| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is yceG [C]
Identifier: 147674599
GI number: 147674599
Start: 1723973
End: 1724989
Strand: Reverse
Name: yceG [C]
Synonym: VC0395_A1603
Alternate gene names: 147674599
Gene position: 1724989-1723973 (Counterclockwise)
Preceding gene: 147673849
Following gene: 147673617
Centisome position: 57.04
GC content: 46.41
Gene sequence:
>1017_bases GTGATTAAAAAGCGGGTATTGGTGTTGGTTGCTCTGATCGGTATTGTGGCAGGCAGCTACTTTTATGTTGTTAAGCAGAT GGATCAGTATCTGGCTCAGCCTTTGATGATCCAAGAGGCTCAGCTCGTCACGATCGCCTCAGGGACCACTCTCAGTCGAG AGCTGGCCCAGTTAACCGAACAAGCTTGGATCCAAGATAGCTTTGTTGCCGAATGGGTACGTCGTTTTCATCCTGAACTC TCCAAAATTAAGGCAGGAACTTACAAGCTACAACCTGATATGTCTTTAGAGCAGGCTTTGGCGCTATTGGTTTCTGGTAA AGAGCATCAATTTTCCATCACCTTCGTGGAGGGCAGTCGTTTTCAAGAGTGGCGGGATATCCTCGCAAGCAACGAAAACA TCACCCAGCAACTGACGGGTCTGACTGAAATCGATATTGCGAAGGCTTTAGGCATTGAGCATGAAAAGCTGGAAGGTTTG TTTCTTGCCGAAACGTATCATTTTACGAAAGGAACCAGCGATGTAGAGATCCTCAAACGAGCTAATCAGAAATTGGAAAA GTTTCTACAAGTGACTTGGGAGCATCGCCAAGAGGGACTGCCGATCCAGACGCCTTATGAGGCCTTAATCCTTGCCTCGA TCATTGAAAAAGAAACCTCAATTGCCGAGGAACGCGAACGCATTGCGGCCGTTTTCATTAATCGTTTGAATAAGCGCATG CGCTTACAAACGGATCCAACGGTGATTTACGGGATGGGAGAGACCTACGATGGCAATATCCGTAAGAAAGATTTGCGTGC CCGTACACCATATAACACTTATGTGATCAATGGGTTACCTCCAACGCCTATCGCAATGCCCGGAGAAGCGTCAATTTATG CCGCACTCAATCCTGAACAGAGTGATTATCTTTACTTTGTGGCAAGCGGTGAGGGTGGACACAATTTCTCTAAGACACTC GCAGATCATAACCGTGCTGTGCGTGCTTATCTCAAAAAACTTAGAACAAAACAATGA
Upstream 100 bases:
>100_bases TTACCAATGCCTTACTTGAGGTTGCTCCAGTCACACAAATTGGTCAACAACGATTGACGATAGGTAGCATGACGCGACGA TTTCAGGAGAGTAGTAATTC
Downstream 100 bases:
>100_bases ACGCAAAATTTATCGTAATTGAAGGTCTTGAAGGGGCGGGCAAAAGCACGGCGATTCAAGTGGTGGTAGAAACCTTACAG CAAAATGGGATTGATCACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MIKKRVLVLVALIGIVAGSYFYVVKQMDQYLAQPLMIQEAQLVTIASGTTLSRELAQLTEQAWIQDSFVAEWVRRFHPEL SKIKAGTYKLQPDMSLEQALALLVSGKEHQFSITFVEGSRFQEWRDILASNENITQQLTGLTEIDIAKALGIEHEKLEGL FLAETYHFTKGTSDVEILKRANQKLEKFLQVTWEHRQEGLPIQTPYEALILASIIEKETSIAEERERIAAVFINRLNKRM RLQTDPTVIYGMGETYDGNIRKKDLRARTPYNTYVINGLPPTPIAMPGEASIYAALNPEQSDYLYFVASGEGGHNFSKTL ADHNRAVRAYLKKLRTKQ
Sequences:
>Translated_338_residues MIKKRVLVLVALIGIVAGSYFYVVKQMDQYLAQPLMIQEAQLVTIASGTTLSRELAQLTEQAWIQDSFVAEWVRRFHPEL SKIKAGTYKLQPDMSLEQALALLVSGKEHQFSITFVEGSRFQEWRDILASNENITQQLTGLTEIDIAKALGIEHEKLEGL FLAETYHFTKGTSDVEILKRANQKLEKFLQVTWEHRQEGLPIQTPYEALILASIIEKETSIAEERERIAAVFINRLNKRM RLQTDPTVIYGMGETYDGNIRKKDLRARTPYNTYVINGLPPTPIAMPGEASIYAALNPEQSDYLYFVASGEGGHNFSKTL ADHNRAVRAYLKKLRTKQ >Mature_338_residues MIKKRVLVLVALIGIVAGSYFYVVKQMDQYLAQPLMIQEAQLVTIASGTTLSRELAQLTEQAWIQDSFVAEWVRRFHPEL SKIKAGTYKLQPDMSLEQALALLVSGKEHQFSITFVEGSRFQEWRDILASNENITQQLTGLTEIDIAKALGIEHEKLEGL FLAETYHFTKGTSDVEILKRANQKLEKFLQVTWEHRQEGLPIQTPYEALILASIIEKETSIAEERERIAAVFINRLNKRM RLQTDPTVIYGMGETYDGNIRKKDLRARTPYNTYVINGLPPTPIAMPGEASIYAALNPEQSDYLYFVASGEGGHNFSKTL ADHNRAVRAYLKKLRTKQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=326, Percent_Identity=44.1717791411043, Blast_Score=270, Evalue=1e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 38409; Mature: 38409
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKRVLVLVALIGIVAGSYFYVVKQMDQYLAQPLMIQEAQLVTIASGTTLSRELAQLTE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEECCCHHHHHHHHHHH QAWIQDSFVAEWVRRFHPELSKIKAGTYKLQPDMSLEQALALLVSGKEHQFSITFVEGSR HHHHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCH FQEWRDILASNENITQQLTGLTEIDIAKALGIEHEKLEGLFLAETYHFTKGTSDVEILKR HHHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCHHHHCCEEEEEEEECCCCCCHHHHHHH ANQKLEKFLQVTWEHRQEGLPIQTPYEALILASIIEKETSIAEERERIAAVFINRLNKRM HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE RLQTDPTVIYGMGETYDGNIRKKDLRARTPYNTYVINGLPPTPIAMPGEASIYAALNPEQ EECCCCEEEEECCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCC SDYLYFVASGEGGHNFSKTLADHNRAVRAYLKKLRTKQ CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIKKRVLVLVALIGIVAGSYFYVVKQMDQYLAQPLMIQEAQLVTIASGTTLSRELAQLTE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCEEEEEECCCHHHHHHHHHHH QAWIQDSFVAEWVRRFHPELSKIKAGTYKLQPDMSLEQALALLVSGKEHQFSITFVEGSR HHHHHHHHHHHHHHHHCCHHHHHCCCCEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCH FQEWRDILASNENITQQLTGLTEIDIAKALGIEHEKLEGLFLAETYHFTKGTSDVEILKR HHHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCHHHHCCEEEEEEEECCCCCCHHHHHHH ANQKLEKFLQVTWEHRQEGLPIQTPYEALILASIIEKETSIAEERERIAAVFINRLNKRM HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE RLQTDPTVIYGMGETYDGNIRKKDLRARTPYNTYVINGLPPTPIAMPGEASIYAALNPEQ EECCCCEEEEECCCCCCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCC SDYLYFVASGEGGHNFSKTLADHNRAVRAYLKKLRTKQ CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]