Click here to switch to the map view.

The map label for this gene is 147675739

Identifier: 147675739

GI number: 147675739

Start: 451258

End: 453519

Strand: Reverse

Name: 147675739

Synonym: VC0395_A0423

Alternate gene names: NA

Gene position: 453519-451258 (Counterclockwise)

Preceding gene: 147674480

Following gene: 147675023

Centisome position: 15.0

GC content: 42.75

Gene sequence:

>2262_bases
ATGAGATTTCTGCGCTGGATAACCATAGCGACTTTACTACTGACTTCAAGTTGGGCTCAGGCCACGATTTACTCTTCACC
TATGCTCAATGAAGCTAGCGGCTTGGTCGAGGTCTCACCCTTACAAGCAAAAAAAATGGCGCAGCAGTACCTTAATGAGC
GCCATTTAGCCGAGAAACAGGAAAAACACCCCGCCACAATTGCTCGAGATGAAGCCGACAGCCGGACACGCACACCCGGC
AGTACGGTCGATGCCTTGATGATTTTGGCGCTCGCCTTGGATAATCTTGGTGAACATGAACAAGCGCAACAGATTTTGCG
CGATGCCAATGCACTGACTGAACAATACCAACTCCCCTATCTACACCTCGATGTGCAAATCCTTAGCACTCGTCTTATTT
GGCAAAAAGAGGGTGATGCACAGGCCGCGCGCGAAAGAATACAGAAGATCAATGAGCAGTATCAGGTGATCGAAAATGCC
GATCAAATCGCCAAAGGCATTGATTACAAACTTACGTTACTCAGTGCCGAAATCGCCTCAAAAGCCAATGAGCTTGAATT
GGCCGATAAGCTGTTTGCCAAGGCCAAACCCTATCTTGACACCTTACAAAACGAAAAACCGGCCATTGAGTATCACCTAA
CCTTAGGTGAGCACAATCTTAGCCATGGACGTTATAACCTGGCGCTTTCCGAATTGCTGATCGCCTACTGGAGTGCTATT
GAGAACAACGCCGGCGTACTGTTAGCGCAAGCAAACACACTGCTAGGCAAACTGTTTTTCAATCGCCAAGTGTTAGATAA
AGCACTCGATCACTTCTCACAAGCGGCAGACTTTTATGGCCGCTACGAACAATCGCCATTTTTATCTGCTGTTCTCAAAC
AAATGGGTGATGTCTACTACCAGCAAGGCAAATATAACTTAGCTTTGGTGCATTATTTCAATGTGATTGACCATCAAAAT
AATCAATCGTCACTCAGTGATGAAATTGAAATTCGCATCAATCTCTCCGCTACCTATTTACAACTCTACAACTACCCCGT
TGCTGAGCAGTATTTAACCAGCGCTGAAGAGCTATTAGGAATGGCTGATATTCCTCGTTTAAATGGGCACGCCGCCTTAC
TGCATTCAGGGTTGGCTTATTATCAAGAAATAAATCAGGATATCGTTCGTTATGCAGAAATGGCACTGCATATTGGTCAA
TCGATTCAAGATGACGAACTTCAAGAGCAAGCTTACCGTTTACTTTCTCTCGGTTATGAAAGAACCGGCTCAGCCGCCAA
AGCGCTAGACAATTTTAAAAAGAGTCAGGTTCTCGCCCAAAAACGACAAAATAAGCTTAACCAAATCAGTGAAGATGCAT
TTCGTCAGCAACGGGAGTTTATTGAACAGACCTTGCATTTAGTTGGACAAGAAAAACAGCTGCAAGAGACCAACAATCAA
TTCAGCCAATTACGTAAAGTGGCTTTGTTTTTACTGAGCATTAGCTTAGTACTTTTTCTGATTACTTTGCGACGCGGTTA
TCTTATTCAAGGCTTTCAAGATCAAATCTCTGAGTTGCATGACACTTTATTTACTCATTCGAGATCGCGCCTAAGCAATC
TACGCATGCTGAATGCGAAGTTACCCAGTTCATTAGAAAACAGTAACCGTAACTATGAACAGTGGCAGCTAGGGGAGCTC
ATTCGTCAACCGCTCAACGATAGACTGCGTTTTGTGCTGATCGATATTCCTTTCATGCGCAACATGTATCTACAAAATGG
TTATACCGCCGGTTTAGAATTAGAGCGCGCTTTTGGTAAATTTCTTAAAACTAAAATAAAAGAACCCGATCGGTTGTACC
ATTTTTCAGATGCAAGCTTGTTGTATATCGAAAAAAATGGCAGCGAGCGAAGTGAACCAGAAATATTATTCAACCAGATT
CAATCTTGGCTGAATGATTTTGCACCAGAAAGAAAAATAAACCGAATAGTTCGAATTGGTATTGCCGATTACCCATTTTT
ACCGCGGGCTTATACCGCCATCAATGATAAAGAATTGTTGGATATTTTGTTGATGGCAACCAATATCGCCAGAGAGTTAA
GCTTGAGTGAAGGCCAAAGTCATTGGGTCTATTTTAAAGCGATTGATAATGCCCCAGCCGCCAGCTTTGCTTCGGAAAAT
ATTCGACTTTCTTGTAAACAAGCAATAAATCAAGGGCTGATCAAAGTTCACTCTTCTTATAAGAATGAGGACAACATCAA
AAAACTCTTAAAAGATGGATAA

Upstream 100 bases:

>100_bases
CTCGACGCGGTGGCTTAGACATTAACCCATTCCGCTCCAGCCACCAGTCAGCACCGAACCATAATCAACGCATGGCGCGA
CAATAAGGATAAGACTTAGG

Downstream 100 bases:

>100_bases
ATGCTGCCCAGTCGGCATAAACACTGGGTGACGCCAGCAAAATATTTGTTATTATCGACAAATCAATAAATAGGATCAGG
ATTGATCCTCAACTATCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein

Number of amino acids: Translated: 753; Mature: 753

Protein sequence:

>753_residues
MRFLRWITIATLLLTSSWAQATIYSSPMLNEASGLVEVSPLQAKKMAQQYLNERHLAEKQEKHPATIARDEADSRTRTPG
STVDALMILALALDNLGEHEQAQQILRDANALTEQYQLPYLHLDVQILSTRLIWQKEGDAQAARERIQKINEQYQVIENA
DQIAKGIDYKLTLLSAEIASKANELELADKLFAKAKPYLDTLQNEKPAIEYHLTLGEHNLSHGRYNLALSELLIAYWSAI
ENNAGVLLAQANTLLGKLFFNRQVLDKALDHFSQAADFYGRYEQSPFLSAVLKQMGDVYYQQGKYNLALVHYFNVIDHQN
NQSSLSDEIEIRINLSATYLQLYNYPVAEQYLTSAEELLGMADIPRLNGHAALLHSGLAYYQEINQDIVRYAEMALHIGQ
SIQDDELQEQAYRLLSLGYERTGSAAKALDNFKKSQVLAQKRQNKLNQISEDAFRQQREFIEQTLHLVGQEKQLQETNNQ
FSQLRKVALFLLSISLVLFLITLRRGYLIQGFQDQISELHDTLFTHSRSRLSNLRMLNAKLPSSLENSNRNYEQWQLGEL
IRQPLNDRLRFVLIDIPFMRNMYLQNGYTAGLELERAFGKFLKTKIKEPDRLYHFSDASLLYIEKNGSERSEPEILFNQI
QSWLNDFAPERKINRIVRIGIADYPFLPRAYTAINDKELLDILLMATNIARELSLSEGQSHWVYFKAIDNAPAASFASEN
IRLSCKQAINQGLIKVHSSYKNEDNIKKLLKDG

Sequences:

>Translated_753_residues
MRFLRWITIATLLLTSSWAQATIYSSPMLNEASGLVEVSPLQAKKMAQQYLNERHLAEKQEKHPATIARDEADSRTRTPG
STVDALMILALALDNLGEHEQAQQILRDANALTEQYQLPYLHLDVQILSTRLIWQKEGDAQAARERIQKINEQYQVIENA
DQIAKGIDYKLTLLSAEIASKANELELADKLFAKAKPYLDTLQNEKPAIEYHLTLGEHNLSHGRYNLALSELLIAYWSAI
ENNAGVLLAQANTLLGKLFFNRQVLDKALDHFSQAADFYGRYEQSPFLSAVLKQMGDVYYQQGKYNLALVHYFNVIDHQN
NQSSLSDEIEIRINLSATYLQLYNYPVAEQYLTSAEELLGMADIPRLNGHAALLHSGLAYYQEINQDIVRYAEMALHIGQ
SIQDDELQEQAYRLLSLGYERTGSAAKALDNFKKSQVLAQKRQNKLNQISEDAFRQQREFIEQTLHLVGQEKQLQETNNQ
FSQLRKVALFLLSISLVLFLITLRRGYLIQGFQDQISELHDTLFTHSRSRLSNLRMLNAKLPSSLENSNRNYEQWQLGEL
IRQPLNDRLRFVLIDIPFMRNMYLQNGYTAGLELERAFGKFLKTKIKEPDRLYHFSDASLLYIEKNGSERSEPEILFNQI
QSWLNDFAPERKINRIVRIGIADYPFLPRAYTAINDKELLDILLMATNIARELSLSEGQSHWVYFKAIDNAPAASFASEN
IRLSCKQAINQGLIKVHSSYKNEDNIKKLLKDG
>Mature_753_residues
MRFLRWITIATLLLTSSWAQATIYSSPMLNEASGLVEVSPLQAKKMAQQYLNERHLAEKQEKHPATIARDEADSRTRTPG
STVDALMILALALDNLGEHEQAQQILRDANALTEQYQLPYLHLDVQILSTRLIWQKEGDAQAARERIQKINEQYQVIENA
DQIAKGIDYKLTLLSAEIASKANELELADKLFAKAKPYLDTLQNEKPAIEYHLTLGEHNLSHGRYNLALSELLIAYWSAI
ENNAGVLLAQANTLLGKLFFNRQVLDKALDHFSQAADFYGRYEQSPFLSAVLKQMGDVYYQQGKYNLALVHYFNVIDHQN
NQSSLSDEIEIRINLSATYLQLYNYPVAEQYLTSAEELLGMADIPRLNGHAALLHSGLAYYQEINQDIVRYAEMALHIGQ
SIQDDELQEQAYRLLSLGYERTGSAAKALDNFKKSQVLAQKRQNKLNQISEDAFRQQREFIEQTLHLVGQEKQLQETNNQ
FSQLRKVALFLLSISLVLFLITLRRGYLIQGFQDQISELHDTLFTHSRSRLSNLRMLNAKLPSSLENSNRNYEQWQLGEL
IRQPLNDRLRFVLIDIPFMRNMYLQNGYTAGLELERAFGKFLKTKIKEPDRLYHFSDASLLYIEKNGSERSEPEILFNQI
QSWLNDFAPERKINRIVRIGIADYPFLPRAYTAINDKELLDILLMATNIARELSLSEGQSHWVYFKAIDNAPAASFASEN
IRLSCKQAINQGLIKVHSSYKNEDNIKKLLKDG

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86312; Mature: 86312

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: PS50293 TPR_REGION L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLRWITIATLLLTSSWAQATIYSSPMLNEASGLVEVSPLQAKKMAQQYLNERHLAEKQ
CCHHHHHHHHHHHHHCCHHHHHEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHH
EKHPATIARDEADSRTRTPGSTVDALMILALALDNLGEHEQAQQILRDANALTEQYQLPY
HCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCE
LHLDVQILSTRLIWQKEGDAQAARERIQKINEQYQVIENADQIAKGIDYKLTLLSAEIAS
EEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHH
KANELELADKLFAKAKPYLDTLQNEKPAIEYHLTLGEHNLSHGRYNLALSELLIAYWSAI
CCHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
ENNAGVLLAQANTLLGKLFFNRQVLDKALDHFSQAADFYGRYEQSPFLSAVLKQMGDVYY
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QQGKYNLALVHYFNVIDHQNNQSSLSDEIEIRINLSATYLQLYNYPVAEQYLTSAEELLG
HCCCCCEEHEEHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHC
MADIPRLNGHAALLHSGLAYYQEINQDIVRYAEMALHIGQSIQDDELQEQAYRLLSLGYE
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
RTGSAAKALDNFKKSQVLAQKRQNKLNQISEDAFRQQREFIEQTLHLVGQEKQLQETNNQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
FSQLRKVALFLLSISLVLFLITLRRGYLIQGFQDQISELHDTLFTHSRSRLSNLRMLNAK
HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPSSLENSNRNYEQWQLGELIRQPLNDRLRFVLIDIPFMRNMYLQNGYTAGLELERAFGK
CCCHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCCCCCCCCHHHHHHHH
FLKTKIKEPDRLYHFSDASLLYIEKNGSERSEPEILFNQIQSWLNDFAPERKINRIVRIG
HHHHHCCCCHHEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCC
IADYPFLPRAYTAINDKELLDILLMATNIARELSLSEGQSHWVYFKAIDNAPAASFASEN
CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHCCCC
IRLSCKQAINQGLIKVHSSYKNEDNIKKLLKDG
CEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MRFLRWITIATLLLTSSWAQATIYSSPMLNEASGLVEVSPLQAKKMAQQYLNERHLAEKQ
CCHHHHHHHHHHHHHCCHHHHHEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHH
EKHPATIARDEADSRTRTPGSTVDALMILALALDNLGEHEQAQQILRDANALTEQYQLPY
HCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCE
LHLDVQILSTRLIWQKEGDAQAARERIQKINEQYQVIENADQIAKGIDYKLTLLSAEIAS
EEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHH
KANELELADKLFAKAKPYLDTLQNEKPAIEYHLTLGEHNLSHGRYNLALSELLIAYWSAI
CCHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
ENNAGVLLAQANTLLGKLFFNRQVLDKALDHFSQAADFYGRYEQSPFLSAVLKQMGDVYY
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QQGKYNLALVHYFNVIDHQNNQSSLSDEIEIRINLSATYLQLYNYPVAEQYLTSAEELLG
HCCCCCEEHEEHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHCCCHHHHHHHHHHHHHC
MADIPRLNGHAALLHSGLAYYQEINQDIVRYAEMALHIGQSIQDDELQEQAYRLLSLGYE
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
RTGSAAKALDNFKKSQVLAQKRQNKLNQISEDAFRQQREFIEQTLHLVGQEKQLQETNNQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
FSQLRKVALFLLSISLVLFLITLRRGYLIQGFQDQISELHDTLFTHSRSRLSNLRMLNAK
HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPSSLENSNRNYEQWQLGELIRQPLNDRLRFVLIDIPFMRNMYLQNGYTAGLELERAFGK
CCCHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCCCCCCCCHHHHHHHH
FLKTKIKEPDRLYHFSDASLLYIEKNGSERSEPEILFNQIQSWLNDFAPERKINRIVRIG
HHHHHCCCCHHEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCC
IADYPFLPRAYTAINDKELLDILLMATNIARELSLSEGQSHWVYFKAIDNAPAASFASEN
CCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHCCCC
IRLSCKQAINQGLIKVHSSYKNEDNIKKLLKDG
CEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA