| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is folB [H]
Identifier: 147674486
GI number: 147674486
Start: 48761
End: 49150
Strand: Direct
Name: folB [H]
Synonym: VC0395_A0052
Alternate gene names: 147674486
Gene position: 48761-49150 (Clockwise)
Preceding gene: 147673630
Following gene: 147673898
Centisome position: 1.61
GC content: 53.33
Gene sequence:
>390_bases TTGGGTATCCGACCTGTGAACAGGAAGCGATTGAGCATGGATAAAGTGTTTATTGAACAGTTGGAAGTGATCACGACGAT TGGGGTCTACGACTGGGAACAGCAGATCAAGCAGAAATTGGTGCTCGATCTGGAAATGGCGCACGACAACCGTGCAGCGG GAAAAAGTGATGATGTAGCGGATGCTCTGGACTATGCCCAAGTCAGCCAAGCTGTGCTGGAGCATATCGAACAAGGGCGT TTTTTACTGGTAGAGCGTGTGGCTGAAGAAGTGGCTGAACTGATCATGACTCGCTTTGCTGTGCCTTGGCTCCGCATCCG CTTGACCAAGCCGGGCGCAGTGCCGCAAGCCAAAGGAGTCGGCGTGATCATCGAGCGAGCGCGTGGATGA
Upstream 100 bases:
>100_bases TCCCTGTTGAATAAGAAAAAATCTTTTAGGATTTAGCATCTTGAACAGGTTTGGGTATATCATATCGCGATTGAGCGGAT AGTACGATTTTTTCATCGGT
Downstream 100 bases:
>100_bases TCACCGCTTATATTGGTGTGGGCTCAAATCAGGATCGCCATCAGTCGATTGAAGCTGGCCTTCGTGCATTAGCCGAGCTG GCGAGCCAGTGGCGTCTGTC
Product: putative dihydroneopterin aldolase FolB
Products: NA
Alternate protein names: DHNA [H]
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MGIRPVNRKRLSMDKVFIEQLEVITTIGVYDWEQQIKQKLVLDLEMAHDNRAAGKSDDVADALDYAQVSQAVLEHIEQGR FLLVERVAEEVAELIMTRFAVPWLRIRLTKPGAVPQAKGVGVIIERARG
Sequences:
>Translated_129_residues MGIRPVNRKRLSMDKVFIEQLEVITTIGVYDWEQQIKQKLVLDLEMAHDNRAAGKSDDVADALDYAQVSQAVLEHIEQGR FLLVERVAEEVAELIMTRFAVPWLRIRLTKPGAVPQAKGVGVIIERARG >Mature_128_residues GIRPVNRKRLSMDKVFIEQLEVITTIGVYDWEQQIKQKLVLDLEMAHDNRAAGKSDDVADALDYAQVSQAVLEHIEQGRF LLVERVAEEVAELIMTRFAVPWLRIRLTKPGAVPQAKGVGVIIERARG
Specific function: Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. Can use L-threo-dihydroneopterin and D-erythro-dihydroneopterin as substrates for the formation of 6-hydroxymethyldihydropterin, but it can also catalyze the epimeriza
COG id: COG1539
COG function: function code H; Dihydroneopterin aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHNA family [H]
Homologues:
Organism=Escherichia coli, GI87082204, Length=117, Percent_Identity=68.3760683760684, Blast_Score=169, Evalue=7e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006156 - InterPro: IPR006157 [H]
Pfam domain/function: PF02152 FolB [H]
EC number: =4.1.2.25 [H]
Molecular weight: Translated: 14578; Mature: 14447
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIRPVNRKRLSMDKVFIEQLEVITTIGVYDWEQQIKQKLVLDLEMAHDNRAAGKSDDVA CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHH DALDYAQVSQAVLEHIEQGRFLLVERVAEEVAELIMTRFAVPWLRIRLTKPGAVPQAKGV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCC GVIIERARG EEEEECCCC >Mature Secondary Structure GIRPVNRKRLSMDKVFIEQLEVITTIGVYDWEQQIKQKLVLDLEMAHDNRAAGKSDDVA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHH DALDYAQVSQAVLEHIEQGRFLLVERVAEEVAELIMTRFAVPWLRIRLTKPGAVPQAKGV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCCCCC GVIIERARG EEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]