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The map label for this gene is ychA [C]

Identifier: 147674484

GI number: 147674484

Start: 1874655

End: 1875467

Strand: Reverse

Name: ychA [C]

Synonym: VC0395_A1753

Alternate gene names: 147674484

Gene position: 1875467-1874655 (Counterclockwise)

Preceding gene: 147675215

Following gene: 147674359

Centisome position: 62.02

GC content: 47.6

Gene sequence:

>813_bases
ATGCTGAATTTATGTGATGAAGATTTTGATGCGATGGAGTTGGTGGAAGGGGCGCTTGCGCTCAACAAAGCCATTAATCC
CGAAACGCAGCTAGAATGGGCTCACATCGAGTTAGCACGTCTGCTAAAAGAAGCCGAACTGGCACTGGTACATGAGCGTG
ATGAGAAAGCGCGTTTCGAGGCTTTTTTGCGCCTGTTTTATCAAGAGTGGGGCTTTAGCGGCGATCGCGAAGCCTACTTT
GATTCTCGCAATGCCTTTATTGATCAAGTATTGCAGCGGCGCAAAGGCATTCCCGTCAGTTTAGGCTCATTACTGCTCTA
CCTAGGACACAAACTTGGCTTTCCACTCAATGGGATAAGTTTCCCGACTCAGTTTCTGCTGTCGCTCAATTGGCCGGGAG
AGCGGCCGATTTATCTCAATCCATTTAATGGCGAGATAGTGTCACAACATACACTGCAAGCTTGGTTAGTTGGGCACAAA
GGCCCACTGGCCAAGCTTAAGCCACAGCATTTACAAAGTGTCGATAATCCGACCATTATTGGGCGTTGGTTGGCGCTACT
CAAAAGTGCCTTACTGCGTGAAGAGCGCTATACTCTGGCGCTAAGATGTACCGATTTGGCACTCACTTTTGTGCCCGATG
ACCCATACGAAATCCGTGATCGTGGCTTTATTTACCAACAGCTACAGTGCCATCAAATTGCTATTTCGGACTATCAATAT
TTTATTGAGCACTGTCCGAACGATCCGGCGGCTGAATTGTTAAAAACGCAAGTCAATGCACTCAGTCACGACAGTCAAGT
GACGCTGCATTAA

Upstream 100 bases:

>100_bases
TAGCTTTGCGTTTTTTGGCGCGTTGGGCTGGTTGGCGATGGCTGGAAAAATCGCGGTCGCCAAAGCGCCGATTCTGTTTG
GTTAAGCTTAAGGTGCGACC

Downstream 100 bases:

>100_bases
CCCAACAAGAGAGATTAAGATGGAACACAAAATTGTCCATGTCGGTGATATTCCGGTTGCCAACGATAAGCCGTTTACCC
TATTTGCAGGGATGAACGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MLNLCDEDFDAMELVEGALALNKAINPETQLEWAHIELARLLKEAELALVHERDEKARFEAFLRLFYQEWGFSGDREAYF
DSRNAFIDQVLQRRKGIPVSLGSLLLYLGHKLGFPLNGISFPTQFLLSLNWPGERPIYLNPFNGEIVSQHTLQAWLVGHK
GPLAKLKPQHLQSVDNPTIIGRWLALLKSALLREERYTLALRCTDLALTFVPDDPYEIRDRGFIYQQLQCHQIAISDYQY
FIEHCPNDPAAELLKTQVNALSHDSQVTLH

Sequences:

>Translated_270_residues
MLNLCDEDFDAMELVEGALALNKAINPETQLEWAHIELARLLKEAELALVHERDEKARFEAFLRLFYQEWGFSGDREAYF
DSRNAFIDQVLQRRKGIPVSLGSLLLYLGHKLGFPLNGISFPTQFLLSLNWPGERPIYLNPFNGEIVSQHTLQAWLVGHK
GPLAKLKPQHLQSVDNPTIIGRWLALLKSALLREERYTLALRCTDLALTFVPDDPYEIRDRGFIYQQLQCHQIAISDYQY
FIEHCPNDPAAELLKTQVNALSHDSQVTLH
>Mature_270_residues
MLNLCDEDFDAMELVEGALALNKAINPETQLEWAHIELARLLKEAELALVHERDEKARFEAFLRLFYQEWGFSGDREAYF
DSRNAFIDQVLQRRKGIPVSLGSLLLYLGHKLGFPLNGISFPTQFLLSLNWPGERPIYLNPFNGEIVSQHTLQAWLVGHK
GPLAKLKPQHLQSVDNPTIIGRWLALLKSALLREERYTLALRCTDLALTFVPDDPYEIRDRGFIYQQLQCHQIAISDYQY
FIEHCPNDPAAELLKTQVNALSHDSQVTLH

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0162 family [H]

Homologues:

Organism=Escherichia coli, GI1787465, Length=270, Percent_Identity=38.8888888888889, Blast_Score=202, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30995; Mature: 30995

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLCDEDFDAMELVEGALALNKAINPETQLEWAHIELARLLKEAELALVHERDEKARFE
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AFLRLFYQEWGFSGDREAYFDSRNAFIDQVLQRRKGIPVSLGSLLLYLGHKLGFPLNGIS
HHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
FPTQFLLSLNWPGERPIYLNPFNGEIVSQHTLQAWLVGHKGPLAKLKPQHLQSVDNPTII
CCCCEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHH
GRWLALLKSALLREERYTLALRCTDLALTFVPDDPYEIRDRGFIYQQLQCHQIAISDYQY
HHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHH
FIEHCPNDPAAELLKTQVNALSHDSQVTLH
HHHHCCCCHHHHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure
MLNLCDEDFDAMELVEGALALNKAINPETQLEWAHIELARLLKEAELALVHERDEKARFE
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AFLRLFYQEWGFSGDREAYFDSRNAFIDQVLQRRKGIPVSLGSLLLYLGHKLGFPLNGIS
HHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
FPTQFLLSLNWPGERPIYLNPFNGEIVSQHTLQAWLVGHKGPLAKLKPQHLQSVDNPTII
CCCCEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHH
GRWLALLKSALLREERYTLALRCTDLALTFVPDDPYEIRDRGFIYQQLQCHQIAISDYQY
HHHHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHHHH
FIEHCPNDPAAELLKTQVNALSHDSQVTLH
HHHHCCCCHHHHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]