| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is pabA [H]
Identifier: 147673532
GI number: 147673532
Start: 2342011
End: 2342592
Strand: Reverse
Name: pabA [H]
Synonym: VC0395_A2196
Alternate gene names: 147673532
Gene position: 2342592-2342011 (Counterclockwise)
Preceding gene: 147674583
Following gene: 147673566
Centisome position: 77.46
GC content: 49.31
Gene sequence:
>582_bases ATGCTACTGATGATCGATAACTACGATTCGTTTACTTACAACCTGTACCAATACTTTTGTGAGTTAGGGGCGCAGGTCAA AGTGGTACGTAATGATGAGATCGATCTGGATGGCATCCGCGCGCTGGCACCAACACATTTGGTGATTTCTCCGGGACCAT GCACGCCTAATGAAGCGGGGATCTCGCTCGCGGCGATTGAAGCGTTTGCAGGCCAACTGCCCATCCTTGGCGTTTGTTTA GGGCATCAAGCGATTGCGCAAGCGTTTGGTGGGCAAGTGGTACGCGCTCGTCAGGTCATGCATGGCAAAACCTCACCCAT TCGTCATAAGGGACAAGGCTTATTTAGCGGATTGAATAACCCGCTAACGGTGACGCGTTACCATTCCTTGGTGGTGAAAA ATGACACTCTGCCCGAGTGCTTTGAGTTAACCGCATGGACTGAGCTTATTGATGGCCGCATTGACGAAATCATGGGTTTT CAACATAAAACCCTAGCCCTTGAAGCGGTGCAGTTTCACCCTGAGTCGATAAAGACAGAACAAGGCCATCAATTGTTGGC GAATTTTTTAAACCGCACCTAA
Upstream 100 bases:
>100_bases CAAACGTCTGCTCAAGTCGGTTAACTTTGCTTAATGCTTGCCTTTAGAGTGGAGTGCTGCACAATAACGCGCACTTTATT TCCATCCCAAGGTCGTATGC
Downstream 100 bases:
>100_bases TCCCAAAAACGATGCGTAACCAGTGCCGATCGTACTGACTGCGATCACTTTTTTTGCTTTCTATCAAAGATTTATCCGCA AGCTATCATTTTTCAAGCTT
Product: para-aminobenzoate synthase component II
Products: NA
Alternate protein names: Glutamine amido-transferase [H]
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MLLMIDNYDSFTYNLYQYFCELGAQVKVVRNDEIDLDGIRALAPTHLVISPGPCTPNEAGISLAAIEAFAGQLPILGVCL GHQAIAQAFGGQVVRARQVMHGKTSPIRHKGQGLFSGLNNPLTVTRYHSLVVKNDTLPECFELTAWTELIDGRIDEIMGF QHKTLALEAVQFHPESIKTEQGHQLLANFLNRT
Sequences:
>Translated_193_residues MLLMIDNYDSFTYNLYQYFCELGAQVKVVRNDEIDLDGIRALAPTHLVISPGPCTPNEAGISLAAIEAFAGQLPILGVCL GHQAIAQAFGGQVVRARQVMHGKTSPIRHKGQGLFSGLNNPLTVTRYHSLVVKNDTLPECFELTAWTELIDGRIDEIMGF QHKTLALEAVQFHPESIKTEQGHQLLANFLNRT >Mature_193_residues MLLMIDNYDSFTYNLYQYFCELGAQVKVVRNDEIDLDGIRALAPTHLVISPGPCTPNEAGISLAAIEAFAGQLPILGVCL GHQAIAQAFGGQVVRARQVMHGKTSPIRHKGQGLFSGLNNPLTVTRYHSLVVKNDTLPECFELTAWTELIDGRIDEIMGF QHKTLALEAVQFHPESIKTEQGHQLLANFLNRT
Specific function: Catalyzes The Biosynthesis Of 4-Amino-4-Deoxychorismate (Adc) From Chorismate And Glutamine. [C]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789760, Length=192, Percent_Identity=70.3125, Blast_Score=283, Evalue=6e-78, Organism=Escherichia coli, GI1787517, Length=192, Percent_Identity=41.1458333333333, Blast_Score=141, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6322638, Length=191, Percent_Identity=48.6910994764398, Blast_Score=191, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6324361, Length=211, Percent_Identity=31.7535545023697, Blast_Score=75, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 21314; Mature: 21314
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLMIDNYDSFTYNLYQYFCELGAQVKVVRNDEIDLDGIRALAPTHLVISPGPCTPNEAG CEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCEEEEECCCCCCCCCC ISLAAIEAFAGQLPILGVCLGHQAIAQAFGGQVVRARQVMHGKTSPIRHKGQGLFSGLNN EEHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCC PLTVTRYHSLVVKNDTLPECFELTAWTELIDGRIDEIMGFQHKTLALEAVQFHPESIKTE CEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCCCCCCC QGHQLLANFLNRT HHHHHHHHHHCCC >Mature Secondary Structure MLLMIDNYDSFTYNLYQYFCELGAQVKVVRNDEIDLDGIRALAPTHLVISPGPCTPNEAG CEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCEEEEECCCCCCCCCC ISLAAIEAFAGQLPILGVCLGHQAIAQAFGGQVVRARQVMHGKTSPIRHKGQGLFSGLNN EEHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCC PLTVTRYHSLVVKNDTLPECFELTAWTELIDGRIDEIMGFQHKTLALEAVQFHPESIKTE CEEEEEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCCCCCCC QGHQLLANFLNRT HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2105306; 10984043 [H]