| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673044
Identifier: 147673044
GI number: 147673044
Start: 1184949
End: 1185425
Strand: Reverse
Name: 147673044
Synonym: VC0395_A1125
Alternate gene names: NA
Gene position: 1185425-1184949 (Counterclockwise)
Preceding gene: 147674653
Following gene: 147673884
Centisome position: 39.2
GC content: 53.46
Gene sequence:
>477_bases ATGACTGAACAAACTTCTCCTGAATCCTTAACGGATGGTGCTCATAGTAAAACCGACAGCGCTTGGCCGCTCGCTTGCAA CCTTGAGCCGCGTTTGGTCTCACGTGGCCGTTGGCAAACCACGCAGTGGATGTTGCACGGTTTCAGTTTAACGCCAGAGG CGCAGAGTCAATATGTCGCAACCTTGCACTTGTATCGTGACGAGCGTACTGACTATCGCTTTAACCTCAGTTCACAAGCG CCAAAGCTGTTCTTGGTTGCCGAAGATCCGATTGAAGATCAGCCGCTTAAAGTCGTGCAATTGACCGCATCGCAAGCCGT CGCCAGCCGCTATATGGACAGCGATTATCTGGTGCTGTCGGCCGATATGCCGCTACCCGTTCAGGCGTGGATGGAAGCCT ATATTGGTCGTCACGGTGAGCTACTGGAAATTCGCCGCAAGAAACGTGAAGGCGCGGGGAGGTCTTGTGGCAACTGA
Upstream 100 bases:
>100_bases CACAAAAGTGATGATGTTGCTCTACTTAAAGCAAGGTACTGGTACCCATGGCGCAATTATTGCTTTAATTTCAACTCTGA TTGTTAATTTAGTATGAGTT
Downstream 100 bases:
>100_bases AAACAGGTTTTTCTCTCGTTGGTCACAACGTAAATTAACCGCAGAATCAGACCAACTGCTTGATACCCAAAAGAGTTTTG ACTCTCAGCCTGTGCAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTEQTSPESLTDGAHSKTDSAWPLACNLEPRLVSRGRWQTTQWMLHGFSLTPEAQSQYVATLHLYRDERTDYRFNLSSQA PKLFLVAEDPIEDQPLKVVQLTASQAVASRYMDSDYLVLSADMPLPVQAWMEAYIGRHGELLEIRRKKREGAGRSCGN
Sequences:
>Translated_158_residues MTEQTSPESLTDGAHSKTDSAWPLACNLEPRLVSRGRWQTTQWMLHGFSLTPEAQSQYVATLHLYRDERTDYRFNLSSQA PKLFLVAEDPIEDQPLKVVQLTASQAVASRYMDSDYLVLSADMPLPVQAWMEAYIGRHGELLEIRRKKREGAGRSCGN >Mature_157_residues TEQTSPESLTDGAHSKTDSAWPLACNLEPRLVSRGRWQTTQWMLHGFSLTPEAQSQYVATLHLYRDERTDYRFNLSSQAP KLFLVAEDPIEDQPLKVVQLTASQAVASRYMDSDYLVLSADMPLPVQAWMEAYIGRHGELLEIRRKKREGAGRSCGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17914; Mature: 17783
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQTSPESLTDGAHSKTDSAWPLACNLEPRLVSRGRWQTTQWMLHGFSLTPEAQSQYVA CCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCCHHHEEECCCCCCCCCHHEEE TLHLYRDERTDYRFNLSSQAPKLFLVAEDPIEDQPLKVVQLTASQAVASRYMDSDYLVLS EEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEEHHHHHHHHHHCCCCEEEEE ADMPLPVQAWMEAYIGRHGELLEIRRKKREGAGRSCGN CCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TEQTSPESLTDGAHSKTDSAWPLACNLEPRLVSRGRWQTTQWMLHGFSLTPEAQSQYVA CCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHCCCCCCCHHHEEECCCCCCCCCHHEEE TLHLYRDERTDYRFNLSSQAPKLFLVAEDPIEDQPLKVVQLTASQAVASRYMDSDYLVLS EEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCEEEEEEHHHHHHHHHHCCCCEEEEE ADMPLPVQAWMEAYIGRHGELLEIRRKKREGAGRSCGN CCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA