| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is queF [H]
Identifier: 147674480
GI number: 147674480
Start: 453534
End: 454397
Strand: Reverse
Name: queF [H]
Synonym: VC0395_A0424
Alternate gene names: 147674480
Gene position: 454397-453534 (Counterclockwise)
Preceding gene: 147673293
Following gene: 147675739
Centisome position: 15.03
GC content: 48.96
Gene sequence:
>864_bases TTGAATCGACTGAAAAACATGAGCAAATATTCCGATGCCAAAGAGCTGGCAAGCTTAACTCTGGGTAAAAAAACCGAGTA CGCCAACCAGTATGACCCAAGCTTACTGCAACCTGTGCCACGCAGCTTGAACCGCAATGATCTGCATCTTAGCGCGACTC TGCCTTTTCAAGGCTGCGATATTTGGACGCTGTATGAGCTCTCTTGGCTCAATCAGAAAGGCCTGCCCCAAGTGGCGATC GGAGAAGTGTCGATTCCAGCGACCAGTGCCAATTTGATCGAATCCAAATCGTTCAAGCTCTATCTCAACAGCTATAATCA GACTCGTTTTGCATCTTGGGATGAAGTGCAAACGCGCTTAGTGCACGATCTTTCGGCCTGCGCGGGTGAAACCGTGACCG TAAAAGTCAAACCACTGAGTGATTACACCGCAGAGCCGATAGTGACCATGCAAGGCGAGTGCATTGATGATCAAGATATT GAAATCGCTAACTACGAGTTTGATGATGCCTTGCTGCAAGGTGCAGCACAGGGTGAAGAAGTCAGCGAAGTACTGCACAG CCATTTGCTTAAATCGAACTGCCTAATCACCAATCAACCCGACTGGGGGAGCGTCGAAATTGCGTATCACGGCGCTAAGA TGAATCGTGAAGCCTTACTGCGTTATCTTGTCTCTTTCCGTGAGCATAATGAGTTTCATGAGCAGTGTGTTGAGCGTATT TTCACCGACATTATGCGCTACTGCCAGCCACAGAGTTTGACCGTGTATGCGCGTTATACTCGACGCGGTGGCTTAGACAT TAACCCATTCCGCTCCAGCCACCAGTCAGCACCGAACCATAATCAACGCATGGCGCGACAATAA
Upstream 100 bases:
>100_bases CTTGCACTACGCTTTGCGTCATAATCATCTCCATGTTGAGTTTGCGCCGCCTCGTTAATGACACTGGCACTGGGATTGCG TAAAATTCTGCACATTCTAA
Downstream 100 bases:
>100_bases GGATAAGACTTAGGATGAGATTTCTGCGCTGGATAACCATAGCGACTTTACTACTGACTTCAAGTTGGGCTCAGGCCACG ATTTACTCTTCACCTATGCT
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase [H]
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MNRLKNMSKYSDAKELASLTLGKKTEYANQYDPSLLQPVPRSLNRNDLHLSATLPFQGCDIWTLYELSWLNQKGLPQVAI GEVSIPATSANLIESKSFKLYLNSYNQTRFASWDEVQTRLVHDLSACAGETVTVKVKPLSDYTAEPIVTMQGECIDDQDI EIANYEFDDALLQGAAQGEEVSEVLHSHLLKSNCLITNQPDWGSVEIAYHGAKMNREALLRYLVSFREHNEFHEQCVERI FTDIMRYCQPQSLTVYARYTRRGGLDINPFRSSHQSAPNHNQRMARQ
Sequences:
>Translated_287_residues MNRLKNMSKYSDAKELASLTLGKKTEYANQYDPSLLQPVPRSLNRNDLHLSATLPFQGCDIWTLYELSWLNQKGLPQVAI GEVSIPATSANLIESKSFKLYLNSYNQTRFASWDEVQTRLVHDLSACAGETVTVKVKPLSDYTAEPIVTMQGECIDDQDI EIANYEFDDALLQGAAQGEEVSEVLHSHLLKSNCLITNQPDWGSVEIAYHGAKMNREALLRYLVSFREHNEFHEQCVERI FTDIMRYCQPQSLTVYARYTRRGGLDINPFRSSHQSAPNHNQRMARQ >Mature_287_residues MNRLKNMSKYSDAKELASLTLGKKTEYANQYDPSLLQPVPRSLNRNDLHLSATLPFQGCDIWTLYELSWLNQKGLPQVAI GEVSIPATSANLIESKSFKLYLNSYNQTRFASWDEVQTRLVHDLSACAGETVTVKVKPLSDYTAEPIVTMQGECIDDQDI EIANYEFDDALLQGAAQGEEVSEVLHSHLLKSNCLITNQPDWGSVEIAYHGAKMNREALLRYLVSFREHNEFHEQCVERI FTDIMRYCQPQSLTVYARYTRRGGLDINPFRSSHQSAPNHNQRMARQ
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) [H]
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 2 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789158, Length=283, Percent_Identity=63.2508833922262, Blast_Score=363, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016428 - InterPro: IPR020602 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =1.7.1.13 [H]
Molecular weight: Translated: 32709; Mature: 32709
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLKNMSKYSDAKELASLTLGKKTEYANQYDPSLLQPVPRSLNRNDLHLSATLPFQGCD CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCC IWTLYELSWLNQKGLPQVAIGEVSIPATSANLIESKSFKLYLNSYNQTRFASWDEVQTRL EEEEEEEHHCCCCCCCCEEECCEECCCCCHHHHCCCCEEEEEECCCCCCCCCHHHHHHHH VHDLSACAGETVTVKVKPLSDYTAEPIVTMQGECIDDQDIEIANYEFDDALLQGAAQGEE HHHHHHHCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCEEECCCHHHHHHHCCCCCHH VSEVLHSHLLKSNCLITNQPDWGSVEIAYHGAKMNREALLRYLVSFREHNEFHEQCVERI HHHHHHHHHHHCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHH FTDIMRYCQPQSLTVYARYTRRGGLDINPFRSSHQSAPNHNQRMARQ HHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCC >Mature Secondary Structure MNRLKNMSKYSDAKELASLTLGKKTEYANQYDPSLLQPVPRSLNRNDLHLSATLPFQGCD CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCC IWTLYELSWLNQKGLPQVAIGEVSIPATSANLIESKSFKLYLNSYNQTRFASWDEVQTRL EEEEEEEHHCCCCCCCCEEECCEECCCCCHHHHCCCCEEEEEECCCCCCCCCHHHHHHHH VHDLSACAGETVTVKVKPLSDYTAEPIVTMQGECIDDQDIEIANYEFDDALLQGAAQGEE HHHHHHHCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCEEECCCHHHHHHHCCCCCHH VSEVLHSHLLKSNCLITNQPDWGSVEIAYHGAKMNREALLRYLVSFREHNEFHEQCVERI HHHHHHHHHHHCCCEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHHHH FTDIMRYCQPQSLTVYARYTRRGGLDINPFRSSHQSAPNHNQRMARQ HHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]