| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673799
Identifier: 147673799
GI number: 147673799
Start: 2839501
End: 2840085
Strand: Reverse
Name: 147673799
Synonym: VC0395_A2681
Alternate gene names: NA
Gene position: 2840085-2839501 (Counterclockwise)
Preceding gene: 147674728
Following gene: 147675184
Centisome position: 93.92
GC content: 44.1
Gene sequence:
>585_bases GTGTATCAAATTTTCCACCGCGCAACAGGTGTTGATCAAAACATCCTCCAATCCAGTTTTGATTTGGCAAAAAGTTGGAG AAATCACTATTCCAAGTTTTGCGGGGTCATCCTACAACTTCACCAGAATCAGCCCAGTGACAACAACCAGCAATTAAGCA CATTCCTCATCAAGCTGATGCAAGCTTTGCAGAAACATTACAACACGCCCAATATCGGTTACTTCTGGATTCGTGAACAG AGTGGCAGGGATAAACAACACTATCATCTGGCCGTATTTATCAGTGGTCATTGCTGCCAGCACAGCGGCACCATAGATAC ACTCGCCAACACACTTTGGAAGCAGCAAGACGAGCGCAATTTTAGTTATCAGGTCAAAAATAGAATCTACAAAGTTAATC GCTATGGCTTCGATAAGGAATGGCCATCCCTGCTAACTCGACTAAGCTACTTCGCCAAAAACGACACCAAAAGCCGCAGC CCTTCGCGAAATAGCTACGGTCGCAGCCAGCTTTTGAAAACGACAACTCAAGCAAAAACACTGAAAAATGCAAAAGTGAT CAGTTCCAGTGATCACTTTTACTGA
Upstream 100 bases:
>100_bases TGGCGACAAAGTTCGCAGGTATAAAGATATTGTTATGAGAGCTCGCATCCTTCTTCACCCGACTAAATCCAAACTAGCGC TTTACCGTCACGGTGATCAG
Downstream 100 bases:
>100_bases TCATCTGAACTGATCACTTTTAAACTGCGCAAATTTTACTGATCACTTCTGAAAATCATATTACAAACAATCACATAAAC AAAAACCATCACTACTGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MYQIFHRATGVDQNILQSSFDLAKSWRNHYSKFCGVILQLHQNQPSDNNQQLSTFLIKLMQALQKHYNTPNIGYFWIREQ SGRDKQHYHLAVFISGHCCQHSGTIDTLANTLWKQQDERNFSYQVKNRIYKVNRYGFDKEWPSLLTRLSYFAKNDTKSRS PSRNSYGRSQLLKTTTQAKTLKNAKVISSSDHFY
Sequences:
>Translated_194_residues MYQIFHRATGVDQNILQSSFDLAKSWRNHYSKFCGVILQLHQNQPSDNNQQLSTFLIKLMQALQKHYNTPNIGYFWIREQ SGRDKQHYHLAVFISGHCCQHSGTIDTLANTLWKQQDERNFSYQVKNRIYKVNRYGFDKEWPSLLTRLSYFAKNDTKSRS PSRNSYGRSQLLKTTTQAKTLKNAKVISSSDHFY >Mature_194_residues MYQIFHRATGVDQNILQSSFDLAKSWRNHYSKFCGVILQLHQNQPSDNNQQLSTFLIKLMQALQKHYNTPNIGYFWIREQ SGRDKQHYHLAVFISGHCCQHSGTIDTLANTLWKQQDERNFSYQVKNRIYKVNRYGFDKEWPSLLTRLSYFAKNDTKSRS PSRNSYGRSQLLKTTTQAKTLKNAKVISSSDHFY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22822; Mature: 22822
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYQIFHRATGVDQNILQSSFDLAKSWRNHYSKFCGVILQLHQNQPSDNNQQLSTFLIKLM CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH QALQKHYNTPNIGYFWIREQSGRDKQHYHLAVFISGHCCQHSGTIDTLANTLWKQQDERN HHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCC FSYQVKNRIYKVNRYGFDKEWPSLLTRLSYFAKNDTKSRSPSRNSYGRSQLLKTTTQAKT CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH LKNAKVISSSDHFY HHCCCEECCCCCCC >Mature Secondary Structure MYQIFHRATGVDQNILQSSFDLAKSWRNHYSKFCGVILQLHQNQPSDNNQQLSTFLIKLM CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH QALQKHYNTPNIGYFWIREQSGRDKQHYHLAVFISGHCCQHSGTIDTLANTLWKQQDERN HHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCC FSYQVKNRIYKVNRYGFDKEWPSLLTRLSYFAKNDTKSRSPSRNSYGRSQLLKTTTQAKT CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH LKNAKVISSSDHFY HHCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA