| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673786
Identifier: 147673786
GI number: 147673786
Start: 682452
End: 682991
Strand: Direct
Name: 147673786
Synonym: VC0395_A0641
Alternate gene names: NA
Gene position: 682452-682991 (Clockwise)
Preceding gene: 147674745
Following gene: 147675461
Centisome position: 22.57
GC content: 48.89
Gene sequence:
>540_bases ATGGCGTTAGTGGCGATATCATTATGGTTTGACCTGCTCTGGGCACTGGCTGTCTTGGGGCAGCAAACCTGGTTATGGCT CACCACATTACTGGTGGTTGCCACCTATGGCTTAACGGCAATCCAGCGCCATCCGCTGTTTGAAAAAATGGTTTGGATGG CGGTGGTTGGCATCATGATAGACAGCAGCAATATGCTGCTTGGGTTACTCACCTTTGCCGACGATCAATTTCCACTTTGG TTGGTGGCACTCTGGTTTGCGTTTACTTGGTATGCAGGCCACTTACTGCCGCAGCTTAACCAATATTCCCATACTCTTCT GTGTCTCGCCGGAGGCGTTTTGGGAAGTTTAAGTTATTGGTTTGGTTACCGAATGGGCGCGGTTGGTTGGGAATACCCCA CCTTTATCGTCATGTTGGCACTGTTTTTGGAATGGATAGGTATCACTTGGTTACTGTTGAAGGTAATGAGGCATGAAAAA AGGACTTATAACCCTATTCGTTTTGCTCGCGAGCGGACTTGGTTACGCCGCCGTCGCTAA
Upstream 100 bases:
>100_bases GTTTCATCCGTATGTGGCGTTATTACTTTTGTTACTGCGAAGGTGGCTTTTTAGCCCGTAGCATCAGTACCGTGCACATG ACTTTTGAACGAGATTAATC
Downstream 100 bases:
>100_bases TGCGGCGCAAGCGGAGCATAAAACTTTCCAGCGATGGGCAGAATGGCCAGTTGTTGGGCAGGCCACCCTTTCATGGCTGT GGCTGGATATCTACTCCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MALVAISLWFDLLWALAVLGQQTWLWLTTLLVVATYGLTAIQRHPLFEKMVWMAVVGIMIDSSNMLLGLLTFADDQFPLW LVALWFAFTWYAGHLLPQLNQYSHTLLCLAGGVLGSLSYWFGYRMGAVGWEYPTFIVMLALFLEWIGITWLLLKVMRHEK RTYNPIRFARERTWLRRRR
Sequences:
>Translated_179_residues MALVAISLWFDLLWALAVLGQQTWLWLTTLLVVATYGLTAIQRHPLFEKMVWMAVVGIMIDSSNMLLGLLTFADDQFPLW LVALWFAFTWYAGHLLPQLNQYSHTLLCLAGGVLGSLSYWFGYRMGAVGWEYPTFIVMLALFLEWIGITWLLLKVMRHEK RTYNPIRFARERTWLRRRR >Mature_178_residues ALVAISLWFDLLWALAVLGQQTWLWLTTLLVVATYGLTAIQRHPLFEKMVWMAVVGIMIDSSNMLLGLLTFADDQFPLWL VALWFAFTWYAGHLLPQLNQYSHTLLCLAGGVLGSLSYWFGYRMGAVGWEYPTFIVMLALFLEWIGITWLLLKVMRHEKR TYNPIRFARERTWLRRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20988; Mature: 20857
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALVAISLWFDLLWALAVLGQQTWLWLTTLLVVATYGLTAIQRHPLFEKMVWMAVVGIMI CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH DSSNMLLGLLTFADDQFPLWLVALWFAFTWYAGHLLPQLNQYSHTLLCLAGGVLGSLSYW CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGYRMGAVGWEYPTFIVMLALFLEWIGITWLLLKVMRHEKRTYNPIRFARERTWLRRRR HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure ALVAISLWFDLLWALAVLGQQTWLWLTTLLVVATYGLTAIQRHPLFEKMVWMAVVGIMI HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH DSSNMLLGLLTFADDQFPLWLVALWFAFTWYAGHLLPQLNQYSHTLLCLAGGVLGSLSYW CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGYRMGAVGWEYPTFIVMLALFLEWIGITWLLLKVMRHEKRTYNPIRFARERTWLRRRR HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA