| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673172
Identifier: 147673172
GI number: 147673172
Start: 364974
End: 365114
Strand: Reverse
Name: 147673172
Synonym: VC0395_A0342
Alternate gene names: NA
Gene position: 365114-364974 (Counterclockwise)
Preceding gene: 147673753
Following gene: 147675457
Centisome position: 12.07
GC content: 42.55
Gene sequence:
>141_bases ATGTATCGAGTGAAGCAGTTGTTAGGTGGACGATTAAGTCTGAGAAACTACAATGCTCAGGTTGGTGAGGCTTACCCGAT GATCAAAGCGTTAAATAAGATAACAGGGCTTGGTATGCCTAAAACTTGCCCTATTGGCTAA
Upstream 100 bases:
>100_bases AAAGTTGCATTTAGCGGTAGGTTGCCAGAAGCTCTACGGGTCCAACAATAAGTGGAAAAAGCGGTACGGCTATCATAAAC GCTCACTATCTGAAACAGCA
Downstream 100 bases:
>100_bases CTATCAATCTAAGTAGGTGTGTGATTCATAGAGATGGTTTCAATTTTCTTAGCTGAAGATCGAGCTTGTAATTTTGCTCT TGAAACCGCTCTTTCTTGAT
Product: putative transposase
Products: NA
Alternate protein names: Transposase; LOW QUALITY PROTEIN Transposase; Polyribonucleotide Nucleotidyltransferase
Number of amino acids: Translated: 46; Mature: 46
Protein sequence:
>46_residues MYRVKQLLGGRLSLRNYNAQVGEAYPMIKALNKITGLGMPKTCPIG
Sequences:
>Translated_46_residues MYRVKQLLGGRLSLRNYNAQVGEAYPMIKALNKITGLGMPKTCPIG >Mature_46_residues MYRVKQLLGGRLSLRNYNAQVGEAYPMIKALNKITGLGMPKTCPIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5066; Mature: 5066
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRVKQLLGGRLSLRNYNAQVGEAYPMIKALNKITGLGMPKTCPIG CCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MYRVKQLLGGRLSLRNYNAQVGEAYPMIKALNKITGLGMPKTCPIG CCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA