| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is cheW [H]
Identifier: 147674323
GI number: 147674323
Start: 1050775
End: 1052337
Strand: Reverse
Name: cheW [H]
Synonym: VC0395_A1014
Alternate gene names: 147674323
Gene position: 1052337-1050775 (Counterclockwise)
Preceding gene: 147673937
Following gene: 147675091
Centisome position: 34.8
GC content: 45.04
Gene sequence:
>1563_bases ATGACCAGTGAAGCCCTTGTAGACAACGAACTTGAGCATGAAGAGAACCTCACACAGTATGTCAATTTCATGCTGGGTGA TGAGCTTTTTGCTTTACACATGCAAGAAGTGGAAGAAATTATCCGTCTCCCAACTACGTTTTCAGCACCACTCACTCCCA GTTATTTGATTGGATTATCCAACTTAAGAGGACAAATTCTTCCCGTTCTGTGTCTACGGACTTTACTGTGCATGGACAGA ACCTCTGCGACGGAAGCCACGCGAGTGATTGTCATTACAATTGGCAAGACCAAGATTGGATTCACCGTCGATCGTGTTGT GAATGTCGCAACCCCTGACCCTGAGATGATAAAGCCGACCAATACCGCGGGCGGCAAAATTGACCCAACCTTAATTACCA ACACCATTCACTCGGATAATCAGATTATCCAAGTACTGAATTGTCATCGTTTGTTAGACAACTCTGTCGAAGAAGAATTG GAATTAAGCACGCAGCGTTTTAACCACCTCTCTTCTCAGTCTCATTTTGGGGATGTGACCGATGAAGAACGAGATGATGA TGAAGACATGCGACAGCTCGTGTGCTGCATGGTAGATGGGCAAGAATACGCCTTTCCACTAGAGGACACTCAAGAAATTG TGCGTATACCCGAGATTATCACCAAGGTCCCTCTTACTGAATCCGCCATTCTTGGAGTGATCAATTTACGTGGCAAAACG CTCCCATTGGTCAGTCTGAGAACGCTGTTTGGATTACCCAGCATTAGCTTTAGTGATAGTCACCGTGTCTTGGTGGTGAA TATATCCCTCTCAGAGAAAGAGCGGCTTCCCGTGGGGGTTGTGGTGGATGCCGTACGCGAAGTCATACGCCTGCATGTGG ACGTGATGGATAGCGTTCCAGAAATCATGAGCAAGATGGGACAAGCCAATGACATTTCGGCCATTTGTAATCTTGATGAT GGCCGACGCACACTCAGCGTTATTTCTGTAGAGCAACTTTTTGACGCTCAAATCGTAGATCAATTCTCCGAAGCTTACCC ACAGGAAGGAACTGATATGTCGACGATCGACGATGTAAGTATCCTAGAAGATGACAATACCGACATGCAGTTGGTGATTT TTAAGTTGGATAAAGAAGAATTTGGCATCTCCATTCATACCGTACAAGAAATTATCCGTATTCCAGAAAATATCAGCCGC GTTCCTAAAACCGATGATTTTATCGAAGGAGTGATTAATTTACGCGGTAACGTTTTACCTATCGTCGATATGCGTAAGCG TTTTCATCTACCCGAGATGGCACGCCATGAACGCCAACGTATCTTAGTTGTGAATTTTGAGAAGATTTCAACAGGTTTTA TCGTCGATTCCGTCAGTGAAGTATTAAGAATACCGGAATCCCAGCTGGAAGATGCGCCCGTGTTGAGCGAAGAGCAAGCA CAACTAATGCGCCAAATGGTCAATCTCAGCCCTCGAATGATAGGAGTACTGTCCGCCGATCAATTGATCAGTAATACCGA GATGTACAAGTTACACATGGCTGCAAACGATATGGATAGCTAA
Upstream 100 bases:
>100_bases GGCTCGTCAGCAAAGCTCAAGTACTTCGGAGCTGGCATCCGCAATTGAAAATATTGCCGCCGTTGCCGATGAACTTCAAT CAATCTGATTGAGGTGAACT
Downstream 100 bases:
>100_bases GTTTTAAGGCTGGAGGGAACATGAAGATTTTAGTTGTCGATGATTCTGCGTTAATGCGCACCACCATTAGCGACATATTG CAAAACATTCCGAATGCCCA
Product: putative purine-binding chemotaxis protein CheW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MTSEALVDNELEHEENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSAPLTPSYLIGLSNLRGQILPVLCLRTLLCMDR TSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLITNTIHSDNQIIQVLNCHRLLDNSVEEEL ELSTQRFNHLSSQSHFGDVTDEERDDDEDMRQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKT LPLVSLRTLFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKMGQANDISAICNLDD GRRTLSVISVEQLFDAQIVDQFSEAYPQEGTDMSTIDDVSILEDDNTDMQLVIFKLDKEEFGISIHTVQEIIRIPENISR VPKTDDFIEGVINLRGNVLPIVDMRKRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAPVLSEEQA QLMRQMVNLSPRMIGVLSADQLISNTEMYKLHMAANDMDS
Sequences:
>Translated_520_residues MTSEALVDNELEHEENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSAPLTPSYLIGLSNLRGQILPVLCLRTLLCMDR TSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLITNTIHSDNQIIQVLNCHRLLDNSVEEEL ELSTQRFNHLSSQSHFGDVTDEERDDDEDMRQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKT LPLVSLRTLFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKMGQANDISAICNLDD GRRTLSVISVEQLFDAQIVDQFSEAYPQEGTDMSTIDDVSILEDDNTDMQLVIFKLDKEEFGISIHTVQEIIRIPENISR VPKTDDFIEGVINLRGNVLPIVDMRKRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAPVLSEEQA QLMRQMVNLSPRMIGVLSADQLISNTEMYKLHMAANDMDS >Mature_519_residues TSEALVDNELEHEENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSAPLTPSYLIGLSNLRGQILPVLCLRTLLCMDRT SATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPTNTAGGKIDPTLITNTIHSDNQIIQVLNCHRLLDNSVEEELE LSTQRFNHLSSQSHFGDVTDEERDDDEDMRQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKTL PLVSLRTLFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVPEIMSKMGQANDISAICNLDDG RRTLSVISVEQLFDAQIVDQFSEAYPQEGTDMSTIDDVSILEDDNTDMQLVIFKLDKEEFGISIHTVQEIIRIPENISRV PKTDDFIEGVINLRGNVLPIVDMRKRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAPVLSEEQAQ LMRQMVNLSPRMIGVLSADQLISNTEMYKLHMAANDMDS
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=167, Percent_Identity=31.1377245508982, Blast_Score=89, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 58476; Mature: 58345
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSEALVDNELEHEENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSAPLTPSYLIGLS CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEHH NLRGQILPVLCLRTLLCMDRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPT HCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEECEEHHHEEEECCCCCCCCCCC NTAGGKIDPTLITNTIHSDNQIIQVLNCHRLLDNSVEEELELSTQRFNHLSSQSHFGDVT CCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC DEERDDDEDMRQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKT CCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHEEEEECCCCC LPLVSLRTLFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVP CCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EIMSKMGQANDISAICNLDDGRRTLSVISVEQLFDAQIVDQFSEAYPQEGTDMSTIDDVS HHHHHCCCCCCCEEEECCCCCCHHHHHEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE ILEDDNTDMQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLP EEECCCCCEEEEEEEECHHHHCEEHHHHHHHHHCCHHHHCCCCCHHHHHHHHHCCCCEEE IVDMRKRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAPVLSEEQA HHHHHHHCCCCHHHHHCCCEEEEEEEHHCCCCHHHHHHHHHHHCCHHHCCCCCCCCHHHH QLMRQMVNLSPRMIGVLSADQLISNTEMYKLHMAANDMDS HHHHHHHCCCCCEEEEECHHHHHCCCCEEEEEECCCCCCC >Mature Secondary Structure TSEALVDNELEHEENLTQYVNFMLGDELFALHMQEVEEIIRLPTTFSAPLTPSYLIGLS CCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHEHH NLRGQILPVLCLRTLLCMDRTSATEATRVIVITIGKTKIGFTVDRVVNVATPDPEMIKPT HCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEECEEHHHEEEECCCCCCCCCCC NTAGGKIDPTLITNTIHSDNQIIQVLNCHRLLDNSVEEELELSTQRFNHLSSQSHFGDVT CCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC DEERDDDEDMRQLVCCMVDGQEYAFPLEDTQEIVRIPEIITKVPLTESAILGVINLRGKT CCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHEEEEECCCCC LPLVSLRTLFGLPSISFSDSHRVLVVNISLSEKERLPVGVVVDAVREVIRLHVDVMDSVP CCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EIMSKMGQANDISAICNLDDGRRTLSVISVEQLFDAQIVDQFSEAYPQEGTDMSTIDDVS HHHHHCCCCCCCEEEECCCCCCHHHHHEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE ILEDDNTDMQLVIFKLDKEEFGISIHTVQEIIRIPENISRVPKTDDFIEGVINLRGNVLP EEECCCCCEEEEEEEECHHHHCEEHHHHHHHHHCCHHHHCCCCCHHHHHHHHHCCCCEEE IVDMRKRFHLPEMARHERQRILVVNFEKISTGFIVDSVSEVLRIPESQLEDAPVLSEEQA HHHHHHHCCCCHHHHHCCCEEEEEEEHHCCCCHHHHHHHHHHHCCHHHCCCCCCCCHHHH QLMRQMVNLSPRMIGVLSADQLISNTEMYKLHMAANDMDS HHHHHHHCCCCCEEEEECHHHHHCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]