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The map label for this gene is rdgC [H]

Identifier: 147673880

GI number: 147673880

Start: 261826

End: 262740

Strand: Reverse

Name: rdgC [H]

Synonym: VC0395_A0252

Alternate gene names: 147673880

Gene position: 262740-261826 (Counterclockwise)

Preceding gene: 147673098

Following gene: 147674148

Centisome position: 8.69

GC content: 49.62

Gene sequence:

>915_bases
ATGTGGTTTAAAAACTGTATGGTGTATCGCGTTAATCGCGAGGTTAACTTCAATGCCGATCAGCTGGAAAAACAGCTGGC
CGAATTTCGTTTTACGCCTTGCGGCAGTCAAGATAAACAGAAGTTTGGCTGGGTTTCCGCACTGGGTAAACACGGCGACA
TGATGACCCACGTCAGTGAAAACCGCATTTTAGTCTGCGCGAAACGTGAAGAAAAAATGCTCCCCGCTTCGGTGATCAAA
GATTCGCTCAATGCCAAAGTCGAAGCGATGGAAGCCGAAGAAGGCCGCCCACTGAAGAAAAAAGAAAAAGACGCGCTGAA
AGAAGACATCGTCATCGATTTACTGCCACGCGCCTTCAGCAAAAGCCAACTCACGTTTGTGCTGATCATGCCAACCGAAG
GCTTAATTCTAGTCGATGCAGGCAGCTACAAAAAAGCCGAAGATGTGCTCTCGCTACTGCGTAAAACCATGGGTAGTCTA
CCGGTGGTGCCTGCTATTCCTGAAATAGCGGTCGAAACGACGCTGACGCAATGGGTGAAAGATGGCAATCTGCCCCAAGG
CTTTAGCCTGATGGAAGAAGCGGAGCTCAAATCGTTACTCGATGATGGAGCCACCATTCGCTGCAAAAAACAAGAGCTGA
GCAGCGATGAAATCCTGAGCCACATTCAAGCCAATAAAGTGGTCACCAAGCTGGCGATCAACTGGCAAGACCGAATTCGT
TTTGTCCTCGCGGAAGATTGCAGCATCAAGCGCCTAGCGTACAGCGATGAACTTAAAGAGCAGAATGATGACATCCCACA
CGAAGATCGCGCAGCCCGTCTTGATGCCGATTTCTCCCTGTTGTGCGGAGAAATGTCGGTTTTCCTGCCGGATCTATTCA
ATGCATTAGGTGGCCTGCCTCACCCTGAAGCCTAA

Upstream 100 bases:

>100_bases
GTAACAACTGGAAGATGTGCCTCTTTTTTTGCATTCGGGGTAAGACATTCTCAGCATCTTCCCCTATCATGTCTGGCTTT
CTAACCAAGGGAAAACAACA

Downstream 100 bases:

>100_bases
TCGTGGACTCAATTTCACCACCTCGGCGTAAATGAGGTGGTGAGAGTTTCACTATGCAGAGTAGGGTTTTTGACGTAAAA
TTTGCGCCCTTTCCAATACC

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MWFKNCMVYRVNREVNFNADQLEKQLAEFRFTPCGSQDKQKFGWVSALGKHGDMMTHVSENRILVCAKREEKMLPASVIK
DSLNAKVEAMEAEEGRPLKKKEKDALKEDIVIDLLPRAFSKSQLTFVLIMPTEGLILVDAGSYKKAEDVLSLLRKTMGSL
PVVPAIPEIAVETTLTQWVKDGNLPQGFSLMEEAELKSLLDDGATIRCKKQELSSDEILSHIQANKVVTKLAINWQDRIR
FVLAEDCSIKRLAYSDELKEQNDDIPHEDRAARLDADFSLLCGEMSVFLPDLFNALGGLPHPEA

Sequences:

>Translated_304_residues
MWFKNCMVYRVNREVNFNADQLEKQLAEFRFTPCGSQDKQKFGWVSALGKHGDMMTHVSENRILVCAKREEKMLPASVIK
DSLNAKVEAMEAEEGRPLKKKEKDALKEDIVIDLLPRAFSKSQLTFVLIMPTEGLILVDAGSYKKAEDVLSLLRKTMGSL
PVVPAIPEIAVETTLTQWVKDGNLPQGFSLMEEAELKSLLDDGATIRCKKQELSSDEILSHIQANKVVTKLAINWQDRIR
FVLAEDCSIKRLAYSDELKEQNDDIPHEDRAARLDADFSLLCGEMSVFLPDLFNALGGLPHPEA
>Mature_304_residues
MWFKNCMVYRVNREVNFNADQLEKQLAEFRFTPCGSQDKQKFGWVSALGKHGDMMTHVSENRILVCAKREEKMLPASVIK
DSLNAKVEAMEAEEGRPLKKKEKDALKEDIVIDLLPRAFSKSQLTFVLIMPTEGLILVDAGSYKKAEDVLSLLRKTMGSL
PVVPAIPEIAVETTLTQWVKDGNLPQGFSLMEEAELKSLLDDGATIRCKKQELSSDEILSHIQANKVVTKLAINWQDRIR
FVLAEDCSIKRLAYSDELKEQNDDIPHEDRAARLDADFSLLCGEMSVFLPDLFNALGGLPHPEA

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=298, Percent_Identity=55.7046979865772, Blast_Score=356, Evalue=1e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 34208; Mature: 34208

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFKNCMVYRVNREVNFNADQLEKQLAEFRFTPCGSQDKQKFGWVSALGKHGDMMTHVSE
CCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEECC
NRILVCAKREEKMLPASVIKDSLNAKVEAMEAEEGRPLKKKEKDALKEDIVIDLLPRAFS
CCEEEEECCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
KSQLTFVLIMPTEGLILVDAGSYKKAEDVLSLLRKTMGSLPVVPAIPEIAVETTLTQWVK
CCCEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
DGNLPQGFSLMEEAELKSLLDDGATIRCKKQELSSDEILSHIQANKVVTKLAINWQDRIR
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHEECHHHHEE
FVLAEDCSIKRLAYSDELKEQNDDIPHEDRAARLDADFSLLCGEMSVFLPDLFNALGGLP
EEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
HPEA
CCCC
>Mature Secondary Structure
MWFKNCMVYRVNREVNFNADQLEKQLAEFRFTPCGSQDKQKFGWVSALGKHGDMMTHVSE
CCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEECC
NRILVCAKREEKMLPASVIKDSLNAKVEAMEAEEGRPLKKKEKDALKEDIVIDLLPRAFS
CCEEEEECCCCCCCCHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
KSQLTFVLIMPTEGLILVDAGSYKKAEDVLSLLRKTMGSLPVVPAIPEIAVETTLTQWVK
CCCEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
DGNLPQGFSLMEEAELKSLLDDGATIRCKKQELSSDEILSHIQANKVVTKLAINWQDRIR
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHEECHHHHEE
FVLAEDCSIKRLAYSDELKEQNDDIPHEDRAARLDADFSLLCGEMSVFLPDLFNALGGLP
EEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCC
HPEA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]