| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147674208
Identifier: 147674208
GI number: 147674208
Start: 2446320
End: 2446817
Strand: Reverse
Name: 147674208
Synonym: VC0395_A2289
Alternate gene names: NA
Gene position: 2446817-2446320 (Counterclockwise)
Preceding gene: 147674258
Following gene: 147675721
Centisome position: 80.91
GC content: 54.22
Gene sequence:
>498_bases GTGGGCGAAGCTGAGGAGGTTTCGGCTATGCTAGTGTCACCGACCAATGTCAGTGTGCCGCTGATCGCCCCATCAGTGAA CGTGCAAACGGAGCAGGCCGCACGCGACAATCGCGTTCGCGAGCCAGTGACGCCAACCGTACAACTGGCCAAATCGAACG CTGAACGTAAGATCAAAGAGGATGATAAGCGTCGCAAGCAACCATCGTGGGATCCAGCAGAACACCCACGTTATGATATC GGCGGCGAAGCGGAGGCGCAGACCTCCCATCACGATGAACCGAAAAGTGAGCTTGAGCGATTGTTTGATCTGCTCGCACT CGCTTCGTACAGCCAAGAGCAAGGCAAAGGTTATGCGATGCGTTTTCGCTTACCTAAGCACATCATTGATGCGGCGATAA CAGAAGGCAAAATGGCGCGCCGGCGTGTCGTGATCAAATACTATTATGGTCACGCAGTGGCACCCAACACACCTTCAGAC GTGATTGCGGTTTTGTAG
Upstream 100 bases:
>100_bases TCGTTTGGGGGAGTGTGAATTTTGTCGCGCTGACCAAAATTTGACTCAATCATTTTCGGAACAGGTCGATAAATAGACTA ACCCGGAGTGAAAGCCGAGG
Downstream 100 bases:
>100_bases GTGAGTTATCTCGCGCAATAAAAATCCCCACAGCTGTGGGGATTTTTTTATGCAGCATAACGGTTAGGTCATGATGAAAT GTGTTTGTCGGCTATTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MGEAEEVSAMLVSPTNVSVPLIAPSVNVQTEQAARDNRVREPVTPTVQLAKSNAERKIKEDDKRRKQPSWDPAEHPRYDI GGEAEAQTSHHDEPKSELERLFDLLALASYSQEQGKGYAMRFRLPKHIIDAAITEGKMARRRVVIKYYYGHAVAPNTPSD VIAVL
Sequences:
>Translated_165_residues MGEAEEVSAMLVSPTNVSVPLIAPSVNVQTEQAARDNRVREPVTPTVQLAKSNAERKIKEDDKRRKQPSWDPAEHPRYDI GGEAEAQTSHHDEPKSELERLFDLLALASYSQEQGKGYAMRFRLPKHIIDAAITEGKMARRRVVIKYYYGHAVAPNTPSD VIAVL >Mature_164_residues GEAEEVSAMLVSPTNVSVPLIAPSVNVQTEQAARDNRVREPVTPTVQLAKSNAERKIKEDDKRRKQPSWDPAEHPRYDIG GEAEAQTSHHDEPKSELERLFDLLALASYSQEQGKGYAMRFRLPKHIIDAAITEGKMARRRVVIKYYYGHAVAPNTPSDV IAVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18446; Mature: 18315
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEAEEVSAMLVSPTNVSVPLIAPSVNVQTEQAARDNRVREPVTPTVQLAKSNAERKIKE CCCHHHHEEEEECCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHH DDKRRKQPSWDPAEHPRYDIGGEAEAQTSHHDEPKSELERLFDLLALASYSQEQGKGYAM HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCEEE RFRLPKHIIDAAITEGKMARRRVVIKYYYGHAVAPNTPSDVIAVL EEECHHHHHHHHHHCCHHHHHEEEEEEECCCEECCCCCCCEEEEC >Mature Secondary Structure GEAEEVSAMLVSPTNVSVPLIAPSVNVQTEQAARDNRVREPVTPTVQLAKSNAERKIKE CCHHHHEEEEECCCCCCEEEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHH DDKRRKQPSWDPAEHPRYDIGGEAEAQTSHHDEPKSELERLFDLLALASYSQEQGKGYAM HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCEEE RFRLPKHIIDAAITEGKMARRRVVIKYYYGHAVAPNTPSDVIAVL EEECHHHHHHHHHHCCHHHHHEEEEEEECCCEECCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA