| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is qor [H]
Identifier: 147674535
GI number: 147674535
Start: 76424
End: 77437
Strand: Direct
Name: qor [H]
Synonym: VC0395_A0087
Alternate gene names: 147674535
Gene position: 76424-77437 (Clockwise)
Preceding gene: 147675475
Following gene: 147673925
Centisome position: 2.53
GC content: 51.18
Gene sequence:
>1014_bases TTGGTATATATTCAAAGGGATGCTTCGGCATCCCTTTTTATTCGCGCGATAGGGATAGTGGAAATGGAAAACAAACGAAT CGTCATTACCCAATTTGGTACACCGGATGTGTTGGCCATGCAAAGTGCGCCAATTCCTACCCCCAAAGCGGGTGAAGTAT TAGTGAAAGTTGCTTTCGCGAGTGTTAACCCTATCGATGTGAAAACCCGGGCGGGGTTAGGATGGGCGGCAGCACAAAAT AAAGACAAACTGCCGTGGACACCCGGTTACGATATCTCCGGACGAGTTGTGGCGTTAGGCGAGGGAGTTAGCCGCCTTAA AGAGCGGGATAATGTGGCGGGATTTATTGGTTTCCCATTGCGCGGTGGTGGTTACAGTCAGTATGTTTGTGTGCCTGAGC AGGAATTGAGTTTGGTTCCTGATGCAGTAACGCTCGAAGCGGCTGCCGCACTGCCCCTTGCGGGGCAAACCGCCGCGCAA GCCTTGAGCAAAGCGCAAGTCCAAGAAGGTGAACGTGTGTTAATCCTTGCAGGGGCGGGTGGCGTTGGGCATATCGCGGT GCAAATTGCACTCGCCGCTAAGACTGAAGTATTTACCACTTGCAGTGAAGCGAATTTAGACTATCTGGCCACGCTTGGCG CTCATGCGATCAATTACCAATTTGCGCCCGTCTCTCAGCGTTTAGAAGAGGTGGATGTGTTGATCGATCTGGTGGGGGGA GAGGCGGCGTTGGATGCGCTTAAATGCCTAAAAGATAACGCTCGCGTCATTACTGTACCGACGTTAACCGCCGAGCTTAT CTGCGAAAAAGCCAAGCTACTCGGTTTTGAAGCTACGGGCATGTTGGTAGATCCGAATCCAGAGCAGCTCGATACCATGC TGTATATGGTCAGTGTCGGGCTACTGAAAATCGAAATTCAGCACATCTATTCACTGTTAGACGCCGCGCAAGCCCATGAG CAGATTGAATCCGGACACACGCGAGGCAAGTTGCTTCTTGATATGAAATGCTAG
Upstream 100 bases:
>100_bases CAGCGGTAGCGGCAGGTGTGTTGCTGGCTCTAGTGGGTTAAGCATGAGTTGGTTGCACTTTGCGCAAAATGGCGATGCAA AGTTAACGACTTAAAAGAAA
Downstream 100 bases:
>100_bases ATTGGTGGAATGACTCTTCTGCGCTACTCACTTCTCTCTTTGCTGAATCGCCGCTGAGCTTACTGTTCTGGAGTGGTTTT CTCAGTGCAACATTATTACC
Product: quinone oxidoreductase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MVYIQRDASASLFIRAIGIVEMENKRIVITQFGTPDVLAMQSAPIPTPKAGEVLVKVAFASVNPIDVKTRAGLGWAAAQN KDKLPWTPGYDISGRVVALGEGVSRLKERDNVAGFIGFPLRGGGYSQYVCVPEQELSLVPDAVTLEAAAALPLAGQTAAQ ALSKAQVQEGERVLILAGAGGVGHIAVQIALAAKTEVFTTCSEANLDYLATLGAHAINYQFAPVSQRLEEVDVLIDLVGG EAALDALKCLKDNARVITVPTLTAELICEKAKLLGFEATGMLVDPNPEQLDTMLYMVSVGLLKIEIQHIYSLLDAAQAHE QIESGHTRGKLLLDMKC
Sequences:
>Translated_337_residues MVYIQRDASASLFIRAIGIVEMENKRIVITQFGTPDVLAMQSAPIPTPKAGEVLVKVAFASVNPIDVKTRAGLGWAAAQN KDKLPWTPGYDISGRVVALGEGVSRLKERDNVAGFIGFPLRGGGYSQYVCVPEQELSLVPDAVTLEAAAALPLAGQTAAQ ALSKAQVQEGERVLILAGAGGVGHIAVQIALAAKTEVFTTCSEANLDYLATLGAHAINYQFAPVSQRLEEVDVLIDLVGG EAALDALKCLKDNARVITVPTLTAELICEKAKLLGFEATGMLVDPNPEQLDTMLYMVSVGLLKIEIQHIYSLLDAAQAHE QIESGHTRGKLLLDMKC >Mature_337_residues MVYIQRDASASLFIRAIGIVEMENKRIVITQFGTPDVLAMQSAPIPTPKAGEVLVKVAFASVNPIDVKTRAGLGWAAAQN KDKLPWTPGYDISGRVVALGEGVSRLKERDNVAGFIGFPLRGGGYSQYVCVPEQELSLVPDAVTLEAAAALPLAGQTAAQ ALSKAQVQEGERVLILAGAGGVGHIAVQIALAAKTEVFTTCSEANLDYLATLGAHAINYQFAPVSQRLEEVDVLIDLVGG EAALDALKCLKDNARVITVPTLTAELICEKAKLLGFEATGMLVDPNPEQLDTMLYMVSVGLLKIEIQHIYSLLDAAQAHE QIESGHTRGKLLLDMKC
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI47519420, Length=351, Percent_Identity=29.9145299145299, Blast_Score=112, Evalue=4e-25, Organism=Homo sapiens, GI194239674, Length=326, Percent_Identity=27.9141104294479, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI13236495, Length=326, Percent_Identity=27.9141104294479, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI22538446, Length=331, Percent_Identity=29.3051359516616, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI22538444, Length=331, Percent_Identity=29.3051359516616, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI194239676, Length=314, Percent_Identity=27.7070063694268, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI24308257, Length=235, Percent_Identity=28.5106382978723, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI28557745, Length=281, Percent_Identity=30.2491103202847, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI18379349, Length=242, Percent_Identity=32.6446280991736, Blast_Score=82, Evalue=7e-16, Organism=Escherichia coli, GI1790485, Length=330, Percent_Identity=27.2727272727273, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI87082125, Length=345, Percent_Identity=24.3478260869565, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71987554, Length=203, Percent_Identity=33.9901477832512, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17507255, Length=192, Percent_Identity=31.25, Blast_Score=73, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6319520, Length=337, Percent_Identity=27.893175074184, Blast_Score=81, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 35858; Mature: 35858
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVYIQRDASASLFIRAIGIVEMENKRIVITQFGTPDVLAMQSAPIPTPKAGEVLVKVAFA CEEEEECCCCEEEEEEEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEEEC SVNPIDVKTRAGLGWAAAQNKDKLPWTPGYDISGRVVALGEGVSRLKERDNVAGFIGFPL CCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCEEEEECCC RGGGYSQYVCVPEQELSLVPDAVTLEAAAALPLAGQTAAQALSKAQVQEGERVLILAGAG CCCCCCEEEECCHHHHHCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCC GVGHIAVQIALAAKTEVFTTCSEANLDYLATLGAHAINYQFAPVSQRLEEVDVLIDLVGG CCCEEEEEEEEEECCEEEEECCCCCCHHHHHHCCHHEEEEECCHHHHHHHHHHHEEECCC EAALDALKCLKDNARVITVPTLTAELICEKAKLLGFEATGMLVDPNPEQLDTMLYMVSVG HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCEEECCEEECCCHHHHHHHHHHHHHH LLKIEIQHIYSLLDAAQAHEQIESGHTRGKLLLDMKC HHEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC >Mature Secondary Structure MVYIQRDASASLFIRAIGIVEMENKRIVITQFGTPDVLAMQSAPIPTPKAGEVLVKVAFA CEEEEECCCCEEEEEEEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCEEEEEEEC SVNPIDVKTRAGLGWAAAQNKDKLPWTPGYDISGRVVALGEGVSRLKERDNVAGFIGFPL CCCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCEEEEECCC RGGGYSQYVCVPEQELSLVPDAVTLEAAAALPLAGQTAAQALSKAQVQEGERVLILAGAG CCCCCCEEEECCHHHHHCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECCC GVGHIAVQIALAAKTEVFTTCSEANLDYLATLGAHAINYQFAPVSQRLEEVDVLIDLVGG CCCEEEEEEEEEECCEEEEECCCCCCHHHHHHCCHHEEEEECCHHHHHHHHHHHEEECCC EAALDALKCLKDNARVITVPTLTAELICEKAKLLGFEATGMLVDPNPEQLDTMLYMVSVG HHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCEEECCEEECCCHHHHHHHHHHHHHH LLKIEIQHIYSLLDAAQAHEQIESGHTRGKLLLDMKC HHEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]