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The map label for this gene is rseC [C]

Identifier: 147674010

GI number: 147674010

Start: 2200281

End: 2200751

Strand: Reverse

Name: rseC [C]

Synonym: VC0395_A2042

Alternate gene names: 147674010

Gene position: 2200751-2200281 (Counterclockwise)

Preceding gene: 147674099

Following gene: 147673257

Centisome position: 72.77

GC content: 51.17

Gene sequence:

>471_bases
ATGATGACGGCATTGGCTACGGTGACCAAAGTGGTACCCGCTCAACAAGGATTTCAAGTGACGCTGAGTTGTGAACAGCA
AACCAGTTGCAGCAGTTGCCAATCCTCGAAAAGCTGCGGTACGGGCATCGTCTCTAAAGCGTTCGGTAACAAAACCCTAT
TCTGGCGTTTACAAACCACACAAGCCCTAGAAGCGGGTGAGGTGGTCGAGATTGGTTTGCCGGAAAAGAGCGTGCTGCAG
TCGGCGGCGCTCGTCTATTTATTACCGCTGTTTTTCATGATGCTGGGTGCATGGCTTGGCGATCAATGGCTGGCCCCTAT
GTTGGGTTTTGGAGAGGGGATAGTGATCCTTACTGCACTGCTCTTTATTGCGCTCGGTGTATGGGTTGCCAAACATTATG
CGAAAGTGCTGGAGCTACGCTCTCAGCAGCAAGTGGTTTTGTTACGAAAACTGGGTATCCCGGTTGCCTAA

Upstream 100 bases:

>100_bases
AAGGTGAGAATGAAATTTCGGTAGTGGGCGATATTCCTCCTGCGACTGCGCAACGTATCGCTCAATCGGTGATGTTTGGT
GTCGGTGGAGTGAAAGCGCA

Downstream 100 bases:

>100_bases
ATTATGATGCGAACCCCAACGAAATTGGGTAGAATCGCCCAACTTGAATGAATAGCCGCCAACGCGGCTTTTCTATGTCC
TTATTATTTAAGAGTTTAGT

Product: sigma-E factor regulatory protein RseC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MMTALATVTKVVPAQQGFQVTLSCEQQTSCSSCQSSKSCGTGIVSKAFGNKTLFWRLQTTQALEAGEVVEIGLPEKSVLQ
SAALVYLLPLFFMMLGAWLGDQWLAPMLGFGEGIVILTALLFIALGVWVAKHYAKVLELRSQQQVVLLRKLGIPVA

Sequences:

>Translated_156_residues
MMTALATVTKVVPAQQGFQVTLSCEQQTSCSSCQSSKSCGTGIVSKAFGNKTLFWRLQTTQALEAGEVVEIGLPEKSVLQ
SAALVYLLPLFFMMLGAWLGDQWLAPMLGFGEGIVILTALLFIALGVWVAKHYAKVLELRSQQQVVLLRKLGIPVA
>Mature_156_residues
MMTALATVTKVVPAQQGFQVTLSCEQQTSCSSCQSSKSCGTGIVSKAFGNKTLFWRLQTTQALEAGEVVEIGLPEKSVLQ
SAALVYLLPLFFMMLGAWLGDQWLAPMLGFGEGIVILTALLFIALGVWVAKHYAKVLELRSQQQVVLLRKLGIPVA

Specific function: Seems To Modulate The Activity Of Rpoe (Sigma-E). [C]

COG id: COG3086

COG function: function code T; Positive regulator of sigma E activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007359 [H]

Pfam domain/function: PF04246 RseC_MucC [H]

EC number: NA

Molecular weight: Translated: 16861; Mature: 16861

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTALATVTKVVPAQQGFQVTLSCEQQTSCSSCQSSKSCGTGIVSKAFGNKTLFWRLQTT
CCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCCCHHHHHHCCCCEEEEEECCH
QALEAGEVVEIGLPEKSVLQSAALVYLLPLFFMMLGAWLGDQWLAPMLGFGEGIVILTAL
HHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHH
LFIALGVWVAKHYAKVLELRSQQQVVLLRKLGIPVA
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MMTALATVTKVVPAQQGFQVTLSCEQQTSCSSCQSSKSCGTGIVSKAFGNKTLFWRLQTT
CCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCCCCCCHHHHHHCCCCEEEEEECCH
QALEAGEVVEIGLPEKSVLQSAALVYLLPLFFMMLGAWLGDQWLAPMLGFGEGIVILTAL
HHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHH
LFIALGVWVAKHYAKVLELRSQQQVVLLRKLGIPVA
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]