| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673269
Identifier: 147673269
GI number: 147673269
Start: 1493017
End: 1493376
Strand: Reverse
Name: 147673269
Synonym: VC0395_A1389
Alternate gene names: NA
Gene position: 1493376-1493017 (Counterclockwise)
Preceding gene: 147675221
Following gene: 147674028
Centisome position: 49.38
GC content: 42.78
Gene sequence:
>360_bases ATGGCTGTAATGACATTTAACTTAGAAGATGGTTTCAAGGTTGGGGATGCCCAATGCCATGAGGTTGGACTCAAAGAGCT AACACCTAAGGATGTTTTTGATGCTCAGCTTGCCTCAGAAAAAATTGGAATATTGAATGGTAGACCCCATGCCTACACTT CTGATGTTCAAATGGGTATGGAGCTTTTATGTCGTCAAGTGGAGTTTATTGGTAACGTACAAGGTCCATTTAGCGTCAAA GAGATTTTGAAATTGTCTTCACGCGACTTTGCCACACTACAACAAAAAGCTCGTGAGCTTGATGACATTATGTTTTCAGA TGATGCCTTGGAGGGGCTTGAGGCTCGGGGGCGAGATTAA
Upstream 100 bases:
>100_bases AAACCTTGCAATAGCAGAATACTATGCAAATCAGGCAGCGATGCTTGCCTAACGAGAGTATTGGCCTGAATGACCTCTAA TTTAAATAGGAACATGTGAA
Downstream 100 bases:
>100_bases ATCACTTGCAGCTCATTTAGAGCTAATGTTGATAAACGTAGGCTCACGCTATCCTGTAAGTGATTTCAATCATCAACCAA TTCGTAGACTTATCCAACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MAVMTFNLEDGFKVGDAQCHEVGLKELTPKDVFDAQLASEKIGILNGRPHAYTSDVQMGMELLCRQVEFIGNVQGPFSVK EILKLSSRDFATLQQKARELDDIMFSDDALEGLEARGRD
Sequences:
>Translated_119_residues MAVMTFNLEDGFKVGDAQCHEVGLKELTPKDVFDAQLASEKIGILNGRPHAYTSDVQMGMELLCRQVEFIGNVQGPFSVK EILKLSSRDFATLQQKARELDDIMFSDDALEGLEARGRD >Mature_118_residues AVMTFNLEDGFKVGDAQCHEVGLKELTPKDVFDAQLASEKIGILNGRPHAYTSDVQMGMELLCRQVEFIGNVQGPFSVKE ILKLSSRDFATLQQKARELDDIMFSDDALEGLEARGRD
Specific function: Unknown
COG id: COG4518
COG function: function code S; Mu-like prophage FluMu protein gp41
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13237; Mature: 13106
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVMTFNLEDGFKVGDAQCHEVGLKELTPKDVFDAQLASEKIGILNGRPHAYTSDVQMGM CEEEEECCCCCCCCCCCHHHHCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH ELLCRQVEFIGNVQGPFSVKEILKLSSRDFATLQQKARELDDIMFSDDALEGLEARGRD HHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC >Mature Secondary Structure AVMTFNLEDGFKVGDAQCHEVGLKELTPKDVFDAQLASEKIGILNGRPHAYTSDVQMGM EEEEECCCCCCCCCCCHHHHCCHHHCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH ELLCRQVEFIGNVQGPFSVKEILKLSSRDFATLQQKARELDDIMFSDDALEGLEARGRD HHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA