Definition Vibrio cholerae O395 chromosome 2, complete sequence.
Accession NC_009457
Length 3,024,069

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The map label for this gene is 147673518

Identifier: 147673518

GI number: 147673518

Start: 2356787

End: 2357305

Strand: Reverse

Name: 147673518

Synonym: VC0395_A2208

Alternate gene names: NA

Gene position: 2357305-2356787 (Counterclockwise)

Preceding gene: 147674321

Following gene: 147673064

Centisome position: 77.95

GC content: 49.13

Gene sequence:

>519_bases
ATGAAAAATAAGCCACTTGGATTATGGCTGATGAGTTTGCTGGTGTTGGTCGGGTGTAAGGCGAACCAAGATGATTTGAC
CTCATACGTCGCGCAAGTTGAGCGTGAAGCGCGCAAAGAAGTAACTAAGCTCAAACCCATTTTAGAGTTTGAAGCCACGC
CCTATCAGCAGCACAAGGGGCGTGAGCCGTTTGTCTTACCGAAAGAAGCGTTAGTGCAAAACCAACCGCTGGCCAAAGCC
GACTGTTGGCAACCCGTGCCACGTGCGAAAAATGGGCCGTTGGAGCGTTATCCATTGCACCAATTGCGCTTAAAAGGGGT
GATGAGCAGCGGGGGCAGTATCTCTGCCTTAGTGCAAACGCCGGCAGGGAGTGTGGTCAAGGTTAAGGCGGGTCAATATG
TCGGAATCAATAATGGCAAAGTCACCCGAGTCGACGACAACTATTTGTTAATTAATGAAACTTTGCCTGATGGCTTAGGG
TGTTGGAATCAGCGTAACGTCAAGCTGGCTTTAAAATAA

Upstream 100 bases:

>100_bases
AACTTCGACGATGTGGACTGGCAGCGTGTCAGCCAAGAGAGTAGCACGCTGCACTTTCGAGTCAGAGCCTACACCTACCA
ATTTAAGCAGGAGGTGGATG

Downstream 100 bases:

>100_bases
TCGGTTGAAGTATAGAGATATAACGATGAAAAATGGATTGAAAACTTATGTCGCACAGACTTGGCTGACCTTGTGGGTTG
GTTTGGCACTTTGTGCTTCT

Product: putative fimbrial assembly protein PilP

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilP; Pilus Assembly Protein PilQ; Type 4 Fimbrial Biogenesis Protein PilP; Fimbrial Assembly Protein; Fimbrial Assembly Protein PilP; Tfp Pilus Assembly Protein PilP; Pilus Assembly Protein; Type IV Pilus Assembly Protein Pilp; Type IV Pilus Assembly Protein PilP; Pili Assembly Protein PilP; Methyl-Accepting Chemotaxis Sensory Transducer

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKNKPLGLWLMSLLVLVGCKANQDDLTSYVAQVEREARKEVTKLKPILEFEATPYQQHKGREPFVLPKEALVQNQPLAKA
DCWQPVPRAKNGPLERYPLHQLRLKGVMSSGGSISALVQTPAGSVVKVKAGQYVGINNGKVTRVDDNYLLINETLPDGLG
CWNQRNVKLALK

Sequences:

>Translated_172_residues
MKNKPLGLWLMSLLVLVGCKANQDDLTSYVAQVEREARKEVTKLKPILEFEATPYQQHKGREPFVLPKEALVQNQPLAKA
DCWQPVPRAKNGPLERYPLHQLRLKGVMSSGGSISALVQTPAGSVVKVKAGQYVGINNGKVTRVDDNYLLINETLPDGLG
CWNQRNVKLALK
>Mature_172_residues
MKNKPLGLWLMSLLVLVGCKANQDDLTSYVAQVEREARKEVTKLKPILEFEATPYQQHKGREPFVLPKEALVQNQPLAKA
DCWQPVPRAKNGPLERYPLHQLRLKGVMSSGGSISALVQTPAGSVVKVKAGQYVGINNGKVTRVDDNYLLINETLPDGLG
CWNQRNVKLALK

Specific function: Unknown

COG id: COG3168

COG function: function code NU; Tfp pilus assembly protein PilP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19085; Mature: 19085

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKPLGLWLMSLLVLVGCKANQDDLTSYVAQVEREARKEVTKLKPILEFEATPYQQHKG
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
REPFVLPKEALVQNQPLAKADCWQPVPRAKNGPLERYPLHQLRLKGVMSSGGSISALVQT
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEC
PAGSVVKVKAGQYVGINNGKVTRVDDNYLLINETLPDGLGCWNQRNVKLALK
CCCCEEEEECCCEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MKNKPLGLWLMSLLVLVGCKANQDDLTSYVAQVEREARKEVTKLKPILEFEATPYQQHKG
CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
REPFVLPKEALVQNQPLAKADCWQPVPRAKNGPLERYPLHQLRLKGVMSSGGSISALVQT
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEC
PAGSVVKVKAGQYVGINNGKVTRVDDNYLLINETLPDGLGCWNQRNVKLALK
CCCCEEEEECCCEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA