| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675461
Identifier: 147675461
GI number: 147675461
Start: 682924
End: 683490
Strand: Direct
Name: 147675461
Synonym: VC0395_A0642
Alternate gene names: NA
Gene position: 682924-683490 (Clockwise)
Preceding gene: 147673786
Following gene: 147674832
Centisome position: 22.58
GC content: 50.97
Gene sequence:
>567_bases ATGAAAAAAGGACTTATAACCCTATTCGTTTTGCTCGCGAGCGGACTTGGTTACGCCGCCGTCGCTAATGCGGCGCAAGC GGAGCATAAAACTTTCCAGCGATGGGCAGAATGGCCAGTTGTTGGGCAGGCCACCCTTTCATGGCTGTGGCTGGATATCT ACTCCTCGCAGTTGCGAGCGCCTGATGGCCTGTATCATGAGTCGCAAGATGTCTCGCCACATCCTGTTGCTCTTGAGATC CGTTATTTGCGCGATATCAGCAGTAAACAGTTGGTGGATGCTACTGAGGATCAGTGGCGAAAACTGGGATTCACCGCACC GCAAACCCAAGCGTGGTTGAAGCAACTGCAGCAAATACTGCCGGATGTCGCGACGGGAGATCGCCTAGTGTATGTCTCTG ATGGGCAGCGCGGAGAGTTTTTCTTTAGTCGCCAACAACAGACGGAACGTTCGGTAGGCCGCATTGATGATGAAGCGTTT AATGATGCTTTTCTCTCCATTTGGCTGTCGCCGCAAACGGAATATTTAACCTTGCGTAATCAATTGATAGGAATGAATCG ACCATGA
Upstream 100 bases:
>100_bases ATGGGCGCGGTTGGTTGGGAATACCCCACCTTTATCGTCATGTTGGCACTGTTTTTGGAATGGATAGGTATCACTTGGTT ACTGTTGAAGGTAATGAGGC
Downstream 100 bases:
>100_bases GATTGGCTAAATGTTGGCTATTACTGCTCTGTATCTGGCTTAGTGGATGTTCGGCAGAGATTGATGATTATCGTGCGACG ACGCCTAAGTTTGATCTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MKKGLITLFVLLASGLGYAAVANAAQAEHKTFQRWAEWPVVGQATLSWLWLDIYSSQLRAPDGLYHESQDVSPHPVALEI RYLRDISSKQLVDATEDQWRKLGFTAPQTQAWLKQLQQILPDVATGDRLVYVSDGQRGEFFFSRQQQTERSVGRIDDEAF NDAFLSIWLSPQTEYLTLRNQLIGMNRP
Sequences:
>Translated_188_residues MKKGLITLFVLLASGLGYAAVANAAQAEHKTFQRWAEWPVVGQATLSWLWLDIYSSQLRAPDGLYHESQDVSPHPVALEI RYLRDISSKQLVDATEDQWRKLGFTAPQTQAWLKQLQQILPDVATGDRLVYVSDGQRGEFFFSRQQQTERSVGRIDDEAF NDAFLSIWLSPQTEYLTLRNQLIGMNRP >Mature_188_residues MKKGLITLFVLLASGLGYAAVANAAQAEHKTFQRWAEWPVVGQATLSWLWLDIYSSQLRAPDGLYHESQDVSPHPVALEI RYLRDISSKQLVDATEDQWRKLGFTAPQTQAWLKQLQQILPDVATGDRLVYVSDGQRGEFFFSRQQQTERSVGRIDDEAF NDAFLSIWLSPQTEYLTLRNQLIGMNRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21455; Mature: 21455
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGLITLFVLLASGLGYAAVANAAQAEHKTFQRWAEWPVVGQATLSWLWLDIYSSQLRA CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC PDGLYHESQDVSPHPVALEIRYLRDISSKQLVDATEDQWRKLGFTAPQTQAWLKQLQQIL CCCCCCCCCCCCCCCEEEEEHHHHCCCHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHC PDVATGDRLVYVSDGQRGEFFFSRQQQTERSVGRIDDEAFNDAFLSIWLSPQTEYLTLRN CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHCCEEEEEEECCCHHHHHHHH QLIGMNRP HHHCCCCC >Mature Secondary Structure MKKGLITLFVLLASGLGYAAVANAAQAEHKTFQRWAEWPVVGQATLSWLWLDIYSSQLRA CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC PDGLYHESQDVSPHPVALEIRYLRDISSKQLVDATEDQWRKLGFTAPQTQAWLKQLQQIL CCCCCCCCCCCCCCCEEEEEHHHHCCCHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHC PDVATGDRLVYVSDGQRGEFFFSRQQQTERSVGRIDDEAFNDAFLSIWLSPQTEYLTLRN CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHCCEEEEEEECCCHHHHHHHH QLIGMNRP HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]