| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is mrp [H]
Identifier: 147674192
GI number: 147674192
Start: 595232
End: 596380
Strand: Direct
Name: mrp [H]
Synonym: VC0395_A0555
Alternate gene names: 147674192
Gene position: 595232-596380 (Clockwise)
Preceding gene: 147674560
Following gene: 147674003
Centisome position: 19.68
GC content: 51.44
Gene sequence:
>1149_bases TTGATTCCCCTATCTTTTTCGGGGTTCAGTTGCTCTTTGAGCGGTGGTAGCATGGGCAAAAAAGGGGAAGTTATGCAATC TATTCAATCCAAACAGGATCTCTGCCGCTGGCTGAGCCAATTTTCGCATCCCGATTTAATCAGTGATTGGGCGATGTCGC CTTCTATCGTCACCATCACGCCCAACCAGCAAGTCAATGTGCAATTGCCTTTTGCTGCCCATTCACTGCTGACTGAATTA AGTGATTGGATTGCCAAACAGCAAGCCAGTGGAGCCGTTGCGCCAGTAACCTTTGACATTCAAGTAAAACCTCAAGCGCT GGAAACTCGCGTAAATGCGGCAGTCAAAGGGGTGAAAAACATTATTGCGGTGACGTCAGGCAAAGGTGGCGTGGGTAAAT CCACGACGGCGGTGAATCTTGCACTCGCGATTGCGAAGTCAGGAGGCAAAGTCGGTCTATTGGATGCCGATATTTACGGC CCCTCAGTACCGCTGATGCTCGGTAAAACCAAAGCAAAACCTGAAGTGCGTGACAATAAATGGATGCAGCCAATTGAGGC GCACGGCATTGCCACGCATTCGATTGGTTATTTGGTGGATGAGGCGGATGCGGCGATTTGGCGTGGACCAATGGCTTCTA AGGCGCTGGCACAGTTACTCAATGAAACCGAGTGGCCGGATTTGGATTATCTGGTGATCGATATGCCGCCGGGCACCGGA GATATTCAGCTCACCCTCGCGCAGCAAATTCCGGTGACCGGCGCAGTGATTGTGACCACACCGCAAGATTTAGCCTTAGC CGATGCTCGCAAAGGCGCGGCGATGTTTGCCAAAGTGGACGTGCCTGTGATTGGGTTGGTGGAAAACATGAGTTACCACA TCTGTAGTCATTGCGGCGAAAAAGAGCATATTTTTGGGGTGGGCGGAGCGCAAACTCTTGCCGCCGAATTTGGCTTATCC CTGCTGGCACAAATTCCGCTGCATATTGACATGCGAGAGGATATTGATGCGGGAGTTCCGACTGTGGTGGCGCGTCCCAA TAGCGAGCATACCGAACGCTATTTAGCGTTGGCGCAGCGTGTGTGTGCTTCGCTGTTCTGGCAAGGCAAAGCCAAACCAG AGAGCATTCAAATCCAGTGGGTTAATTAA
Upstream 100 bases:
>100_bases TGGATCGTTTGCCATACTTAATATTCGCTTTTCTTGATAGGGACCAAATTGAAGCGATAATACTACCCTAAGCACGCAGT CACGCCAAGGCGCGCAACAG
Downstream 100 bases:
>100_bases ATTCTCTAACAGCCAGAGTGAATGTAATCGTTTGCTCTGGTTTAATCTTATCCATCCGACATTTATGTGGCTGTTTTTGC CTAATGCAAACTGGTATCTC
Product: mrp protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MIPLSFSGFSCSLSGGSMGKKGEVMQSIQSKQDLCRWLSQFSHPDLISDWAMSPSIVTITPNQQVNVQLPFAAHSLLTEL SDWIAKQQASGAVAPVTFDIQVKPQALETRVNAAVKGVKNIIAVTSGKGGVGKSTTAVNLALAIAKSGGKVGLLDADIYG PSVPLMLGKTKAKPEVRDNKWMQPIEAHGIATHSIGYLVDEADAAIWRGPMASKALAQLLNETEWPDLDYLVIDMPPGTG DIQLTLAQQIPVTGAVIVTTPQDLALADARKGAAMFAKVDVPVIGLVENMSYHICSHCGEKEHIFGVGGAQTLAAEFGLS LLAQIPLHIDMREDIDAGVPTVVARPNSEHTERYLALAQRVCASLFWQGKAKPESIQIQWVN
Sequences:
>Translated_382_residues MIPLSFSGFSCSLSGGSMGKKGEVMQSIQSKQDLCRWLSQFSHPDLISDWAMSPSIVTITPNQQVNVQLPFAAHSLLTEL SDWIAKQQASGAVAPVTFDIQVKPQALETRVNAAVKGVKNIIAVTSGKGGVGKSTTAVNLALAIAKSGGKVGLLDADIYG PSVPLMLGKTKAKPEVRDNKWMQPIEAHGIATHSIGYLVDEADAAIWRGPMASKALAQLLNETEWPDLDYLVIDMPPGTG DIQLTLAQQIPVTGAVIVTTPQDLALADARKGAAMFAKVDVPVIGLVENMSYHICSHCGEKEHIFGVGGAQTLAAEFGLS LLAQIPLHIDMREDIDAGVPTVVARPNSEHTERYLALAQRVCASLFWQGKAKPESIQIQWVN >Mature_382_residues MIPLSFSGFSCSLSGGSMGKKGEVMQSIQSKQDLCRWLSQFSHPDLISDWAMSPSIVTITPNQQVNVQLPFAAHSLLTEL SDWIAKQQASGAVAPVTFDIQVKPQALETRVNAAVKGVKNIIAVTSGKGGVGKSTTAVNLALAIAKSGGKVGLLDADIYG PSVPLMLGKTKAKPEVRDNKWMQPIEAHGIATHSIGYLVDEADAAIWRGPMASKALAQLLNETEWPDLDYLVIDMPPGTG DIQLTLAQQIPVTGAVIVTTPQDLALADARKGAAMFAKVDVPVIGLVENMSYHICSHCGEKEHIFGVGGAQTLAAEFGLS LLAQIPLHIDMREDIDAGVPTVVARPNSEHTERYLALAQRVCASLFWQGKAKPESIQIQWVN
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=253, Percent_Identity=53.7549407114625, Blast_Score=269, Evalue=3e-72, Organism=Homo sapiens, GI118572611, Length=265, Percent_Identity=35.8490566037736, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI6912540, Length=255, Percent_Identity=37.2549019607843, Blast_Score=169, Evalue=3e-42, Organism=Escherichia coli, GI87082045, Length=350, Percent_Identity=55.1428571428571, Blast_Score=365, Evalue=1e-102, Organism=Caenorhabditis elegans, GI25143050, Length=270, Percent_Identity=37.037037037037, Blast_Score=172, Evalue=3e-43, Organism=Saccharomyces cerevisiae, GI6322188, Length=236, Percent_Identity=37.7118644067797, Blast_Score=174, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6321347, Length=288, Percent_Identity=35.0694444444444, Blast_Score=160, Evalue=3e-40, Organism=Drosophila melanogaster, GI221511043, Length=268, Percent_Identity=40.6716417910448, Blast_Score=211, Evalue=6e-55, Organism=Drosophila melanogaster, GI24667611, Length=253, Percent_Identity=41.501976284585, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI19921440, Length=236, Percent_Identity=37.2881355932203, Blast_Score=140, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR000808 [H]
Pfam domain/function: PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 40804; Mature: 40804
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPLSFSGFSCSLSGGSMGKKGEVMQSIQSKQDLCRWLSQFSHPDLISDWAMSPSIVTIT CCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEC PNQQVNVQLPFAAHSLLTELSDWIAKQQASGAVAPVTFDIQVKPQALETRVNAAVKGVKN CCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHH IIAVTSGKGGVGKSTTAVNLALAIAKSGGKVGLLDADIYGPSVPLMLGKTKAKPEVRDNK EEEEECCCCCCCCCCHHEEEEEEEECCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCC WMQPIEAHGIATHSIGYLVDEADAAIWRGPMASKALAQLLNETEWPDLDYLVIDMPPGTG CCCCHHHCCEEEHHHHEEEECCCHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCC DIQLTLAQQIPVTGAVIVTTPQDLALADARKGAAMFAKVDVPVIGLVENMSYHICSHCGE CEEEEEECCCCCCCEEEEECCCCHHHHHCCCCCEEEEEECCCEEEHHHHCHHHHHHCCCC KEHIFGVGGAQTLAAEFGLSLLAQIPLHIDMREDIDAGVPTVVARPNSEHTERYLALAQR CCEEEECCCHHHHHHHHHHHHHHHCCEEEECHHHCCCCCCEEEECCCCHHHHHHHHHHHH VCASLFWQGKAKPESIQIQWVN HHHHHHHCCCCCCCEEEEEEEC >Mature Secondary Structure MIPLSFSGFSCSLSGGSMGKKGEVMQSIQSKQDLCRWLSQFSHPDLISDWAMSPSIVTIT CCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEC PNQQVNVQLPFAAHSLLTELSDWIAKQQASGAVAPVTFDIQVKPQALETRVNAAVKGVKN CCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHH IIAVTSGKGGVGKSTTAVNLALAIAKSGGKVGLLDADIYGPSVPLMLGKTKAKPEVRDNK EEEEECCCCCCCCCCHHEEEEEEEECCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCC WMQPIEAHGIATHSIGYLVDEADAAIWRGPMASKALAQLLNETEWPDLDYLVIDMPPGTG CCCCHHHCCEEEHHHHEEEECCCHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCC DIQLTLAQQIPVTGAVIVTTPQDLALADARKGAAMFAKVDVPVIGLVENMSYHICSHCGE CEEEEEECCCCCCCEEEEECCCCHHHHHCCCCCEEEEEECCCEEEHHHHCHHHHHHCCCC KEHIFGVGGAQTLAAEFGLSLLAQIPLHIDMREDIDAGVPTVVARPNSEHTERYLALAQR CCEEEECCCHHHHHHHHHHHHHHHCCEEEECHHHCCCCCCEEEECCCCHHHHHHHHHHHH VCASLFWQGKAKPESIQIQWVN HHHHHHHCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]