGRIKVLGSHNQTGFMQLSGY
Specific function: Unknown
COG id: COG5621
COG function: function code R; Predicted secreted hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42694; Mature: 42694
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFRLRLKPWVWLCLGALFFMVGFIGYEQEEYHSMLLHSADPEHSTVQAVFEPVLPNHP CCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC VRLPADFASRPEFEQEWWKLYALLEDEQGNPLSVQWNFLRLAQDERDTLGWQTPQLYFSS CCCCCCCCCCCCHHHHHHHEEEEEECCCCCEEEEEEEEEEECCCCHHHCCCCCHHHEEEE IVINGKKVSLRDQKIARGGIGQAGMGDQPFRMWIDNWTWRSLGMGPLPGNLHLSTDHFAL EEECCCEEEECHHHHHCCCCCCCCCCCCCCEEEECCCEEHHCCCCCCCCCEEEECCEEEE NMQLRALGPYVLSGDHGYQVKQELLSLASYQFQQPYIAVHGDLVVSPELPALRVRGRAWL EEEEEECCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCEEECCCCCCEEECCCCHH SKEWGSELVANELAGTDSFVIPLNDKQWLTVNRFRHRGVPDSVYGMLHNLNGKSVALLNR HHHHHHHHHHHHHCCCCEEEEECCCCCEEEEHHHHCCCCCHHHHHHHHCCCCCEEEEEEC DIQLEALSSSSLSNGKRVPLRWRLAIPKYQVNVSIEPLDRDAWQTFLIPYWEGRIKVLGS CEEEEEECCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCEEEEEEEECCEEEEEEC HNQTGFMQLSGY CCCCEEEEECCC >Mature Secondary Structure MRRFRLRLKPWVWLCLGALFFMVGFIGYEQEEYHSMLLHSADPEHSTVQAVFEPVLPNHP CCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC VRLPADFASRPEFEQEWWKLYALLEDEQGNPLSVQWNFLRLAQDERDTLGWQTPQLYFSS CCCCCCCCCCCCHHHHHHHEEEEEECCCCCEEEEEEEEEEECCCCHHHCCCCCHHHEEEE IVINGKKVSLRDQKIARGGIGQAGMGDQPFRMWIDNWTWRSLGMGPLPGNLHLSTDHFAL EEECCCEEEECHHHHHCCCCCCCCCCCCCCEEEECCCEEHHCCCCCCCCCEEEECCEEEE NMQLRALGPYVLSGDHGYQVKQELLSLASYQFQQPYIAVHGDLVVSPELPALRVRGRAWL EEEEEECCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCEEECCCCCCEEECCCCHH SKEWGSELVANELAGTDSFVIPLNDKQWLTVNRFRHRGVPDSVYGMLHNLNGKSVALLNR HHHHHHHHHHHHHCCCCEEEEECCCCCEEEEHHHHCCCCCHHHHHHHHCCCCCEEEEEEC DIQLEALSSSSLSNGKRVPLRWRLAIPKYQVNVSIEPLDRDAWQTFLIPYWEGRIKVLGS CEEEEEECCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCEEEEEEEECCEEEEEEC HNQTGFMQLSGY CCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA