| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673884
Identifier: 147673884
GI number: 147673884
Start: 1184357
End: 1185022
Strand: Reverse
Name: 147673884
Synonym: VC0395_A1124
Alternate gene names: NA
Gene position: 1185022-1184357 (Counterclockwise)
Preceding gene: 147673044
Following gene: 147673441
Centisome position: 39.19
GC content: 48.65
Gene sequence:
>666_bases TTGGTCGTCACGGTGAGCTACTGGAAATTCGCCGCAAGAAACGTGAAGGCGCGGGGAGGTCTTGTGGCAACTGAAAACAG GTTTTTCTCTCGTTGGTCACAACGTAAATTAACCGCAGAATCAGACCAACTGCTTGATACCCAAAAGAGTTTTGACTCTC AGCCTGTGCAAGAGGAGCCGATAGAAAGTGAGTCCGCTGTAGAAACGGAAAGTGGGTTGGAGAGCCACTCGCTCGAACAA CCTCATTCAGCAGAGAATGAAGAACCCAGCGTAGCGAGTTTGTTGGTATCCGATGCGTCGCAAGAACTGAAGAAAGCGGC ATTGCGTAAGCTGTTTTTAAGCGGCGAGTTTAGCGAAGTGTGTATGCTGGATGATTACAACGCGGATTACAGCAACACAG CAACCCTCACCACGCAAGTCGCACAAACCTTACGCCAATGGTGTAATGAGCTAGAAACGACGCCAGAGGTTAAGTCTGAA CAGGCTATACCGGAAAAAGCCATGTCTGACCAAACTATGACTGATTTAAGCATGCCTGATGAAACGACAGCTTCTGCGCC CGAATTCGCTGAGGATTCTGCGCGGCTTTCTGATCACAATACGCTTTCTTCTTGCGATACTGCGGCATCTGACACACTGA ACAGTGAGACAAAATATACCGTATAG
Upstream 100 bases:
>100_bases ACCGCATCGCAAGCCGTCGCCAGCCGCTATATGGACAGCGATTATCTGGTGCTGTCGGCCGATATGCCGCTACCCGTTCA GGCGTGGATGGAAGCCTATA
Downstream 100 bases:
>100_bases AGATTAGGGACATTTTGACTTACTCCTCAATAGGTAGAGTGAGACATAATGTCTCACTCTTATTGTGGCTTTTCATTTCT CATCCCAGTTATCGATAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MVVTVSYWKFAARNVKARGGLVATENRFFSRWSQRKLTAESDQLLDTQKSFDSQPVQEEPIESESAVETESGLESHSLEQ PHSAENEEPSVASLLVSDASQELKKAALRKLFLSGEFSEVCMLDDYNADYSNTATLTTQVAQTLRQWCNELETTPEVKSE QAIPEKAMSDQTMTDLSMPDETTASAPEFAEDSARLSDHNTLSSCDTAASDTLNSETKYTV
Sequences:
>Translated_221_residues MVVTVSYWKFAARNVKARGGLVATENRFFSRWSQRKLTAESDQLLDTQKSFDSQPVQEEPIESESAVETESGLESHSLEQ PHSAENEEPSVASLLVSDASQELKKAALRKLFLSGEFSEVCMLDDYNADYSNTATLTTQVAQTLRQWCNELETTPEVKSE QAIPEKAMSDQTMTDLSMPDETTASAPEFAEDSARLSDHNTLSSCDTAASDTLNSETKYTV >Mature_221_residues MVVTVSYWKFAARNVKARGGLVATENRFFSRWSQRKLTAESDQLLDTQKSFDSQPVQEEPIESESAVETESGLESHSLEQ PHSAENEEPSVASLLVSDASQELKKAALRKLFLSGEFSEVCMLDDYNADYSNTATLTTQVAQTLRQWCNELETTPEVKSE QAIPEKAMSDQTMTDLSMPDETTASAPEFAEDSARLSDHNTLSSCDTAASDTLNSETKYTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24453; Mature: 24453
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVTVSYWKFAARNVKARGGLVATENRFFSRWSQRKLTAESDQLLDTQKSFDSQPVQEEP CEEEEHHHHHHHHCHHCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC IESESAVETESGLESHSLEQPHSAENEEPSVASLLVSDASQELKKAALRKLFLSGEFSEV CCCHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE CMLDDYNADYSNTATLTTQVAQTLRQWCNELETTPEVKSEQAIPEKAMSDQTMTDLSMPD EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHCCCHHHHCCCCC ETTASAPEFAEDSARLSDHNTLSSCDTAASDTLNSETKYTV CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MVVTVSYWKFAARNVKARGGLVATENRFFSRWSQRKLTAESDQLLDTQKSFDSQPVQEEP CEEEEHHHHHHHHCHHCCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC IESESAVETESGLESHSLEQPHSAENEEPSVASLLVSDASQELKKAALRKLFLSGEFSEV CCCHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE CMLDDYNADYSNTATLTTQVAQTLRQWCNELETTPEVKSEQAIPEKAMSDQTMTDLSMPD EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHCCCHHHHCCCCC ETTASAPEFAEDSARLSDHNTLSSCDTAASDTLNSETKYTV CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA