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The map label for this gene is rseB [H]

Identifier: 147674099

GI number: 147674099

Start: 2200748

End: 2201698

Strand: Reverse

Name: rseB [H]

Synonym: VC0395_A2043

Alternate gene names: 147674099

Gene position: 2201698-2200748 (Counterclockwise)

Preceding gene: 147673480

Following gene: 147674010

Centisome position: 72.81

GC content: 50.16

Gene sequence:

>951_bases
ATGAAGAAACTTTTGATCAGTGCGCTGACACTGTTCTGTGTAAATTCAACTACCGCCTTTGCAGAGGCGTTGTTGTATCA
GATGAATGAAGCCAGCCAACATCTCAATTACGAACTCTCATACATCTTGGTTAAGAAAAACAGCATTGAGCCCTTGTTGT
ATCGTCATGCTCGGCAAGATGATCAACAACTGGCGCATTTGGTGTACTTGAGCGGCCCCGTGCGTGAAGTGATCCGCCGT
GGTGATGAAGTGAGTTACATCGAGCCGGGTGTCGAGCCTTTTACGATTGAATCGGGCAATATGGTGGCTCCAACCATCCC
CATGTTGCACACGGATGTGGCGGAGTTGAGCCGCTACTATGACTTCGTGAAAGTCGGGCGCGCCCGTGAAGCGGGGGCAG
CGTGCCAAGTACTGCGCGTGGTTCCGAAAGATGGTTTACGCTACTCGTATGTTGTCTGGGTCGATGAAAAAAGCCATTTG
CCTTTAAGGGCGGATTTGCTGGATCGCGATGGCGAAGTGCTTGAGCAGTATCGCACCATTTCATTTTCGGTCAGCGAGCG
TTTGGCCGAAATCATGGCAGGGCTAAACAAGGTGCAACTGCCTGAAGTCCTTAAGTTGCCAAAAGGCAGTGTGCAAGAGA
CCTTCTGGCAAGTCACTTGGGTTCCGGATGGTTTTCAAGCCATGGAGCTGAATCGTTATCGTATGGCAATGACAGAGCGT
TTGGTGGAAAGCCAGATGTATTCGGACGGCCTGTTTAATTTCTCAGTGTATGTCTCTGCCAGTGATAACTACTCACTCAA
AGGTCAGTTGGTTCGACAAGGCCGCCGTACTTTGCACAGTGTCGTCAAAGGTGAGAATGAAATTTCGGTAGTGGGCGATA
TTCCTCCTGCGACTGCGCAACGTATCGCTCAATCGGTGATGTTTGGTGTCGGTGGAGTGAAAGCGCAATGA

Upstream 100 bases:

>100_bases
GTCGCCGCGTAAACGCCTTGCTGCAGGACTACGAACTGCAATTACGCCTAAACAGTGAGAATAGTGCTTCTCACCAACAC
CCAGTTGAATCGGTTGTGGA

Downstream 100 bases:

>100_bases
TGACGGCATTGGCTACGGTGACCAAAGTGGTACCCGCTCAACAAGGATTTCAAGTGACGCTGAGTTGTGAACAGCAAACC
AGTTGCAGCAGTTGCCAATC

Product: periplasmic negative regulator of sigmaE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MKKLLISALTLFCVNSTTAFAEALLYQMNEASQHLNYELSYILVKKNSIEPLLYRHARQDDQQLAHLVYLSGPVREVIRR
GDEVSYIEPGVEPFTIESGNMVAPTIPMLHTDVAELSRYYDFVKVGRAREAGAACQVLRVVPKDGLRYSYVVWVDEKSHL
PLRADLLDRDGEVLEQYRTISFSVSERLAEIMAGLNKVQLPEVLKLPKGSVQETFWQVTWVPDGFQAMELNRYRMAMTER
LVESQMYSDGLFNFSVYVSASDNYSLKGQLVRQGRRTLHSVVKGENEISVVGDIPPATAQRIAQSVMFGVGGVKAQ

Sequences:

>Translated_316_residues
MKKLLISALTLFCVNSTTAFAEALLYQMNEASQHLNYELSYILVKKNSIEPLLYRHARQDDQQLAHLVYLSGPVREVIRR
GDEVSYIEPGVEPFTIESGNMVAPTIPMLHTDVAELSRYYDFVKVGRAREAGAACQVLRVVPKDGLRYSYVVWVDEKSHL
PLRADLLDRDGEVLEQYRTISFSVSERLAEIMAGLNKVQLPEVLKLPKGSVQETFWQVTWVPDGFQAMELNRYRMAMTER
LVESQMYSDGLFNFSVYVSASDNYSLKGQLVRQGRRTLHSVVKGENEISVVGDIPPATAQRIAQSVMFGVGGVKAQ
>Mature_316_residues
MKKLLISALTLFCVNSTTAFAEALLYQMNEASQHLNYELSYILVKKNSIEPLLYRHARQDDQQLAHLVYLSGPVREVIRR
GDEVSYIEPGVEPFTIESGNMVAPTIPMLHTDVAELSRYYDFVKVGRAREAGAACQVLRVVPKDGLRYSYVVWVDEKSHL
PLRADLLDRDGEVLEQYRTISFSVSERLAEIMAGLNKVQLPEVLKLPKGSVQETFWQVTWVPDGFQAMELNRYRMAMTER
LVESQMYSDGLFNFSVYVSASDNYSLKGQLVRQGRRTLHSVVKGENEISVVGDIPPATAQRIAQSVMFGVGGVKAQ

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3026

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseB family [H]

Homologues:

Organism=Escherichia coli, GI1788924, Length=319, Percent_Identity=47.0219435736677, Blast_Score=300, Evalue=6e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005588 [H]

Pfam domain/function: PF03888 MucB_RseB [H]

EC number: NA

Molecular weight: Translated: 35643; Mature: 35643

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLISALTLFCVNSTTAFAEALLYQMNEASQHLNYELSYILVKKNSIEPLLYRHARQD
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHCCCH
DQQLAHLVYLSGPVREVIRRGDEVSYIEPGVEPFTIESGNMVAPTIPMLHTDVAELSRYY
HHHHHHHHHCCCHHHHHHHCCCCCEEECCCCCEEEECCCCEECCCCCHHHHHHHHHHHHH
DFVKVGRAREAGAACQVLRVVPKDGLRYSYVVWVDEKSHLPLRADLLDRDGEVLEQYRTI
HHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEHHHHCCCHHHHHHHHHH
SFSVSERLAEIMAGLNKVQLPEVLKLPKGSVQETFWQVTWVPDGFQAMELNRYRMAMTER
HHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHEEEEEECCCCCHHHHHHHHHHHHHHH
LVESQMYSDGLFNFSVYVSASDNYSLKGQLVRQGRRTLHSVVKGENEISVVGDIPPATAQ
HHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH
RIAQSVMFGVGGVKAQ
HHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKKLLISALTLFCVNSTTAFAEALLYQMNEASQHLNYELSYILVKKNSIEPLLYRHARQD
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHCCCH
DQQLAHLVYLSGPVREVIRRGDEVSYIEPGVEPFTIESGNMVAPTIPMLHTDVAELSRYY
HHHHHHHHHCCCHHHHHHHCCCCCEEECCCCCEEEECCCCEECCCCCHHHHHHHHHHHHH
DFVKVGRAREAGAACQVLRVVPKDGLRYSYVVWVDEKSHLPLRADLLDRDGEVLEQYRTI
HHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCEEHHHHCCCHHHHHHHHHH
SFSVSERLAEIMAGLNKVQLPEVLKLPKGSVQETFWQVTWVPDGFQAMELNRYRMAMTER
HHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHEEEEEECCCCCHHHHHHHHHHHHHHH
LVESQMYSDGLFNFSVYVSASDNYSLKGQLVRQGRRTLHSVVKGENEISVVGDIPPATAQ
HHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH
RIAQSVMFGVGGVKAQ
HHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]