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The map label for this gene is yqaA [H]

Identifier: 147673925

GI number: 147673925

Start: 77431

End: 77892

Strand: Direct

Name: yqaA [H]

Synonym: VC0395_A0088

Alternate gene names: 147673925

Gene position: 77431-77892 (Clockwise)

Preceding gene: 147674535

Following gene: 147673676

Centisome position: 2.56

GC content: 48.92

Gene sequence:

>462_bases
ATGCTAGATTGGTGGAATGACTCTTCTGCGCTACTCACTTCTCTCTTTGCTGAATCGCCGCTGAGCTTACTGTTCTGGAG
TGGTTTTCTCAGTGCAACATTATTACCGGGCGGCTCAGAAGCGGCGTTGTTGGCGAGTTTATCGCTCGCTCAACATCCGG
TTTGGCTCATCGTTGCGGTGTCAACGGCCGGGAACACTTTAGGTGGCATGACCAACTACGCGTTAGGTTTATGGCTGCCG
CATCGAACTGATTCACAAAAACAAGGTCATAAAGCCAAGCTCTGGTTGCAGCGTTACGGTTATTGGGCGTTGCTTGGGAG
TTGGTTGCCGATTATTGGTGACCCACTCTGTTTAGCGGCAGGTTGGCTGCGTTTAAACGTACTCCCTGCATTTTTGATGA
TTTTGATAGGTAAGGCGCTGCGTTATTCATTGCTTGCTGCGTTGTATTACGGTTTGTTTTAA

Upstream 100 bases:

>100_bases
AAATCGAAATTCAGCACATCTATTCACTGTTAGACGCCGCGCAAGCCCATGAGCAGATTGAATCCGGACACACGCGAGGC
AAGTTGCTTCTTGATATGAA

Downstream 100 bases:

>100_bases
GGAGATGTGATGAGAAAAGTCGCGTTGTTTGGATTTTCTCTTTTGTTATTAGCGGGATGCAGTAGTTCTGACTCATCGTT
GCCGCTGTTTTCTTCTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MLDWWNDSSALLTSLFAESPLSLLFWSGFLSATLLPGGSEAALLASLSLAQHPVWLIVAVSTAGNTLGGMTNYALGLWLP
HRTDSQKQGHKAKLWLQRYGYWALLGSWLPIIGDPLCLAAGWLRLNVLPAFLMILIGKALRYSLLAALYYGLF

Sequences:

>Translated_153_residues
MLDWWNDSSALLTSLFAESPLSLLFWSGFLSATLLPGGSEAALLASLSLAQHPVWLIVAVSTAGNTLGGMTNYALGLWLP
HRTDSQKQGHKAKLWLQRYGYWALLGSWLPIIGDPLCLAAGWLRLNVLPAFLMILIGKALRYSLLAALYYGLF
>Mature_153_residues
MLDWWNDSSALLTSLFAESPLSLLFWSGFLSATLLPGGSEAALLASLSLAQHPVWLIVAVSTAGNTLGGMTNYALGLWLP
HRTDSQKQGHKAKLWLQRYGYWALLGSWLPIIGDPLCLAAGWLRLNVLPAFLMILIGKALRYSLLAALYYGLF

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0489 [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=125, Percent_Identity=52.8, Blast_Score=112, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 16762; Mature: 16762

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDWWNDSSALLTSLFAESPLSLLFWSGFLSATLLPGGSEAALLASLSLAQHPVWLIVAV
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEE
STAGNTLGGMTNYALGLWLPHRTDSQKQGHKAKLWLQRYGYWALLGSWLPIIGDPLCLAA
ECCCCCCCCHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
GWLRLNVLPAFLMILIGKALRYSLLAALYYGLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDWWNDSSALLTSLFAESPLSLLFWSGFLSATLLPGGSEAALLASLSLAQHPVWLIVAV
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEEE
STAGNTLGGMTNYALGLWLPHRTDSQKQGHKAKLWLQRYGYWALLGSWLPIIGDPLCLAA
ECCCCCCCCHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
GWLRLNVLPAFLMILIGKALRYSLLAALYYGLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]