| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147674728
Identifier: 147674728
GI number: 147674728
Start: 2840304
End: 2840525
Strand: Reverse
Name: 147674728
Synonym: VC0395_A2682
Alternate gene names: NA
Gene position: 2840525-2840304 (Counterclockwise)
Preceding gene: 147675272
Following gene: 147673799
Centisome position: 93.93
GC content: 46.4
Gene sequence:
>222_bases ATGACCTTCGATCTCTCTCGTCAGTGTAATAAGGCGGCAATGCCACTACACATCATCAGCAAAAAAGAGCTCGCCAATCT GCTGCATGTCAATGAGCGCACAATCCATCGCATGGTCAAGGATAAGCGCTTACCTGAGCCTATGCGTACCGTAGGTGGCA ATAATGGTGGATGGCTTCTAACTACAATCCTAGAGTGGCAAAAAAGTCAAAAAGGGCATTAA
Upstream 100 bases:
>100_bases CTCCTCGTATCAAGTTAGGTAGCCGTTCCGTCGTTTGGCGACTTTCTGACCTTACACAGTGGCTAGACAAACAAGCAGGC CAATATTCGGAAGAAGCATA
Downstream 100 bases:
>100_bases TCGCCCTTTTTTATATACTGATGTCCGCTTTAGGCCGGAATTGTCTATAAAAACACGAAGTTTCTAGATAAGCACAAATG AGAACAACCCAGTAAAAACG
Product: putative transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MTFDLSRQCNKAAMPLHIISKKELANLLHVNERTIHRMVKDKRLPEPMRTVGGNNGGWLLTTILEWQKSQKGH
Sequences:
>Translated_73_residues MTFDLSRQCNKAAMPLHIISKKELANLLHVNERTIHRMVKDKRLPEPMRTVGGNNGGWLLTTILEWQKSQKGH >Mature_72_residues TFDLSRQCNKAAMPLHIISKKELANLLHVNERTIHRMVKDKRLPEPMRTVGGNNGGWLLTTILEWQKSQKGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8419; Mature: 8288
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFDLSRQCNKAAMPLHIISKKELANLLHVNERTIHRMVKDKRLPEPMRTVGGNNGGWLL CCCCCCCCCCCCCCCHHHHCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHCCCCCCCCHH TTILEWQKSQKGH HHHHHHHHCCCCC >Mature Secondary Structure TFDLSRQCNKAAMPLHIISKKELANLLHVNERTIHRMVKDKRLPEPMRTVGGNNGGWLL CCCCCCCCCCCCCCHHHHCHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHCCCCCCCCHH TTILEWQKSQKGH HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA