Definition Vibrio cholerae O395 chromosome 2, complete sequence.
Accession NC_009457
Length 3,024,069

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The map label for this gene is 147673753

Identifier: 147673753

GI number: 147673753

Start: 365436

End: 365654

Strand: Reverse

Name: 147673753

Synonym: VC0395_A0343

Alternate gene names: NA

Gene position: 365654-365436 (Counterclockwise)

Preceding gene: 147675066

Following gene: 147673172

Centisome position: 12.09

GC content: 43.84

Gene sequence:

>219_bases
ATGCCGAAACCTCGCTACAAAACAACGAATTGGAAACAGTACAACAAAGCCTTAATCAACCGTGGTTCACTCACTTTCTG
GATTGATGAAGAAGCCACTCGCCAGTGGAAGCAGAGCAAACAAGATAAACGAGGTAGACCTCGCCAGTTCAGCGACTTAG
CCATTATTACTGCGCTTATGGTGAAACGAGTTTTCTCAATGCAGTTTAGAGCATTGTAA

Upstream 100 bases:

>100_bases
AAAATAATGCCACCGTGGGCAGGCTTTGTTGCGTAATTCGAGGGAACTAAATCCGAAGGTTACGATCTGATCCGTTAAGT
AAGTTAATTCCCCTAGTCTC

Downstream 100 bases:

>100_bases
GGGTTTATCGATTCTGTTTTTTCATTGGCTAACGTCCCTATAGTCTGCCCACATTACAGTTGTATCAGTCGAAGAGCTAA
GCAAGTCGAGGTTTCATTTA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 71

Protein sequence:

>72_residues
MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALMVKRVFSMQFRAL

Sequences:

>Translated_72_residues
MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALMVKRVFSMQFRAL
>Mature_71_residues
PKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALMVKRVFSMQFRAL

Specific function: Required for transposition of transposon Tn903 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 8706; Mature: 8575

Theoretical pI: Translated: 11.66; Mature: 11.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALM
CCCCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VKRVFSMQFRAL
HHHHHHHHHHCC
>Mature Secondary Structure 
PKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALM
CCCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VKRVFSMQFRAL
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6270337; 6261245; 6271455 [H]