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The map label for this gene is treC [H]

Identifier: 147673664

GI number: 147673664

Start: 462046

End: 463734

Strand: Direct

Name: treC [H]

Synonym: VC0395_A0433

Alternate gene names: 147673664

Gene position: 462046-463734 (Clockwise)

Preceding gene: 147675677

Following gene: 147674519

Centisome position: 15.28

GC content: 47.07

Gene sequence:

>1689_bases
ATGAGTAGCTCAACCCAATCCATGCCTTGGTGGAAAACCGCTGCAATTTATCAAATTTATCCGAAAAGTTTTTGCGATAG
TGGCGCGAAGGGCGTGGGCGATCTGCAAGGCATTATCAGCAAGCTCGATTATTTGCAAAAGCTTGGGATTGAAGCGATTT
GGCTGACGCCGATTTATCAATCGCCTATGGTCGATAATGGGTATGACATTGCCGATTATTACGCGATTAATCCAGACTTT
GGCACGATGCAAGATTTCGAACAACTGCTGAAAGAAGCCCATCGTCGTGGTATGCGCATCATCATGGATATCGTGGTTAA
CCACACCTCAACCGAACACGCTTGGTTCCAATCTGCATTGGGCGATCGCAATAGCCCTTACCGTGATTACTATATTTGGC
GTAAGCCGGTTAACGGTGGTGTGCCGAACAACTGGCAATCCAAATTTGGCGGGAGTGCGTGGGCGCTGGATGAAGCGACC
GGTGAGTATTATTTGCATCTGTTTGCCAAAGAGCAGGCCGATTTGAACTGGGAAAATCCGCAAGTTCGAGAAGAAGTAAA
AAACATCATCGGATTTTGGGCTGAAAAAGGTGTCGATGGCTTCCGACTTGACGTGATTAACCTCATTTCCAAGCAACAAG
ATTTTACCAATGATGACATCGGTGATGGTCGTCGTTTTTACACCGATGGCCCAAGAGTGCATGAGTATCTGCAAGAGATC
AGCCGTGATGTTTTCCAGCGTTATGGCAGCGTAACCGTCGGCGAAATGTCTTCAACCACCTTAGAACATTGCCAACAATA
TTCTGCGCTCGATGGTCGAGAGCTTTCTATGGTGTTTAATTTCCATCATTTGAAAGTCGATTATCCGAATGGCGAAAAGT
GGACGAAAGCGCCGTTTGATTTTCTGCAACTCAAGCAAATTTTCAATCATTGGCAAACGGGGCTGAATGGCAAAGGATGG
GGCGCGCTGTTTTGGTGTAACCATGATCAGCCGCGAATTGTGAGCCGTTTAGGTGATGATCAGCAGTACCGAGTTGAGTC
AGCCAAAATGCTGGCGGCCACCATTCACCTAATGCAAGGCACACCTTATATCTACCAAGGTGAAGAGATTGGAATGACCA
ACCCTGGCTTTACGTCGATCAAGCAGTATCGCGATGTGGAAAGCATCAACATTCACCAAATCATGGTGCAGCAACAAGGT
GTCTCTGAAAGTGACATGCTGGCGATTTTGGCGCAAAAATCTCGTGATAATTCACGCACGCCAATGCAGTGGGATGCCAG
TCTCAACGCTGGATTTACTCGTGGAGAACCTTGGATTGAAGTGGCGCATAACTATCCTGAAATCAATGCACAGGCCGCGT
TAGAAGACCCGCATTCGGTGTTCTATTTCTACCGTCGTTTGCTATCGCTACGTAAGAAAGTGGCGGTGATTACGGACGGT
GATTACACCGACTTGTTGCCTGAGCATAAAGAGATTTTTGCTTATCAGCGTCGTAATCAGAAACAAGTGTTGATCTGTTT
GAATAACTATTACGGTCACGAAGCCGAATGCGTTCTGCCAGAATTACCGCTCGATGATGCGCTCTACTTGCTAGGCAACT
ATCCGGGTATTGAATTACAGCGCGTGTTGGCGCACCAAGTGTTACGTCCATACGAAACACGCATCATCCTGATTGAGTCA
CCCCTATAG

Upstream 100 bases:

>100_bases
CTGGCCGTTTCGGCTGCCTAATCTCTACCCGATTGAGGAGTGGTTTACGCCACTCCTTTCTCTGTTTTTGAGTCAATTTT
TTTGAGTAAGTGAGAGTAGT

Downstream 100 bases:

>100_bases
GATTCAATCACTTTTCAGCCCCGCATCGTCGGGGCTTTTTTATGGAGAGTGGAAAATATAGGTAGTGAAAATAGACAGGG
TGGGTGACAAGGGATGGATT

Product: trehalose-6-phosphate hydrolase

Products: NA

Alternate protein names: Alpha,alpha-phosphotrehalase [H]

Number of amino acids: Translated: 562; Mature: 561

Protein sequence:

>562_residues
MSSSTQSMPWWKTAAIYQIYPKSFCDSGAKGVGDLQGIISKLDYLQKLGIEAIWLTPIYQSPMVDNGYDIADYYAINPDF
GTMQDFEQLLKEAHRRGMRIIMDIVVNHTSTEHAWFQSALGDRNSPYRDYYIWRKPVNGGVPNNWQSKFGGSAWALDEAT
GEYYLHLFAKEQADLNWENPQVREEVKNIIGFWAEKGVDGFRLDVINLISKQQDFTNDDIGDGRRFYTDGPRVHEYLQEI
SRDVFQRYGSVTVGEMSSTTLEHCQQYSALDGRELSMVFNFHHLKVDYPNGEKWTKAPFDFLQLKQIFNHWQTGLNGKGW
GALFWCNHDQPRIVSRLGDDQQYRVESAKMLAATIHLMQGTPYIYQGEEIGMTNPGFTSIKQYRDVESINIHQIMVQQQG
VSESDMLAILAQKSRDNSRTPMQWDASLNAGFTRGEPWIEVAHNYPEINAQAALEDPHSVFYFYRRLLSLRKKVAVITDG
DYTDLLPEHKEIFAYQRRNQKQVLICLNNYYGHEAECVLPELPLDDALYLLGNYPGIELQRVLAHQVLRPYETRIILIES
PL

Sequences:

>Translated_562_residues
MSSSTQSMPWWKTAAIYQIYPKSFCDSGAKGVGDLQGIISKLDYLQKLGIEAIWLTPIYQSPMVDNGYDIADYYAINPDF
GTMQDFEQLLKEAHRRGMRIIMDIVVNHTSTEHAWFQSALGDRNSPYRDYYIWRKPVNGGVPNNWQSKFGGSAWALDEAT
GEYYLHLFAKEQADLNWENPQVREEVKNIIGFWAEKGVDGFRLDVINLISKQQDFTNDDIGDGRRFYTDGPRVHEYLQEI
SRDVFQRYGSVTVGEMSSTTLEHCQQYSALDGRELSMVFNFHHLKVDYPNGEKWTKAPFDFLQLKQIFNHWQTGLNGKGW
GALFWCNHDQPRIVSRLGDDQQYRVESAKMLAATIHLMQGTPYIYQGEEIGMTNPGFTSIKQYRDVESINIHQIMVQQQG
VSESDMLAILAQKSRDNSRTPMQWDASLNAGFTRGEPWIEVAHNYPEINAQAALEDPHSVFYFYRRLLSLRKKVAVITDG
DYTDLLPEHKEIFAYQRRNQKQVLICLNNYYGHEAECVLPELPLDDALYLLGNYPGIELQRVLAHQVLRPYETRIILIES
PL
>Mature_561_residues
SSSTQSMPWWKTAAIYQIYPKSFCDSGAKGVGDLQGIISKLDYLQKLGIEAIWLTPIYQSPMVDNGYDIADYYAINPDFG
TMQDFEQLLKEAHRRGMRIIMDIVVNHTSTEHAWFQSALGDRNSPYRDYYIWRKPVNGGVPNNWQSKFGGSAWALDEATG
EYYLHLFAKEQADLNWENPQVREEVKNIIGFWAEKGVDGFRLDVINLISKQQDFTNDDIGDGRRFYTDGPRVHEYLQEIS
RDVFQRYGSVTVGEMSSTTLEHCQQYSALDGRELSMVFNFHHLKVDYPNGEKWTKAPFDFLQLKQIFNHWQTGLNGKGWG
ALFWCNHDQPRIVSRLGDDQQYRVESAKMLAATIHLMQGTPYIYQGEEIGMTNPGFTSIKQYRDVESINIHQIMVQQQGV
SESDMLAILAQKSRDNSRTPMQWDASLNAGFTRGEPWIEVAHNYPEINAQAALEDPHSVFYFYRRLLSLRKKVAVITDGD
YTDLLPEHKEIFAYQRRNQKQVLICLNNYYGHEAECVLPELPLDDALYLLGNYPGIELQRVLAHQVLRPYETRIILIESP
L

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=533, Percent_Identity=30.2063789868668, Blast_Score=246, Evalue=5e-65,
Organism=Homo sapiens, GI61744477, Length=121, Percent_Identity=32.2314049586777, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI61744479, Length=121, Percent_Identity=32.2314049586777, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI65506891, Length=121, Percent_Identity=32.2314049586777, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI61744475, Length=121, Percent_Identity=32.2314049586777, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI61744481, Length=121, Percent_Identity=32.2314049586777, Blast_Score=73, Evalue=7e-13,
Organism=Homo sapiens, GI61744483, Length=121, Percent_Identity=32.2314049586777, Blast_Score=73, Evalue=7e-13,
Organism=Escherichia coli, GI1790687, Length=500, Percent_Identity=61.8, Blast_Score=655, Evalue=0.0,
Organism=Escherichia coli, GI1786604, Length=195, Percent_Identity=29.7435897435897, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1789995, Length=91, Percent_Identity=34.0659340659341, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI25147709, Length=567, Percent_Identity=24.6913580246914, Blast_Score=132, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI32565753, Length=212, Percent_Identity=30.188679245283, Blast_Score=111, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6321726, Length=587, Percent_Identity=36.7972742759796, Blast_Score=379, Evalue=1e-105,
Organism=Saccharomyces cerevisiae, GI6324416, Length=581, Percent_Identity=37.3493975903614, Blast_Score=372, Evalue=1e-103,
Organism=Saccharomyces cerevisiae, GI6322241, Length=581, Percent_Identity=37.3493975903614, Blast_Score=372, Evalue=1e-103,
Organism=Saccharomyces cerevisiae, GI6322021, Length=581, Percent_Identity=37.3493975903614, Blast_Score=372, Evalue=1e-103,
Organism=Saccharomyces cerevisiae, GI6322245, Length=583, Percent_Identity=37.0497427101201, Blast_Score=371, Evalue=1e-103,
Organism=Saccharomyces cerevisiae, GI6321731, Length=579, Percent_Identity=37.4784110535406, Blast_Score=363, Evalue=1e-101,
Organism=Saccharomyces cerevisiae, GI6319776, Length=579, Percent_Identity=37.3056994818653, Blast_Score=362, Evalue=1e-100,
Organism=Drosophila melanogaster, GI24586593, Length=542, Percent_Identity=35.6088560885609, Blast_Score=287, Evalue=1e-77,
Organism=Drosophila melanogaster, GI221330053, Length=509, Percent_Identity=35.3634577603143, Blast_Score=279, Evalue=3e-75,
Organism=Drosophila melanogaster, GI24583749, Length=543, Percent_Identity=34.4383057090239, Blast_Score=278, Evalue=6e-75,
Organism=Drosophila melanogaster, GI24583747, Length=543, Percent_Identity=34.4383057090239, Blast_Score=278, Evalue=6e-75,
Organism=Drosophila melanogaster, GI24586599, Length=546, Percent_Identity=33.5164835164835, Blast_Score=278, Evalue=1e-74,
Organism=Drosophila melanogaster, GI24583745, Length=541, Percent_Identity=33.641404805915, Blast_Score=269, Evalue=4e-72,
Organism=Drosophila melanogaster, GI45549022, Length=535, Percent_Identity=32.8971962616822, Blast_Score=268, Evalue=7e-72,
Organism=Drosophila melanogaster, GI24586591, Length=507, Percent_Identity=35.1084812623274, Blast_Score=266, Evalue=3e-71,
Organism=Drosophila melanogaster, GI24586597, Length=500, Percent_Identity=34, Blast_Score=265, Evalue=4e-71,
Organism=Drosophila melanogaster, GI24586589, Length=494, Percent_Identity=35.82995951417, Blast_Score=254, Evalue=9e-68,
Organism=Drosophila melanogaster, GI24586587, Length=506, Percent_Identity=31.6205533596838, Blast_Score=243, Evalue=3e-64,
Organism=Drosophila melanogaster, GI281360393, Length=487, Percent_Identity=32.6488706365503, Blast_Score=212, Evalue=7e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR012769 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =3.2.1.93 [H]

Molecular weight: Translated: 64841; Mature: 64710

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSTQSMPWWKTAAIYQIYPKSFCDSGAKGVGDLQGIISKLDYLQKLGIEAIWLTPIYQ
CCCCCCCCCCCHHHHEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCC
SPMVDNGYDIADYYAINPDFGTMQDFEQLLKEAHRRGMRIIMDIVVNHTSTEHAWFQSAL
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHEEHHHHHCCCCCHHHHHHHHH
GDRNSPYRDYYIWRKPVNGGVPNNWQSKFGGSAWALDEATGEYYLHLFAKEQADLNWENP
CCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCEEEECCCCCCEEEEEEECCCCCCCCCCC
QVREEVKNIIGFWAEKGVDGFRLDVINLISKQQDFTNDDIGDGRRFYTDGPRVHEYLQEI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHH
SRDVFQRYGSVTVGEMSSTTLEHCQQYSALDGRELSMVFNFHHLKVDYPNGEKWTKAPFD
HHHHHHHHCCEEECCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCCCCCCHH
FLQLKQIFNHWQTGLNGKGWGALFWCNHDQPRIVSRLGDDQQYRVESAKMLAATIHLMQG
HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
TPYIYQGEEIGMTNPGFTSIKQYRDVESINIHQIMVQQQGVSESDMLAILAQKSRDNSRT
CCEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHEEEHHCCCCHHHHHHHHHHHCCCCCCC
PMQWDASLNAGFTRGEPWIEVAHNYPEINAQAALEDPHSVFYFYRRLLSLRKKVAVITDG
CEEECCCCCCCCCCCCCCEEEECCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCEEEEECC
DYTDLLPEHKEIFAYQRRNQKQVLICLNNYYGHEAECVLPELPLDDALYLLGNYPGIELQ
CHHHCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCCCHHHHHHCCCCCHHHH
RVLAHQVLRPYETRIILIESPL
HHHHHHHHCCCCCEEEEEECCC
>Mature Secondary Structure 
SSSTQSMPWWKTAAIYQIYPKSFCDSGAKGVGDLQGIISKLDYLQKLGIEAIWLTPIYQ
CCCCCCCCCCHHHHEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCC
SPMVDNGYDIADYYAINPDFGTMQDFEQLLKEAHRRGMRIIMDIVVNHTSTEHAWFQSAL
CCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHEEHHHHHCCCCCHHHHHHHHH
GDRNSPYRDYYIWRKPVNGGVPNNWQSKFGGSAWALDEATGEYYLHLFAKEQADLNWENP
CCCCCCCCCEEEEECCCCCCCCCCHHHHCCCCEEEECCCCCCEEEEEEECCCCCCCCCCC
QVREEVKNIIGFWAEKGVDGFRLDVINLISKQQDFTNDDIGDGRRFYTDGPRVHEYLQEI
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHH
SRDVFQRYGSVTVGEMSSTTLEHCQQYSALDGRELSMVFNFHHLKVDYPNGEKWTKAPFD
HHHHHHHHCCEEECCCHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCCCCCCHH
FLQLKQIFNHWQTGLNGKGWGALFWCNHDQPRIVSRLGDDQQYRVESAKMLAATIHLMQG
HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
TPYIYQGEEIGMTNPGFTSIKQYRDVESINIHQIMVQQQGVSESDMLAILAQKSRDNSRT
CCEEEECCCCCCCCCCHHHHHHHCCCCCCCHHHEEEHHCCCCHHHHHHHHHHHCCCCCCC
PMQWDASLNAGFTRGEPWIEVAHNYPEINAQAALEDPHSVFYFYRRLLSLRKKVAVITDG
CEEECCCCCCCCCCCCCCEEEECCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCEEEEECC
DYTDLLPEHKEIFAYQRRNQKQVLICLNNYYGHEAECVLPELPLDDALYLLGNYPGIELQ
CHHHCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCEEEECCCCCCHHHHHHCCCCCHHHH
RVLAHQVLRPYETRIILIESPL
HHHHHHHHCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7651129; 8969503; 9384377; 7751281 [H]