| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is bisZ [H]
Identifier: 147673939
GI number: 147673939
Start: 1653442
End: 1655889
Strand: Reverse
Name: bisZ [H]
Synonym: VC0395_A1538
Alternate gene names: 147673939
Gene position: 1655889-1653442 (Counterclockwise)
Preceding gene: 147673410
Following gene: 147675040
Centisome position: 54.76
GC content: 52.33
Gene sequence:
>2448_bases ATGACTAAAATCACCCGCCGTGGATTTTTAAAAGGCACTGGTATGGCTGCCGGTGCAATGGCTTTCACTTCATTTTCACC ACTCTCGATTGCCAGTGATAACGCACGTGGTAAAGGCGTGTTAACGGCTGGACGTATGGGGCCACTTCTCTGTGAAGTGC AAGATGGCAAAATGGTGGCGACCAAAAATGCGCTGGCGCAAACTGTACCGAACAGCTTGCAATCGACAGGCCCCGATCAG GTGTATACCCAAGCGCGGGTTAAATACCCTATGGTTCGTAAAGGCTTTTTAGCGAACCCTGCCGCACCGAAAGGAGTGCG TGGCAGTGATGAGTTTGTGCGCGTATCGTGGGATGACGCGTATCGCTTAATCCATGAGCAGCATATGCGCATTCGCAAAA CCTATGGTCCAGCTTCGGTGTTTGCTGGCTCTTATGGTTGGCGCTCCAGTGGCGTGCTGCATAAAGCTCAAACTTTATTG CAACGCTATATGAGTATGGCGGGCGGCTATTCAGGCCACTTGGGAGATTACTCAACCGGCGCGGCGCAAATCATCATGCC GCACGTGGTTGGTTCGATTGAAGTGTATGAGCAGCAAACCACTTACCCCGTAGTGCTAGAGCACAGTGATGTGGTGGTTC TGTGGGGGTTAAACCCGATCAACACATTGAAAATTGCGTGGAGCTCGACCGACTGTGCAGGCCTTGAATTCTTCCATCAA CTGAAAAAATCCGGCAAAACCATTATCGGCATTGACCCGATCCGCTCTGAAACCATCGAGTTTTTCGGTGAGCAAGCCCA ATGGATTGCCCCACACCCAATGACAGATGTGGCGATGATGATGGGCATCGCGCACTCGCTGATCAAGCAAGGTAAGCACG ATAAAGCCTTCTTGGACAAATACACCGTAGGCTACGATCGCTTTGAAGCGTATTTGCTGGGTAAAGAAGATGGCGTTGAA AAGTCCGCGCAATGGGCAGAAGGCATTTGTGGCGTACCAGCCAAGCAACTAGAAACGCTGGCTGAGATTTTCAGCAACCA TCGCACTATGCTAATGGCAGGCTGGGGTATGCAGCGTCAACAATATGGTGAGCAGCGTCACTGGATGGTGGTCACCTTAG CCGCGATGTTGGGGCAAATTGGCTTGCCGGGCGGTGGTTTTGGTTTCTCCTACCATTACTCGAATGGCGGGAACCCAGCG CGTGACGCGGGAGTTCTGCCTGCCATTTCGGCAGCTATTGGTGGTGGCTCTTCGGCGGGGAATGATTGGGCGATTTCAGG GGCGACGCAAAGTTTCCCGGTCGCGCGTATTGTGGAAGCGTTGGAGAATCCGGGCGGGGCCTATCAACACAATGGTCACA CGCTGACCTTCCCTGAAATCAAGATGATCTGGTGGGCGGGTGGTGCCAACTTTACCCACCATCAAGACACCAATCGTCTG ATCAAAGCGTGGCAAAAGCCTGAGCTGATTGTAATTTCAGAGCCGTATTGGACAGCGGCGGCGAAGCATGCCGATATCGT ACTGCCGATCACCACAACGTTTGAGCGTAATGACTTGACCATGACGGGTGACTACAGTAACCAACACTTGGTGCCGATGA AACAGGTGGTGGAGCCACAAGGCGAAGCGCGTAACGACTTTGATGTGTTTGCCGATATGGCGGAAATGATCCGTCCCGGA GGCCGTGATGTGTTTACCGAAGGCAAAACCGAGATGGAATGGTTGTACGGTTTCTACAAAACCGCGCAGAAGAGCGGCCG TGCAGCACGAGTGGCGATGCCGAATTTCAGTAAGTTCTGGGAAGATAACCAGCTGATTGAAATGAAGTGGAACGCGAAAA ATGCTCAGTTTGTGCGTTACGCCGATTTTCGCGCGGATCCGATCCTCAATCCATTAGGTACACCGAGCGGCAAGATTGAG ATTTACTCTAAAACTCTGGCGGGCTTTAATTTGCCTGATTGTCCAGCCCATCCAACCTGGTTGGCTCCTGATGAATTTAC AGGTAATGCGAAGCAGGGCGAGTTGCAATTAATGACGGCGCACGCGGCGCACCGTTTGCACAGTCAATTCAACTACGCTC AATTGCGGGAAGAGTATGCGATTGCTAACCGTGAGCCGATCTGGATCCACCCAGAAGATGCGGCATCACGCGGCATTCAA ACGGGCGATTTGGTTCGTGCCTATAACCAGCGTGGCCAAGTACTGGTCGGCGCTTTGGTGACGGATCGCATCAAACAAGG CTCAGTCTGTATTCACGAAGGCGGCTGGCCAGATCTTGATCCGCAAACCGGCTTATGTAAAAACGGTGGTGCGAATGTGC TGACTTCAGACATTCCGACTTCACGTTTGGCGAATGGCTGTGCGGCGAACTCTTCTCTGGTGCGTATTGAAAAGTACACA GGGCCAGCGTTGGAACTGACGGCGTTTATGCCACCGAAAAATGGCTAA
Upstream 100 bases:
>100_bases ACGGATATTTCCGCTGAGAATCTGGAGATTCTCACCAAGTTCTTCCAGCACCATGCCAAAGATATGGTTAGCCACTGAGT ATAAGTAGAGGGATAACGTT
Downstream 100 bases:
>100_bases TCGCGAGTGATAAGAAAACACTAATAGAAAGCCGAGGCGAGTGCCTCGGCTTTTTGCGTTCTTAACCGACTTGCTGCTTT GGCTGAAGCCTAAGCCGAGG
Product: biotin sulfoxide reductase
Products: NA
Alternate protein names: TMAO reductase 2; Trimethylamine oxidase 2 [H]
Number of amino acids: Translated: 815; Mature: 814
Protein sequence:
>815_residues MTKITRRGFLKGTGMAAGAMAFTSFSPLSIASDNARGKGVLTAGRMGPLLCEVQDGKMVATKNALAQTVPNSLQSTGPDQ VYTQARVKYPMVRKGFLANPAAPKGVRGSDEFVRVSWDDAYRLIHEQHMRIRKTYGPASVFAGSYGWRSSGVLHKAQTLL QRYMSMAGGYSGHLGDYSTGAAQIIMPHVVGSIEVYEQQTTYPVVLEHSDVVVLWGLNPINTLKIAWSSTDCAGLEFFHQ LKKSGKTIIGIDPIRSETIEFFGEQAQWIAPHPMTDVAMMMGIAHSLIKQGKHDKAFLDKYTVGYDRFEAYLLGKEDGVE KSAQWAEGICGVPAKQLETLAEIFSNHRTMLMAGWGMQRQQYGEQRHWMVVTLAAMLGQIGLPGGGFGFSYHYSNGGNPA RDAGVLPAISAAIGGGSSAGNDWAISGATQSFPVARIVEALENPGGAYQHNGHTLTFPEIKMIWWAGGANFTHHQDTNRL IKAWQKPELIVISEPYWTAAAKHADIVLPITTTFERNDLTMTGDYSNQHLVPMKQVVEPQGEARNDFDVFADMAEMIRPG GRDVFTEGKTEMEWLYGFYKTAQKSGRAARVAMPNFSKFWEDNQLIEMKWNAKNAQFVRYADFRADPILNPLGTPSGKIE IYSKTLAGFNLPDCPAHPTWLAPDEFTGNAKQGELQLMTAHAAHRLHSQFNYAQLREEYAIANREPIWIHPEDAASRGIQ TGDLVRAYNQRGQVLVGALVTDRIKQGSVCIHEGGWPDLDPQTGLCKNGGANVLTSDIPTSRLANGCAANSSLVRIEKYT GPALELTAFMPPKNG
Sequences:
>Translated_815_residues MTKITRRGFLKGTGMAAGAMAFTSFSPLSIASDNARGKGVLTAGRMGPLLCEVQDGKMVATKNALAQTVPNSLQSTGPDQ VYTQARVKYPMVRKGFLANPAAPKGVRGSDEFVRVSWDDAYRLIHEQHMRIRKTYGPASVFAGSYGWRSSGVLHKAQTLL QRYMSMAGGYSGHLGDYSTGAAQIIMPHVVGSIEVYEQQTTYPVVLEHSDVVVLWGLNPINTLKIAWSSTDCAGLEFFHQ LKKSGKTIIGIDPIRSETIEFFGEQAQWIAPHPMTDVAMMMGIAHSLIKQGKHDKAFLDKYTVGYDRFEAYLLGKEDGVE KSAQWAEGICGVPAKQLETLAEIFSNHRTMLMAGWGMQRQQYGEQRHWMVVTLAAMLGQIGLPGGGFGFSYHYSNGGNPA RDAGVLPAISAAIGGGSSAGNDWAISGATQSFPVARIVEALENPGGAYQHNGHTLTFPEIKMIWWAGGANFTHHQDTNRL IKAWQKPELIVISEPYWTAAAKHADIVLPITTTFERNDLTMTGDYSNQHLVPMKQVVEPQGEARNDFDVFADMAEMIRPG GRDVFTEGKTEMEWLYGFYKTAQKSGRAARVAMPNFSKFWEDNQLIEMKWNAKNAQFVRYADFRADPILNPLGTPSGKIE IYSKTLAGFNLPDCPAHPTWLAPDEFTGNAKQGELQLMTAHAAHRLHSQFNYAQLREEYAIANREPIWIHPEDAASRGIQ TGDLVRAYNQRGQVLVGALVTDRIKQGSVCIHEGGWPDLDPQTGLCKNGGANVLTSDIPTSRLANGCAANSSLVRIEKYT GPALELTAFMPPKNG >Mature_814_residues TKITRRGFLKGTGMAAGAMAFTSFSPLSIASDNARGKGVLTAGRMGPLLCEVQDGKMVATKNALAQTVPNSLQSTGPDQV YTQARVKYPMVRKGFLANPAAPKGVRGSDEFVRVSWDDAYRLIHEQHMRIRKTYGPASVFAGSYGWRSSGVLHKAQTLLQ RYMSMAGGYSGHLGDYSTGAAQIIMPHVVGSIEVYEQQTTYPVVLEHSDVVVLWGLNPINTLKIAWSSTDCAGLEFFHQL KKSGKTIIGIDPIRSETIEFFGEQAQWIAPHPMTDVAMMMGIAHSLIKQGKHDKAFLDKYTVGYDRFEAYLLGKEDGVEK SAQWAEGICGVPAKQLETLAEIFSNHRTMLMAGWGMQRQQYGEQRHWMVVTLAAMLGQIGLPGGGFGFSYHYSNGGNPAR DAGVLPAISAAIGGGSSAGNDWAISGATQSFPVARIVEALENPGGAYQHNGHTLTFPEIKMIWWAGGANFTHHQDTNRLI KAWQKPELIVISEPYWTAAAKHADIVLPITTTFERNDLTMTGDYSNQHLVPMKQVVEPQGEARNDFDVFADMAEMIRPGG RDVFTEGKTEMEWLYGFYKTAQKSGRAARVAMPNFSKFWEDNQLIEMKWNAKNAQFVRYADFRADPILNPLGTPSGKIEI YSKTLAGFNLPDCPAHPTWLAPDEFTGNAKQGELQLMTAHAAHRLHSQFNYAQLREEYAIANREPIWIHPEDAASRGIQT GDLVRAYNQRGQVLVGALVTDRIKQGSVCIHEGGWPDLDPQTGLCKNGGANVLTSDIPTSRLANGCAANSSLVRIEKYTG PALELTAFMPPKNG
Specific function: Reduces trimethylamine-N-oxide (TMAO) into trimethylamine; an anaerobic reaction coupled to energy-yielding reactions. Can also reduce other N- and S-oxide compounds such as 4-methylmorpholine-N-oxide and biotin sulfoxide (BSO), but with a lower catalytic
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI87081994, Length=809, Percent_Identity=69.5920889987639, Blast_Score=1188, Evalue=0.0, Organism=Escherichia coli, GI145693196, Length=774, Percent_Identity=63.4366925064599, Blast_Score=1060, Evalue=0.0, Organism=Escherichia coli, GI1787231, Length=790, Percent_Identity=42.6582278481013, Blast_Score=622, Evalue=1e-179, Organism=Escherichia coli, GI87081797, Length=858, Percent_Identity=31.8181818181818, Blast_Score=316, Evalue=3e-87, Organism=Escherichia coli, GI1787870, Length=860, Percent_Identity=29.8837209302326, Blast_Score=278, Evalue=7e-76, Organism=Escherichia coli, GI171474008, Length=851, Percent_Identity=28.9071680376028, Blast_Score=256, Evalue=6e-69, Organism=Escherichia coli, GI3868721, Length=717, Percent_Identity=21.8967921896792, Blast_Score=97, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006658 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006655 - InterPro: IPR006311 [H]
Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.7.2.3 [H]
Molecular weight: Translated: 89441; Mature: 89309
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: PS00490 MOLYBDOPTERIN_PROK_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKITRRGFLKGTGMAAGAMAFTSFSPLSIASDNARGKGVLTAGRMGPLLCEVQDGKMVA CCCCCCCCCCCCCCCCHHHHHHCCCCCCEEECCCCCCCEEEEECCCCCEEEEECCCCEEE TKNALAQTVPNSLQSTGPDQVYTQARVKYPMVRKGFLANPAAPKGVRGSDEFVRVSWDDA EHHHHHHHCCHHHHCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEHHHH YRLIHEQHMRIRKTYGPASVFAGSYGWRSSGVLHKAQTLLQRYMSMAGGYSGHLGDYSTG HHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC AAQIIMPHVVGSIEVYEQQTTYPVVLEHSDVVVLWGLNPINTLKIAWSSTDCAGLEFFHQ HHHEEHHHHHCCEEEEECCCCCEEEEECCCEEEEECCCCCCEEEEEECCCCCHHHHHHHH LKKSGKTIIGIDPIRSETIEFFGEQAQWIAPHPMTDVAMMMGIAHSLIKQGKHDKAFLDK HHHCCCEEEEECCCHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH YTVGYDRFEAYLLGKEDGVEKSAQWAEGICGVPAKQLETLAEIFSNHRTMLMAGWGMQRQ HHCCHHHEEEEEECCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHH QYGEQRHWMVVTLAAMLGQIGLPGGGFGFSYHYSNGGNPARDAGVLPAISAAIGGGSSAG HHCCCCCCHHEEHHHHHHCCCCCCCCCCEEEEECCCCCCCHHCCCCHHHHHHHCCCCCCC NDWAISGATQSFPVARIVEALENPGGAYQHNGHTLTFPEIKMIWWAGGANFTHHQDTNRL CCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCHHHHH IKAWQKPELIVISEPYWTAAAKHADIVLPITTTFERNDLTMTGDYSNQHLVPMKQVVEPQ HHHCCCCCEEEEECCCHHHHCCCCEEEEEEEEEEECCCEEEECCCCCCCCCCHHHHHCCC GEARNDFDVFADMAEMIRPGGRDVFTEGKTEMEWLYGFYKTAQKSGRAARVAMPNFSKFW CCCCCHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHC EDNQLIEMKWNAKNAQFVRYADFRADPILNPLGTPSGKIEIYSKTLAGFNLPDCPAHPTW CCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCC LAPDEFTGNAKQGELQLMTAHAAHRLHSQFNYAQLREEYAIANREPIWIHPEDAASRGIQ CCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCHHHHCCCC TGDLVRAYNQRGQVLVGALVTDRIKQGSVCIHEGGWPDLDPQTGLCKNGGANVLTSDIPT CHHHHHHHCCCCCEEEEEHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCCH SRLANGCAANSSLVRIEKYTGPALELTAFMPPKNG HHHHCCCCCCCCEEEEEECCCCEEEEEEECCCCCC >Mature Secondary Structure TKITRRGFLKGTGMAAGAMAFTSFSPLSIASDNARGKGVLTAGRMGPLLCEVQDGKMVA CCCCCCCCCCCCCCCHHHHHHCCCCCCEEECCCCCCCEEEEECCCCCEEEEECCCCEEE TKNALAQTVPNSLQSTGPDQVYTQARVKYPMVRKGFLANPAAPKGVRGSDEFVRVSWDDA EHHHHHHHCCHHHHCCCCHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEHHHH YRLIHEQHMRIRKTYGPASVFAGSYGWRSSGVLHKAQTLLQRYMSMAGGYSGHLGDYSTG HHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC AAQIIMPHVVGSIEVYEQQTTYPVVLEHSDVVVLWGLNPINTLKIAWSSTDCAGLEFFHQ HHHEEHHHHHCCEEEEECCCCCEEEEECCCEEEEECCCCCCEEEEEECCCCCHHHHHHHH LKKSGKTIIGIDPIRSETIEFFGEQAQWIAPHPMTDVAMMMGIAHSLIKQGKHDKAFLDK HHHCCCEEEEECCCHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH YTVGYDRFEAYLLGKEDGVEKSAQWAEGICGVPAKQLETLAEIFSNHRTMLMAGWGMQRQ HHCCHHHEEEEEECCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHH QYGEQRHWMVVTLAAMLGQIGLPGGGFGFSYHYSNGGNPARDAGVLPAISAAIGGGSSAG HHCCCCCCHHEEHHHHHHCCCCCCCCCCEEEEECCCCCCCHHCCCCHHHHHHHCCCCCCC NDWAISGATQSFPVARIVEALENPGGAYQHNGHTLTFPEIKMIWWAGGANFTHHQDTNRL CCEEECCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCHHHHH IKAWQKPELIVISEPYWTAAAKHADIVLPITTTFERNDLTMTGDYSNQHLVPMKQVVEPQ HHHCCCCCEEEEECCCHHHHCCCCEEEEEEEEEEECCCEEEECCCCCCCCCCHHHHHCCC GEARNDFDVFADMAEMIRPGGRDVFTEGKTEMEWLYGFYKTAQKSGRAARVAMPNFSKFW CCCCCHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCCHHHHC EDNQLIEMKWNAKNAQFVRYADFRADPILNPLGTPSGKIEIYSKTLAGFNLPDCPAHPTW CCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCC LAPDEFTGNAKQGELQLMTAHAAHRLHSQFNYAQLREEYAIANREPIWIHPEDAASRGIQ CCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCHHHHCCCC TGDLVRAYNQRGQVLVGALVTDRIKQGSVCIHEGGWPDLDPQTGLCKNGGANVLTSDIPT CHHHHHHHCCCCCEEEEEHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCCH SRLANGCAANSSLVRIEKYTGPALELTAFMPPKNG HHHHCCCCCCCCEEEEEECCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]