| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673631
Identifier: 147673631
GI number: 147673631
Start: 2898444
End: 2899385
Strand: Reverse
Name: 147673631
Synonym: VC0395_A2739
Alternate gene names: NA
Gene position: 2899385-2898444 (Counterclockwise)
Preceding gene: 147675598
Following gene: 147675493
Centisome position: 95.88
GC content: 52.44
Gene sequence:
>942_bases TTGCTTAATGGCATATTGAGTGCCCTCATCACTCCCAACCGCAAGGATGACGCAATGGGTTACGAATGGCTGGCACTTGC CGCAGCCTGTCTTTGGGCTATCGCCAGTTTACTTTCTATCACTCCCGCGAAACACCTCGGCTCTTTTGCTTATAGCCGCT GGCGTATGGGGTGTACCTCCGTCATCTTAACCACCATTGCCCTCTTCAGCGGAGGTTGGTCAACCGTACACAGCAGTGCG ATTCCAGCCATGATGTTGTCGGGGTTTATTGGAATTTTCATCGGTGATACCGCGCTTTTTGCTTGCCTGAATCGCATGGG GCCAAGGCAGTCCGGCTTACTCTTCTCCTGTCATGCGGTGTTTTCTGCCGTGCTCGGTTATTTCCTGTTTAGTGAAAGCA TGACCAAGCAAGAGCTATTCGGCTCTACTTTAGTGTTTAGCGGCGTTCTGATGGCGATTTTCTTTGGTCGCCGTGGGCAA ACTGGGCCTAGTTTGGATAGCATCAATGGCAGTGTGTGGGTTGGAATTGGACTCGGCTTAACCGCCGCCTTATGCCAAGC CCTCGGGGGCATTATTGCCAAACCCGTGATGCAAACAGAGATCGATCCGATTGCTGCCTCTGCGATGCGGATGATCACCG CCTTTGCGGCTCACTCTTTACTGCGTTTAACCGGCGCACGCATTGCTCGTCCTACACAAATCATCACGCTCAATATCTTT TTGGTCACGGCACTCAACGGCTTTATTGCCATGGCGGTTGGTATGACGCTGATCCTCTACGCTCTGCGTGAGGGGAATGT CGGCATGGTCGCACTGCTCTCTTCCACCACACCCATCATGCTACTACCACTGCTTTGGATCTACACTAAACAGTGTCCAA ACCGCTATGCTTGGTTAGGGGCTATCCTTGCCGTTGGGGGCACCAGCTTGTTGGTGTCTTAA
Upstream 100 bases:
>100_bases TAAACTCCCTCTTCCTCCCCTCTTTCACAGCTTGTCATCACTCTCGAGATAGCAAGCTGTGAACCTTCTAATCGCACTGA AATTGCTTTTGTTTTCCTGA
Downstream 100 bases:
>100_bases ACGCGATTTTGATCAATAGGCTACATTTACTTGCATTGATAGAGAGAATCATTGATCTTAACCGGATGCAAAACGTCTAG ATTGTAGTAAAATTACGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Drug/Metabolite Exporter Family Protein; DMT Family Permease; Integral Membrane; Permease DMT Superfamily; Conserved Domain Protein; Transporter Drug/Metabolite Exporter Family; Integral Membrane Protein; Permeases Of Drug/Metabolite Transporter
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MLNGILSALITPNRKDDAMGYEWLALAAACLWAIASLLSITPAKHLGSFAYSRWRMGCTSVILTTIALFSGGWSTVHSSA IPAMMLSGFIGIFIGDTALFACLNRMGPRQSGLLFSCHAVFSAVLGYFLFSESMTKQELFGSTLVFSGVLMAIFFGRRGQ TGPSLDSINGSVWVGIGLGLTAALCQALGGIIAKPVMQTEIDPIAASAMRMITAFAAHSLLRLTGARIARPTQIITLNIF LVTALNGFIAMAVGMTLILYALREGNVGMVALLSSTTPIMLLPLLWIYTKQCPNRYAWLGAILAVGGTSLLVS
Sequences:
>Translated_313_residues MLNGILSALITPNRKDDAMGYEWLALAAACLWAIASLLSITPAKHLGSFAYSRWRMGCTSVILTTIALFSGGWSTVHSSA IPAMMLSGFIGIFIGDTALFACLNRMGPRQSGLLFSCHAVFSAVLGYFLFSESMTKQELFGSTLVFSGVLMAIFFGRRGQ TGPSLDSINGSVWVGIGLGLTAALCQALGGIIAKPVMQTEIDPIAASAMRMITAFAAHSLLRLTGARIARPTQIITLNIF LVTALNGFIAMAVGMTLILYALREGNVGMVALLSSTTPIMLLPLLWIYTKQCPNRYAWLGAILAVGGTSLLVS >Mature_313_residues MLNGILSALITPNRKDDAMGYEWLALAAACLWAIASLLSITPAKHLGSFAYSRWRMGCTSVILTTIALFSGGWSTVHSSA IPAMMLSGFIGIFIGDTALFACLNRMGPRQSGLLFSCHAVFSAVLGYFLFSESMTKQELFGSTLVFSGVLMAIFFGRRGQ TGPSLDSINGSVWVGIGLGLTAALCQALGGIIAKPVMQTEIDPIAASAMRMITAFAAHSLLRLTGARIARPTQIITLNIF LVTALNGFIAMAVGMTLILYALREGNVGMVALLSSTTPIMLLPLLWIYTKQCPNRYAWLGAILAVGGTSLLVS
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33241; Mature: 33241
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNGILSALITPNRKDDAMGYEWLALAAACLWAIASLLSITPAKHLGSFAYSRWRMGCTS CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VILTTIALFSGGWSTVHSSAIPAMMLSGFIGIFIGDTALFACLNRMGPRQSGLLFSCHAV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHH FSAVLGYFLFSESMTKQELFGSTLVFSGVLMAIFFGRRGQTGPSLDSINGSVWVGIGLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHH TAALCQALGGIIAKPVMQTEIDPIAASAMRMITAFAAHSLLRLTGARIARPTQIITLNIF HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH LVTALNGFIAMAVGMTLILYALREGNVGMVALLSSTTPIMLLPLLWIYTKQCPNRYAWLG HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHH AILAVGGTSLLVS HHHHHCCHHHHCC >Mature Secondary Structure MLNGILSALITPNRKDDAMGYEWLALAAACLWAIASLLSITPAKHLGSFAYSRWRMGCTS CCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH VILTTIALFSGGWSTVHSSAIPAMMLSGFIGIFIGDTALFACLNRMGPRQSGLLFSCHAV HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHH FSAVLGYFLFSESMTKQELFGSTLVFSGVLMAIFFGRRGQTGPSLDSINGSVWVGIGLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHH TAALCQALGGIIAKPVMQTEIDPIAASAMRMITAFAAHSLLRLTGARIARPTQIITLNIF HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH LVTALNGFIAMAVGMTLILYALREGNVGMVALLSSTTPIMLLPLLWIYTKQCPNRYAWLG HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHH AILAVGGTSLLVS HHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA