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The map label for this gene is cvpA [H]

Identifier: 147673757

GI number: 147673757

Start: 564565

End: 565056

Strand: Direct

Name: cvpA [H]

Synonym: VC0395_A0524

Alternate gene names: 147673757

Gene position: 564565-565056 (Clockwise)

Preceding gene: 147675233

Following gene: 147673131

Centisome position: 18.67

GC content: 46.75

Gene sequence:

>492_bases
ATGAACTGGTTAGATATTGTCATTTTAAGTGTGATCGGCTTGTCTGCGCTGATCAGTCTTGTTCGCGGCTTTGCCAAAGA
AGCCTTGTCTTTAGTGATTTGGTTTGGGGCGTTTTATATCGCTTCGGAGTACTACGCCAAACTGGCGGTGTATTTCACCA
ACATTAAAGATGACATGTTTCGCAATGGAGCGGCGATTGCGGCTCTGTTTGTGGCGACATTGATCGTCGGTGCTATCGTT
AACTACGTGATTGCCCAACTGGTCGAAAAAACAGGACTCTCAGGAACCGACAGAATTCTCGGTGTGGTGTTTGGTGCACT
ACGTGGAGTGTTGATTGTCGCAGCAGGTCTGTTCTTCATGGATGCGTTTACCGCATTTCCAAATACAGAGTGGTGGAAAA
GCTCGCAGCTAGTGCCTGAATTCAGTCGCGTTATTGCTCCGTTCTTTGAACACCTAAAAGCAACATCAAGTTTTCTCTCT
GGCGCGATTTAG

Upstream 100 bases:

>100_bases
AAGGTCAATTGCTCAAATTTAAACCACTAAACCCATAAGAAAACGTTTGCGTCGCGTTTTTTTCTGTTAAAATGCGCGCC
AACTTAAGATGTAAGAACTC

Downstream 100 bases:

>100_bases
CGCCGGAGACGGTTGAAATCGAGGATTAGGACATGTGTGGTATTGTTGGAATCGTGGGTACAACGCCTGTAAACCAGTCA
ATTTATGACGCTTTGACGGT

Product: bacteriocin production protein

Products: NA

Alternate protein names: Protein dedE; Pur regulon 18 kDa protein [H]

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MNWLDIVILSVIGLSALISLVRGFAKEALSLVIWFGAFYIASEYYAKLAVYFTNIKDDMFRNGAAIAALFVATLIVGAIV
NYVIAQLVEKTGLSGTDRILGVVFGALRGVLIVAAGLFFMDAFTAFPNTEWWKSSQLVPEFSRVIAPFFEHLKATSSFLS
GAI

Sequences:

>Translated_163_residues
MNWLDIVILSVIGLSALISLVRGFAKEALSLVIWFGAFYIASEYYAKLAVYFTNIKDDMFRNGAAIAALFVATLIVGAIV
NYVIAQLVEKTGLSGTDRILGVVFGALRGVLIVAAGLFFMDAFTAFPNTEWWKSSQLVPEFSRVIAPFFEHLKATSSFLS
GAI
>Mature_163_residues
MNWLDIVILSVIGLSALISLVRGFAKEALSLVIWFGAFYIASEYYAKLAVYFTNIKDDMFRNGAAIAALFVATLIVGAIV
NYVIAQLVEKTGLSGTDRILGVVFGALRGVLIVAAGLFFMDAFTAFPNTEWWKSSQLVPEFSRVIAPFFEHLKATSSFLS
GAI

Specific function: Required for colicin V production from plasmid IncFI ColV3-K30 [H]

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788652, Length=162, Percent_Identity=62.962962962963, Blast_Score=207, Evalue=2e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003825 [H]

Pfam domain/function: PF02674 Colicin_V [H]

EC number: NA

Molecular weight: Translated: 17770; Mature: 17770

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWLDIVILSVIGLSALISLVRGFAKEALSLVIWFGAFYIASEYYAKLAVYFTNIKDDMF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNGAAIAALFVATLIVGAIVNYVIAQLVEKTGLSGTDRILGVVFGALRGVLIVAAGLFFM
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DAFTAFPNTEWWKSSQLVPEFSRVIAPFFEHLKATSSFLSGAI
HHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNWLDIVILSVIGLSALISLVRGFAKEALSLVIWFGAFYIASEYYAKLAVYFTNIKDDMF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNGAAIAALFVATLIVGAIVNYVIAQLVEKTGLSGTDRILGVVFGALRGVLIVAAGLFFM
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DAFTAFPNTEWWKSSQLVPEFSRVIAPFFEHLKATSSFLSGAI
HHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3040734; 2991286; 9205837; 9278503; 2542219 [H]