| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673890
Identifier: 147673890
GI number: 147673890
Start: 2573806
End: 2574216
Strand: Reverse
Name: 147673890
Synonym: VC0395_A2419
Alternate gene names: NA
Gene position: 2574216-2573806 (Counterclockwise)
Preceding gene: 147675490
Following gene: 147673839
Centisome position: 85.12
GC content: 45.74
Gene sequence:
>411_bases ATGCTAAAACGTTACGTCGTCCAAATAATGCTCGCTTTGAGCTTCATTGTTCCTTTCCATAGCCATGCGGAAGAGAAATC TGCTGTACCTCAGTTGGCTTATTTCACTTTAGAACCTGATCTCACCACCAATTTTTTTACCAAAGGTAACAAATTGGGTT ATATCCAAGTACGGATCGATATTATGGTCGCCAATGCTGCAGATCTCCCCGTTGTGGAGCAGCATCAACCTTTGATTCGT GATGCCGTGGTTGAGCTGCTCGGTAAGCAAACCGAAGACACCATCAAATCCTTAGCGGGCCGTGAGGATTTGCGTAAGTC GCTTGTCAATCGCCTCAACAACATCCTGTTGCCAGAGGTAGGGCGTACTGTGATCGCGGATCTGCTGTTTACGAAATACA TCTACCAATAA
Upstream 100 bases:
>100_bases TTCGAACGCGGAAAGCATTTTATTTACCAAATGGATGCTCTATTGTAACAAGACTCCGGCGGTTCGAGTATTGCGAACAG AATAAAGAGCAGACAGAAAT
Downstream 100 bases:
>100_bases TCGGATTGTGTTGGGTGCATCGCTCAGCGACGAGTCAGTAAACAAAAAAGCGGCGGTTGCCGCTTTTTTACTCTCAGAGT ATCGATGTCTGCTGCATCAT
Product: flagellar basal body-associated protein FliL-like protein
Products: NA
Alternate protein names: Flagellar Basal Body-Associated Protein FliL; Flagellar Protein FliL; Flagellar Biosynthesis Protein FliL
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MLKRYVVQIMLALSFIVPFHSHAEEKSAVPQLAYFTLEPDLTTNFFTKGNKLGYIQVRIDIMVANAADLPVVEQHQPLIR DAVVELLGKQTEDTIKSLAGREDLRKSLVNRLNNILLPEVGRTVIADLLFTKYIYQ
Sequences:
>Translated_136_residues MLKRYVVQIMLALSFIVPFHSHAEEKSAVPQLAYFTLEPDLTTNFFTKGNKLGYIQVRIDIMVANAADLPVVEQHQPLIR DAVVELLGKQTEDTIKSLAGREDLRKSLVNRLNNILLPEVGRTVIADLLFTKYIYQ >Mature_136_residues MLKRYVVQIMLALSFIVPFHSHAEEKSAVPQLAYFTLEPDLTTNFFTKGNKLGYIQVRIDIMVANAADLPVVEQHQPLIR DAVVELLGKQTEDTIKSLAGREDLRKSLVNRLNNILLPEVGRTVIADLLFTKYIYQ
Specific function: Unknown
COG id: COG1580
COG function: function code N; Flagellar basal body-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15454; Mature: 15454
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKRYVVQIMLALSFIVPFHSHAEEKSAVPQLAYFTLEPDLTTNFFTKGNKLGYIQVRID CHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHEEEEECCCCCCHHCCCCCCEEEEEEEEE IMVANAADLPVVEQHQPLIRDAVVELLGKQTEDTIKSLAGREDLRKSLVNRLNNILLPEV EEEECCCCCCCCHHCCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCHH GRTVIADLLFTKYIYQ HHHHHHHHHHHHHHCC >Mature Secondary Structure MLKRYVVQIMLALSFIVPFHSHAEEKSAVPQLAYFTLEPDLTTNFFTKGNKLGYIQVRID CHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHEEEEECCCCCCHHCCCCCCEEEEEEEEE IMVANAADLPVVEQHQPLIRDAVVELLGKQTEDTIKSLAGREDLRKSLVNRLNNILLPEV EEEECCCCCCCCHHCCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCHH GRTVIADLLFTKYIYQ HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA