Click here to switch to the map view.

The map label for this gene is ubiX [C]

Identifier: 147673199

GI number: 147673199

Start: 2275768

End: 2276403

Strand: Reverse

Name: ubiX [C]

Synonym: VC0395_A2120

Alternate gene names: 147673199

Gene position: 2276403-2275768 (Counterclockwise)

Preceding gene: 147675374

Following gene: 147675627

Centisome position: 75.28

GC content: 54.87

Gene sequence:

>636_bases
GTGAGCATGAACAACAATCGAACCATTACACTGGCTTGGACTGGCGCTTCCGGAGCGCCTTACGGGCTGCGCTTATTGCA
ATGCTTGTTAGCGGCAGACTATCAGGTGTACCTACTGATCTCTTCGGCGGCGCGAGTGGTACTGGCGACTGAGCACGGCT
TGAAACTGCCCGCCAACCCTGAAGCGGCGCAAGCGGCTTTGGTGAAGCATCTGGGCTGCGCCAGTGATAAGTTGGTGGTG
TGTGGAAAAGAAGATTGGTTTTCGCCAGTGGCTTCCGGTTCGGCTGCCCCCAAGCAGATGGTGGTGTGTCCATGCTCGGC
AGGCAGTGTAGCCGCGATTGCTCATGGCATGTCTGATAATCTGATTGAACGCGCCGCTGATGTGGTGCTGAAAGAGCGTG
GACAACTGCTGTTGGTGGTGCGTGAAACGCCATTCTCCACTTTGCACTTAGAAAATATGCTTAAGCTCTCGCACATGGGG
GTGACTATCATGCCTGCTGCGCCGGGTTTTTATCATCAGCCACAATCGATTGACGATCTGGTCGATTTTATGGTGGCGCG
CATTCTTGATCATCTTGGCATCGAACAAGCGCTCGTACCGCGTTGGGGCTATGATCAACGCGTGCGCGGCGAGTAA

Upstream 100 bases:

>100_bases
AGAAGCCCAAGCGGGTGACCAGATTTTGGTGATGAGCAACGGTGGCTTTGAAGGCATTCATGGCAAGTTGCTCGCGGCAC
TGCAACAGAAATAATTTAAG

Downstream 100 bases:

>100_bases
TGACATGGCCAGTCGCGATTTTCCGCTACTGGCTAATTACAAGATTTCCCATTACAATCCAACCCACTCACGGGGGGCCA
CCCATTCATCCGAATGGCGC

Product: aromatic acid decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSMNNNRTITLAWTGASGAPYGLRLLQCLLAADYQVYLLISSAARVVLATEHGLKLPANPEAAQAALVKHLGCASDKLVV
CGKEDWFSPVASGSAAPKQMVVCPCSAGSVAAIAHGMSDNLIERAADVVLKERGQLLLVVRETPFSTLHLENMLKLSHMG
VTIMPAAPGFYHQPQSIDDLVDFMVARILDHLGIEQALVPRWGYDQRVRGE

Sequences:

>Translated_211_residues
MSMNNNRTITLAWTGASGAPYGLRLLQCLLAADYQVYLLISSAARVVLATEHGLKLPANPEAAQAALVKHLGCASDKLVV
CGKEDWFSPVASGSAAPKQMVVCPCSAGSVAAIAHGMSDNLIERAADVVLKERGQLLLVVRETPFSTLHLENMLKLSHMG
VTIMPAAPGFYHQPQSIDDLVDFMVARILDHLGIEQALVPRWGYDQRVRGE
>Mature_210_residues
SMNNNRTITLAWTGASGAPYGLRLLQCLLAADYQVYLLISSAARVVLATEHGLKLPANPEAAQAALVKHLGCASDKLVVC
GKEDWFSPVASGSAAPKQMVVCPCSAGSVAAIAHGMSDNLIERAADVVLKERGQLLLVVRETPFSTLHLENMLKLSHMGV
TIMPAAPGFYHQPQSIDDLVDFMVARILDHLGIEQALVPRWGYDQRVRGE

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=199, Percent_Identity=39.6984924623116, Blast_Score=132, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6320746, Length=196, Percent_Identity=40.3061224489796, Blast_Score=133, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 22731; Mature: 22599

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMNNNRTITLAWTGASGAPYGLRLLQCLLAADYQVYLLISSAARVVLATEHGLKLPANP
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCCCCCC
EAAQAALVKHLGCASDKLVVCGKEDWFSPVASGSAAPKQMVVCPCSAGSVAAIAHGMSDN
HHHHHHHHHHHCCCCCCEEEECCHHHCCHHHCCCCCCCEEEEEECCCCCHHHHHCCCCHH
LIERAADVVLKERGQLLLVVRETPFSTLHLENMLKLSHMGVTIMPAAPGFYHQPQSIDDL
HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHH
VDFMVARILDHLGIEQALVPRWGYDQRVRGE
HHHHHHHHHHHCCCHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SMNNNRTITLAWTGASGAPYGLRLLQCLLAADYQVYLLISSAARVVLATEHGLKLPANP
CCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCCCCCC
EAAQAALVKHLGCASDKLVVCGKEDWFSPVASGSAAPKQMVVCPCSAGSVAAIAHGMSDN
HHHHHHHHHHHCCCCCCEEEECCHHHCCHHHCCCCCCCEEEEEECCCCCHHHHHCCCCHH
LIERAADVVLKERGQLLLVVRETPFSTLHLENMLKLSHMGVTIMPAAPGFYHQPQSIDDL
HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHH
VDFMVARILDHLGIEQALVPRWGYDQRVRGE
HHHHHHHHHHHCCCHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]