| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is stcE [H]
Identifier: 147674173
GI number: 147674173
Start: 484366
End: 487239
Strand: Direct
Name: stcE [H]
Synonym: VC0395_A0455
Alternate gene names: 147674173
Gene position: 484366-487239 (Clockwise)
Preceding gene: 147673097
Following gene: 147673705
Centisome position: 16.02
GC content: 47.15
Gene sequence:
>2874_bases ATGACGTCTCACTATATTGCACTTGCTGTCGGTCTTTTGTCGTTGAGTAGTAACGTGGTTCAAGCCACAACGAATGAAGC CGAAGGGTGTATTATCAGCCGCCTGAATGGCGAAAAATATTGTTTAAAAGTGGGAGAGCGCTCGGGCTATTCCCTCCCTA GCTGGATTTATGCTCATCCAGTAGATGTTCAGGCTCCGAGTGGTGTCTCTGTCATGCTAAGTGATTGGGATAACCTGTCT TATAACCGTTTGGCGGTGTTCGATCGTTATACTGGTAACGAAGATCTTAAGAATGTCAAAGCCTACAACGGTGCTTATTT AGATTTTTCTAAACCACGTTCAATGCGAGTACTGGCTTCTGAAACTTATCCTGAGGCTTGTATTGTGAGTCGTCAAACGG GTGAACGTTTCTGTTTAAAAGAGGGTGAGCGCTCTGGTTACTCGCTACCAGCGTACATTTATGGCCATGAGGTTGATGTT GAAGCACCTCTAGGTTTGGGGGTCATGCTGAGTGATTGGGATAACCTTTCATACAACCGTCTTGCGGTGTTTGGTGGTAA CACCCAGAACGAGCAAATGCGTGCAGTCAAAGCCTACAATGGCGAAACGCTTGATTTCTCAAAGCCACGCTCAATGCGCG TTGTCCCTTATGACGGTGACAGCTCGGCACTCAATATGAAGCTTAAGTGGTCTTGGCAAGGCAGTGCTTTCCAACCTAAC TCTAACCAAGTGATGGTAACGCCTATTGTCGCGCAACTGAACGATGACAATGGTGATGGCAAGATTGATGAAAAAGATGT CGCAGATTTGATCGTAGTGACGTTTGAAGGAAACAAATACGCCAATGGCGGCTTAGTGCGTGCTTTAAGTGGTGTGGATG GTTCTGAGCTATGGAGCTATGCGAATGGTGGTGTGATCGCGGATGCGCGTTATTCGCCAGCGGTAGGCGATCTGGACGGT GACGGAATCGTTGAGATTGTGACTACCAACAATCGCGATCAATTCATCACGATTTTGGATAACCAAGGCAACATTAAAAA ACAGATCCCAACGACAGAAAGTGGCTGGCGTATTGTCGGTGATATCACGTTGGCGGATTTAGACCACGATGGCAGTGTAG AAATTCTGGCTGCAGATGGTGTGTATAACTACCACAGCGGATTGGTCTTTAATCATCCTTGGGCGCCGTCCTCGATCAAC GTTGATGTCGATGGCGATCAGCAACAAGAAGTTTTTTCGGGTGGTACTCTGTTTCAAAATAACGGTGCGATCAATTGGCA GTATCAAGCGAACGATGCGGTTTGGTTCTCTTCGCTAGTTAACTTAGATAATGATGCTGAGCCTGAGATTGTGGCCTCTG TACCTGCCACTTTTGCGACAGGCGATAACGCACGTTTTGCTGTGCTAGAACACGATGGCACCATTAAATGGGAAATCAAC AACACAGCAAACCCTGGTGGTGGTGTGCAGGCGGTATCTAACTTTTTAGGTAAAGCTCAAGCCGTTGAAACGAGTGAGTT CTCAAAAGTCTATGGTTATCAGCCTAATAACAATCCTGCTTCGATTGCTTTGGCCGTCGATGGCAAGATCTCGGTTCGTT CAGGATTTGCGATTGATGCGATTGGTGCTTCTGCTTCGACGTTAGTCGGTGGTACGGGAGGCAATCTTAATGCTGCGGTT AACGTCAAAGATATTAAGGCGATTGACCTGACTTGGGGTAAATACTATTGGGGTGGTTATCATCTATTAGCGCTCGATTT TAGAATGAGCAATGGTAGCGTGATTTCTATGGGCTCTAAAAACTATGCTTACTCCAAGCAGACCGAGCGCTTTACTGTGC CAGCAGGTAGCCGCATTAAAGGCATCAAAGCTTGGACCGCGGGTTGGTTGTTGGACGGTGTTCAATTTGAGTTAGCTACG CAAAATGGTACCAATGATCTGGATGTAAAAGGGATTGTTTACGCAGGCTATGCCGCTGTCGATATGTATAACAGCAAAGG CGAGCGTGTTTGGTCTGTGGCGAATGACGACACTGGCAGCGGTAAAATTGGTGTCTCTGCGTATGACTTTGATAACGATG GTATCGATGAAGTACTCGTGCAAGATCATGCACGCGTGCGTGTATTAGATGGCAAAACGGGCAAAGAACGTGCGTCGCTA GCGCACTCCACGGCAACACTTTGGGAATACCCTATCGTGGTCGATCTGGAAGGTGATAACAACGCAGAGTTGATCGTGGC AGCGAACGATTTCGATCGCCAATATTCGATTAACCACGGGGTTTATGTTTACCAATCAGCGGACAGTTCGAAACCTTGGA AGAATGCGACTCGTATTTGGAACCAGCATGCTTTCCATCTCACCAACATCAATCAAGATGGTACTTTGCCGACTTTTGTT GAGCCAAGTTGGTTGAGCCATAATACCTACCGTTCAAGCACATTACGCGCTGCAGTGGGTGGTGAGTCTCCAATTTTCGG TTACTCAAATACTCAACAATCGCAACGTGTCGTGACGGCGGATAACCAGATGTATCTGCGTTCAGGTTTTGCGATCGATG CCATTGGTACTACCGTCAACAACTTAGTCGGCGGGCCGGTGCAAGGCACTAACGGTGGTGTGTTAAGAGCACCGATTGCA CTTGATCAATTGCAATCAGTGGAGGTCACCTCTGGCCTTTATAACTGGGGTGGTTACCACATCGTGGCGATTAAATTCAC GATGAAGGATGGCTCTAGCGTGTTATTGGGCTCAACCCACTATGCGAGCAATAAGAAAGTGGAAACATACACTGTGCCGC AAGGTAAACGTATCAAGCAGATTAATGTATGGACCGGCGGTTGGTTAGTTGAAGGCTTCCAGTTTGTCTACTAA
Upstream 100 bases:
>100_bases CCAGTTCCTAGGTTTTAAAATAATAATTACAACGATCAACCGGATGCATATTGTTTCTGGCTTTGAATAAAATTAACACA AGGTAAAGGGAGTCTTACAA
Downstream 100 bases:
>100_bases CGACTCATCGCTTTACTGAACTGCGAATAAAAACACCCCGATGCTTCGGGGTGTTTTTTTATTGTCATCCCTAAACTCCG CTTTGAACGTAAGTGATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: Mucinase; Neutral zinc metalloprotease stcE; Secreted protease of C1 esterase inhibitor from EHEC [H]
Number of amino acids: Translated: 957; Mature: 956
Protein sequence:
>957_residues MTSHYIALAVGLLSLSSNVVQATTNEAEGCIISRLNGEKYCLKVGERSGYSLPSWIYAHPVDVQAPSGVSVMLSDWDNLS YNRLAVFDRYTGNEDLKNVKAYNGAYLDFSKPRSMRVLASETYPEACIVSRQTGERFCLKEGERSGYSLPAYIYGHEVDV EAPLGLGVMLSDWDNLSYNRLAVFGGNTQNEQMRAVKAYNGETLDFSKPRSMRVVPYDGDSSALNMKLKWSWQGSAFQPN SNQVMVTPIVAQLNDDNGDGKIDEKDVADLIVVTFEGNKYANGGLVRALSGVDGSELWSYANGGVIADARYSPAVGDLDG DGIVEIVTTNNRDQFITILDNQGNIKKQIPTTESGWRIVGDITLADLDHDGSVEILAADGVYNYHSGLVFNHPWAPSSIN VDVDGDQQQEVFSGGTLFQNNGAINWQYQANDAVWFSSLVNLDNDAEPEIVASVPATFATGDNARFAVLEHDGTIKWEIN NTANPGGGVQAVSNFLGKAQAVETSEFSKVYGYQPNNNPASIALAVDGKISVRSGFAIDAIGASASTLVGGTGGNLNAAV NVKDIKAIDLTWGKYYWGGYHLLALDFRMSNGSVISMGSKNYAYSKQTERFTVPAGSRIKGIKAWTAGWLLDGVQFELAT QNGTNDLDVKGIVYAGYAAVDMYNSKGERVWSVANDDTGSGKIGVSAYDFDNDGIDEVLVQDHARVRVLDGKTGKERASL AHSTATLWEYPIVVDLEGDNNAELIVAANDFDRQYSINHGVYVYQSADSSKPWKNATRIWNQHAFHLTNINQDGTLPTFV EPSWLSHNTYRSSTLRAAVGGESPIFGYSNTQQSQRVVTADNQMYLRSGFAIDAIGTTVNNLVGGPVQGTNGGVLRAPIA LDQLQSVEVTSGLYNWGGYHIVAIKFTMKDGSSVLLGSTHYASNKKVETYTVPQGKRIKQINVWTGGWLVEGFQFVY
Sequences:
>Translated_957_residues MTSHYIALAVGLLSLSSNVVQATTNEAEGCIISRLNGEKYCLKVGERSGYSLPSWIYAHPVDVQAPSGVSVMLSDWDNLS YNRLAVFDRYTGNEDLKNVKAYNGAYLDFSKPRSMRVLASETYPEACIVSRQTGERFCLKEGERSGYSLPAYIYGHEVDV EAPLGLGVMLSDWDNLSYNRLAVFGGNTQNEQMRAVKAYNGETLDFSKPRSMRVVPYDGDSSALNMKLKWSWQGSAFQPN SNQVMVTPIVAQLNDDNGDGKIDEKDVADLIVVTFEGNKYANGGLVRALSGVDGSELWSYANGGVIADARYSPAVGDLDG DGIVEIVTTNNRDQFITILDNQGNIKKQIPTTESGWRIVGDITLADLDHDGSVEILAADGVYNYHSGLVFNHPWAPSSIN VDVDGDQQQEVFSGGTLFQNNGAINWQYQANDAVWFSSLVNLDNDAEPEIVASVPATFATGDNARFAVLEHDGTIKWEIN NTANPGGGVQAVSNFLGKAQAVETSEFSKVYGYQPNNNPASIALAVDGKISVRSGFAIDAIGASASTLVGGTGGNLNAAV NVKDIKAIDLTWGKYYWGGYHLLALDFRMSNGSVISMGSKNYAYSKQTERFTVPAGSRIKGIKAWTAGWLLDGVQFELAT QNGTNDLDVKGIVYAGYAAVDMYNSKGERVWSVANDDTGSGKIGVSAYDFDNDGIDEVLVQDHARVRVLDGKTGKERASL AHSTATLWEYPIVVDLEGDNNAELIVAANDFDRQYSINHGVYVYQSADSSKPWKNATRIWNQHAFHLTNINQDGTLPTFV EPSWLSHNTYRSSTLRAAVGGESPIFGYSNTQQSQRVVTADNQMYLRSGFAIDAIGTTVNNLVGGPVQGTNGGVLRAPIA LDQLQSVEVTSGLYNWGGYHIVAIKFTMKDGSSVLLGSTHYASNKKVETYTVPQGKRIKQINVWTGGWLVEGFQFVY >Mature_956_residues TSHYIALAVGLLSLSSNVVQATTNEAEGCIISRLNGEKYCLKVGERSGYSLPSWIYAHPVDVQAPSGVSVMLSDWDNLSY NRLAVFDRYTGNEDLKNVKAYNGAYLDFSKPRSMRVLASETYPEACIVSRQTGERFCLKEGERSGYSLPAYIYGHEVDVE APLGLGVMLSDWDNLSYNRLAVFGGNTQNEQMRAVKAYNGETLDFSKPRSMRVVPYDGDSSALNMKLKWSWQGSAFQPNS NQVMVTPIVAQLNDDNGDGKIDEKDVADLIVVTFEGNKYANGGLVRALSGVDGSELWSYANGGVIADARYSPAVGDLDGD GIVEIVTTNNRDQFITILDNQGNIKKQIPTTESGWRIVGDITLADLDHDGSVEILAADGVYNYHSGLVFNHPWAPSSINV DVDGDQQQEVFSGGTLFQNNGAINWQYQANDAVWFSSLVNLDNDAEPEIVASVPATFATGDNARFAVLEHDGTIKWEINN TANPGGGVQAVSNFLGKAQAVETSEFSKVYGYQPNNNPASIALAVDGKISVRSGFAIDAIGASASTLVGGTGGNLNAAVN VKDIKAIDLTWGKYYWGGYHLLALDFRMSNGSVISMGSKNYAYSKQTERFTVPAGSRIKGIKAWTAGWLLDGVQFELATQ NGTNDLDVKGIVYAGYAAVDMYNSKGERVWSVANDDTGSGKIGVSAYDFDNDGIDEVLVQDHARVRVLDGKTGKERASLA HSTATLWEYPIVVDLEGDNNAELIVAANDFDRQYSINHGVYVYQSADSSKPWKNATRIWNQHAFHLTNINQDGTLPTFVE PSWLSHNTYRSSTLRAAVGGESPIFGYSNTQQSQRVVTADNQMYLRSGFAIDAIGTTVNNLVGGPVQGTNGGVLRAPIAL DQLQSVEVTSGLYNWGGYHIVAIKFTMKDGSSVLLGSTHYASNKKVETYTVPQGKRIKQINVWTGGWLVEGFQFVY
Specific function: Virulence factor that contributes to intimate adherence of enterohemorrhagic E.coli (EHEC) O157:H7 to host cells. Is able to cleave the secreted human mucin 7 (MUC7) and the glycoprotein 340 (DMBT1/GP340). Also cleaves human C1 inhibitor (SERPING1), a reg
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted. Note=Secreted via the etp type II secretion pathway [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 peptidase M66 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019503 [H]
Pfam domain/function: PF10462 Peptidase_M66 [H]
EC number: NA
Molecular weight: Translated: 104005; Mature: 103874
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSHYIALAVGLLSLSSNVVQATTNEAEGCIISRLNGEKYCLKVGERSGYSLPSWIYAHP CCCCEEEHHHHHHHHCCCEEEEECCCCCCEEEEECCCCEEEEEECCCCCCCCCCEEEECC VDVQAPSGVSVMLSDWDNLSYNRLAVFDRYTGNEDLKNVKAYNGAYLDFSKPRSMRVLAS CCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHCCCEEEECCCCCCEEEEEC ETYPEACIVSRQTGERFCLKEGERSGYSLPAYIYGHEVDVEAPLGLGVMLSDWDNLSYNR CCCCCEEEEECCCCCEEHHCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCCCCE LAVFGGNTQNEQMRAVKAYNGETLDFSKPRSMRVVPYDGDSSALNMKLKWSWQGSAFQPN EEEECCCCCCCCEEEEEECCCCEEECCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCC SNQVMVTPIVAQLNDDNGDGKIDEKDVADLIVVTFEGNKYANGGLVRALSGVDGSELWSY CCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCEECCCCEEEEECCCCHHHHHHH ANGGVIADARYSPAVGDLDGDGIVEIVTTNNRDQFITILDNQGNIKKQIPTTESGWRIVG CCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCEEEECCCCCCCCEEEE DITLADLDHDGSVEILAADGVYNYHSGLVFNHPWAPSSINVDVDGDQQQEVFSGGTLFQN EEEEEECCCCCCEEEEEECCEEECCCCEEEECCCCCCEEEEEECCCCHHHHHCCCCEEEC NGAINWQYQANDAVWFSSLVNLDNDAEPEIVASVPATFATGDNARFAVLEHDGTIKWEIN CCEEEEEEECCCCEEEHHHHCCCCCCCCCEEEECCCEEECCCCCEEEEEECCCEEEEEEC NTANPGGGVQAVSNFLGKAQAVETSEFSKVYGYQPNNNPASIALAVDGKISVRSGFAIDA CCCCCCCHHHHHHHHHCCCCEECCCCHHHHCCCCCCCCCEEEEEEECCEEEEECCCEEEE IGASASTLVGGTGGNLNAAVNVKDIKAIDLTWGKYYWGGYHLLALDFRMSNGSVISMGSK CCCCCEEEEECCCCCCEEEEEEEEEEEEEEECCCEEECCEEEEEEEEEECCCCEEEECCC NYAYSKQTERFTVPAGSRIKGIKAWTAGWLLDGVQFELATQNGTNDLDVKGIVYAGYAAV CCCCCCCCCEEECCCCCCEEEEEEEECCEEECCEEEEEEECCCCCCCCEEEEEEECEEEE DMYNSKGERVWSVANDDTGSGKIGVSAYDFDNDGIDEVLVQDHARVRVLDGKTGKERASL EEECCCCCEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHCCCCEEEEEECCCCCHHHHH AHSTATLWEYPIVVDLEGDNNAELIVAANDFDRQYSINHGVYVYQSADSSKPWKNATRIW HHCCCEEEECCEEEEEECCCCCEEEEEECCCCCEEECCCCEEEEECCCCCCCCHHHHHHH NQHAFHLTNINQDGTLPTFVEPSWLSHNTYRSSTLRAAVGGESPIFGYSNTQQSQRVVTA CCCEEEEEECCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCEEEEE DNQMYLRSGFAIDAIGTTVNNLVGGPVQGTNGGVLRAPIALDQLQSVEVTSGLYNWGGYH CCEEEEECCCEEEEHHHHHHHHCCCCCCCCCCCEEECCEEHHHHCCEEECCCEECCCCEE IVAIKFTMKDGSSVLLGSTHYASNKKVETYTVPQGKRIKQINVWTGGWLVEGFQFVY EEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEECCEEECCEEECC >Mature Secondary Structure TSHYIALAVGLLSLSSNVVQATTNEAEGCIISRLNGEKYCLKVGERSGYSLPSWIYAHP CCCEEEHHHHHHHHCCCEEEEECCCCCCEEEEECCCCEEEEEECCCCCCCCCCEEEECC VDVQAPSGVSVMLSDWDNLSYNRLAVFDRYTGNEDLKNVKAYNGAYLDFSKPRSMRVLAS CCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHCCCEEEECCCCCCEEEEEC ETYPEACIVSRQTGERFCLKEGERSGYSLPAYIYGHEVDVEAPLGLGVMLSDWDNLSYNR CCCCCEEEEECCCCCEEHHCCCCCCCCCCEEEEEEEEEEEECCCCCEEEEECCCCCCCCE LAVFGGNTQNEQMRAVKAYNGETLDFSKPRSMRVVPYDGDSSALNMKLKWSWQGSAFQPN EEEECCCCCCCCEEEEEECCCCEEECCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCC SNQVMVTPIVAQLNDDNGDGKIDEKDVADLIVVTFEGNKYANGGLVRALSGVDGSELWSY CCCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCEECCCCEEEEECCCCHHHHHHH ANGGVIADARYSPAVGDLDGDGIVEIVTTNNRDQFITILDNQGNIKKQIPTTESGWRIVG CCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCEEEECCCCCCCCEEEE DITLADLDHDGSVEILAADGVYNYHSGLVFNHPWAPSSINVDVDGDQQQEVFSGGTLFQN EEEEEECCCCCCEEEEEECCEEECCCCEEEECCCCCCEEEEEECCCCHHHHHCCCCEEEC NGAINWQYQANDAVWFSSLVNLDNDAEPEIVASVPATFATGDNARFAVLEHDGTIKWEIN CCEEEEEEECCCCEEEHHHHCCCCCCCCCEEEECCCEEECCCCCEEEEEECCCEEEEEEC NTANPGGGVQAVSNFLGKAQAVETSEFSKVYGYQPNNNPASIALAVDGKISVRSGFAIDA CCCCCCCHHHHHHHHHCCCCEECCCCHHHHCCCCCCCCCEEEEEEECCEEEEECCCEEEE IGASASTLVGGTGGNLNAAVNVKDIKAIDLTWGKYYWGGYHLLALDFRMSNGSVISMGSK CCCCCEEEEECCCCCCEEEEEEEEEEEEEEECCCEEECCEEEEEEEEEECCCCEEEECCC NYAYSKQTERFTVPAGSRIKGIKAWTAGWLLDGVQFELATQNGTNDLDVKGIVYAGYAAV CCCCCCCCCEEECCCCCCEEEEEEEECCEEECCEEEEEEECCCCCCCCEEEEEEECEEEE DMYNSKGERVWSVANDDTGSGKIGVSAYDFDNDGIDEVLVQDHARVRVLDGKTGKERASL EEECCCCCEEEEECCCCCCCCEEEEEEEECCCCCHHHHHHCCCCEEEEEECCCCCHHHHH AHSTATLWEYPIVVDLEGDNNAELIVAANDFDRQYSINHGVYVYQSADSSKPWKNATRIW HHCCCEEEECCEEEEEECCCCCEEEEEECCCCCEEECCCCEEEEECCCCCCCCHHHHHHH NQHAFHLTNINQDGTLPTFVEPSWLSHNTYRSSTLRAAVGGESPIFGYSNTQQSQRVVTA CCCEEEEEECCCCCCCCCEECCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCEEEEE DNQMYLRSGFAIDAIGTTVNNLVGGPVQGTNGGVLRAPIALDQLQSVEVTSGLYNWGGYH CCEEEEECCCEEEEHHHHHHHHCCCCCCCCCCCEEECCEEHHHHCCEEECCCEECCCCEE IVAIKFTMKDGSSVLLGSTHYASNKKVETYTVPQGKRIKQINVWTGGWLVEGFQFVY EEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEECCEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9722640; 9628576; 12123444 [H]