| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673998
Identifier: 147673998
GI number: 147673998
Start: 2347214
End: 2347987
Strand: Reverse
Name: 147673998
Synonym: VC0395_A2199
Alternate gene names: NA
Gene position: 2347987-2347214 (Counterclockwise)
Preceding gene: 147673103
Following gene: 147674583
Centisome position: 77.64
GC content: 48.19
Gene sequence:
>774_bases GTGTTAGCCATGAGATTCATGTTGCTGTTGATGCTAGTTGGGATGGCGCATGGAGCGCTAGCCAACCCCTTACGTGTCTG CGTTGGGGACGTTAATGTCTGGCCACCGTTTACCTATTGGCAAGGCAGCTCTGCACAAGAAAAGGCAGAATCATTGACGG GATCAGCCACGACCTTGGTGCTCGAAGCACTGAAAAAACAAGAGATCGAATACCAACTGCATTTCATGCCATGGGCTCGG GTTCAACAAGAATTGGCGCAAGCGACAGGTCGCTGTGACCTAACTTGGGATGCTAGCTATCGAGCCGAAAGGGCGGAATA CAGCTATTTCTCGGTACCGCTCTATACGATCCAGTTGGGCTATTTCACCTTGCCGGAAAACAGTAAGGATTTGAATCTGG CTACCGACAGCGATGTACTGTGTGGGGTCAATGGTTTTAACTACCAAAATTTCGCATTACCACGAGAGCCTTCACTGACA CTCAATTCTGTCCAGCAAGCCTTAAATATGCTGCAAAAAGAGCGTTGTGATTGGTTCGTGAGTGAAATTGAGCCAATTTA TGGCGGGATCATGTTAGGGCTCTATCAGTTAGATAGACCGATTCAGCATCACTTTTTAGGCAAAACCAAGGAGTACCATG TGCAGGTGCGGCGTAGCCTACCGAACGCGATGCCACTCTTAAATGGCCTTAATGAGTACATTTTACAAGCCCAATCCAGC GGACATGCGCAAGCGGTTTTTGATCGCTTCTTGTCGATAACGCAAACCGAATAA
Upstream 100 bases:
>100_bases TTTTTGCACGCGAGATAGGTTTGCACAGAGCGAAAGTGTGTGAGGAATTCTCCCATCTGCGTTTCACACGGCTACACTTA AAACACCGAAATTTAAAAGA
Downstream 100 bases:
>100_bases ATCGACGCCGTGGCCGTTATGGCTTCTTTCTCCTCCCAGAGCGGCTCATTCGCCGCTCTGACTATTTACCCCGCATGTTG AAACTTTGCGATGCATTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MLAMRFMLLLMLVGMAHGALANPLRVCVGDVNVWPPFTYWQGSSAQEKAESLTGSATTLVLEALKKQEIEYQLHFMPWAR VQQELAQATGRCDLTWDASYRAERAEYSYFSVPLYTIQLGYFTLPENSKDLNLATDSDVLCGVNGFNYQNFALPREPSLT LNSVQQALNMLQKERCDWFVSEIEPIYGGIMLGLYQLDRPIQHHFLGKTKEYHVQVRRSLPNAMPLLNGLNEYILQAQSS GHAQAVFDRFLSITQTE
Sequences:
>Translated_257_residues MLAMRFMLLLMLVGMAHGALANPLRVCVGDVNVWPPFTYWQGSSAQEKAESLTGSATTLVLEALKKQEIEYQLHFMPWAR VQQELAQATGRCDLTWDASYRAERAEYSYFSVPLYTIQLGYFTLPENSKDLNLATDSDVLCGVNGFNYQNFALPREPSLT LNSVQQALNMLQKERCDWFVSEIEPIYGGIMLGLYQLDRPIQHHFLGKTKEYHVQVRRSLPNAMPLLNGLNEYILQAQSS GHAQAVFDRFLSITQTE >Mature_257_residues MLAMRFMLLLMLVGMAHGALANPLRVCVGDVNVWPPFTYWQGSSAQEKAESLTGSATTLVLEALKKQEIEYQLHFMPWAR VQQELAQATGRCDLTWDASYRAERAEYSYFSVPLYTIQLGYFTLPENSKDLNLATDSDVLCGVNGFNYQNFALPREPSLT LNSVQQALNMLQKERCDWFVSEIEPIYGGIMLGLYQLDRPIQHHFLGKTKEYHVQVRRSLPNAMPLLNGLNEYILQAQSS GHAQAVFDRFLSITQTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29194; Mature: 29194
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAMRFMLLLMLVGMAHGALANPLRVCVGDVNVWPPFTYWQGSSAQEKAESLTGSATTLV CHHHHHHHHHHHHHHHCCHHCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHH LEALKKQEIEYQLHFMPWARVQQELAQATGRCDLTWDASYRAERAEYSYFSVPLYTIQLG HHHHHHHHHEEEEEECCHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEECEEEEEEEE YFTLPENSKDLNLATDSDVLCGVNGFNYQNFALPREPSLTLNSVQQALNMLQKERCDWFV EEECCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SEIEPIYGGIMLGLYQLDRPIQHHFLGKTKEYHVQVRRSLPNAMPLLNGLNEYILQAQSS HHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC GHAQAVFDRFLSITQTE CCHHHHHHHHHHHHCCC >Mature Secondary Structure MLAMRFMLLLMLVGMAHGALANPLRVCVGDVNVWPPFTYWQGSSAQEKAESLTGSATTLV CHHHHHHHHHHHHHHHCCHHCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHH LEALKKQEIEYQLHFMPWARVQQELAQATGRCDLTWDASYRAERAEYSYFSVPLYTIQLG HHHHHHHHHEEEEEECCHHHHHHHHHHHCCCCEEEECCCHHHHHCCCCEEECEEEEEEEE YFTLPENSKDLNLATDSDVLCGVNGFNYQNFALPREPSLTLNSVQQALNMLQKERCDWFV EEECCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SEIEPIYGGIMLGLYQLDRPIQHHFLGKTKEYHVQVRRSLPNAMPLLNGLNEYILQAQSS HHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC GHAQAVFDRFLSITQTE CCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA