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The map label for this gene is rsmI

Identifier: 147673119

GI number: 147673119

Start: 102271

End: 103137

Strand: Direct

Name: rsmI

Synonym: VC0395_A0114

Alternate gene names: 147673119

Gene position: 102271-103137 (Clockwise)

Preceding gene: 147675024

Following gene: 147674548

Centisome position: 3.38

GC content: 45.56

Gene sequence:

>867_bases
ATGACAGATAATAAAACCGTGCCAAATGGTGCTCCAATTCTTTATATTGTCCCAACCCCGATTGGTAATCTGGGTGACAT
CACACAACGCGCTCTGGATGTATTAGCCAGTGTCGATATGATTGCCGTTGAAGATACGCGTCATACCGGAAAATTATTAG
CTCACTTCAACATCTCGACCAAAACGTTTGCTTTGCACGATCATAATGAGCAGCAGAAAGCCCAAGTCTTAGTGGATAAA
CTGCTCTCTGGTCTATCGATTGCCTTAGTGTCCGATGCTGGCACGCCTCTGATCAGTGATCCAGGTTATCATTTAGTCAC
TCAATGTCGTCAAGCAGGCGTTAAAGTTGTGCCACTTCCAGGGCCATGTGCGGTGATCACAGCGCTGAGTGCATCAGGCC
TGCCATCTGATAGTTTTAGCTTTGAAGGTTTTTTGCCGGCAAAAAGCAAAGCACGTAAGGATAAACTATTAGAGATCGCG
AAAGTGAGCCGTACCTGTATTTTTTATGAATCGCCACACCGGATCTGCGAGTCACTGCAAGATATGTTAGATGTACTTGG
TGGCGAGCGTGAAGTGGTACTTGCCCGTGAACTCACCAAAACCTTCGAAACAATTCAAGGTATGCCTTTGGCTGAGTTGA
TTACGTGGATTGCTGAAGATGATAACCGTAAGAAAGGCGAAATGGTGCTGTTGGTGCATGGATATCGGGATGCGGGTGAG
CAGCAACTGCCAGATGAGGCTCTACGCACCTTAACGATTTTGACTAAAGAGCTGCCATTGAAAAAAGCTGCTGCCTTAGT
GGCTGAAATTCACCAGTTGAAAAAGAATGCATTGTATAAATGGGGCTTGGAGAATTTAGGCGAATAA

Upstream 100 bases:

>100_bases
GTGGTACACTGCGTCGCTGATGGTGGTTCATAGCCATGAGTTCTTTCGTTAGTCCGTGTAAAATTGTCTCTATATTAATC
GTTGATGTGATGGTAAACAA

Downstream 100 bases:

>100_bases
TTTTCTCTTCTATCCATTTCCTACTTGAAGCTGTAGCGGTGTTGGCAGAATTTGCTCACCCCAATCACAGAGTGTATCTA
TGCTCGTGGGGATTCACTCA

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI

Number of amino acids: Translated: 288; Mature: 287

Protein sequence:

>288_residues
MTDNKTVPNGAPILYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNISTKTFALHDHNEQQKAQVLVDK
LLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLPGPCAVITALSASGLPSDSFSFEGFLPAKSKARKDKLLEIA
KVSRTCIFYESPHRICESLQDMLDVLGGEREVVLARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDAGE
QQLPDEALRTLTILTKELPLKKAAALVAEIHQLKKNALYKWGLENLGE

Sequences:

>Translated_288_residues
MTDNKTVPNGAPILYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNISTKTFALHDHNEQQKAQVLVDK
LLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLPGPCAVITALSASGLPSDSFSFEGFLPAKSKARKDKLLEIA
KVSRTCIFYESPHRICESLQDMLDVLGGEREVVLARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDAGE
QQLPDEALRTLTILTKELPLKKAAALVAEIHQLKKNALYKWGLENLGE
>Mature_287_residues
TDNKTVPNGAPILYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNISTKTFALHDHNEQQKAQVLVDKL
LSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLPGPCAVITALSASGLPSDSFSFEGFLPAKSKARKDKLLEIAK
VSRTCIFYESPHRICESLQDMLDVLGGEREVVLARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDAGEQ
QLPDEALRTLTILTKELPLKKAAALVAEIHQLKKNALYKWGLENLGE

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family

Homologues:

Organism=Escherichia coli, GI1789535, Length=287, Percent_Identity=66.5505226480836, Blast_Score=376, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMI_VIBCH (Q9KUD9)

Other databases:

- EMBL:   AE003852
- PIR:   C82306
- RefSeq:   NP_230233.1
- ProteinModelPortal:   Q9KUD9
- SMR:   Q9KUD9
- GeneID:   2615370
- GenomeReviews:   AE003852_GR
- KEGG:   vch:VC0582
- TIGR:   VC_0582
- HOGENOM:   HBG529058
- OMA:   ASDRFCF
- ProtClustDB:   CLSK874019
- GO:   GO:0005737
- HAMAP:   MF_01877
- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063
- Gene3D:   G3DSA:3.40.1010.10
- TIGRFAMs:   TIGR00096

Pfam domain/function: PF00590 TP_methylase; SSF53790 Cor/por_Metransf

EC number: NA

Molecular weight: Translated: 31465; Mature: 31334

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS01296 RSMI

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNKTVPNGAPILYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNIST
CCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCC
KTFALHDHNEQQKAQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLP
EEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEECC
GPCAVITALSASGLPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQ
CCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHH
DMLDVLGGEREVVLARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDAGE
HHHHHHCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
QQLPDEALRTLTILTKELPLKKAAALVAEIHQLKKNALYKWGLENLGE
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCC
>Mature Secondary Structure 
TDNKTVPNGAPILYIVPTPIGNLGDITQRALDVLASVDMIAVEDTRHTGKLLAHFNIST
CCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCC
KTFALHDHNEQQKAQVLVDKLLSGLSIALVSDAGTPLISDPGYHLVTQCRQAGVKVVPLP
EEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEECC
GPCAVITALSASGLPSDSFSFEGFLPAKSKARKDKLLEIAKVSRTCIFYESPHRICESLQ
CCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHH
DMLDVLGGEREVVLARELTKTFETIQGMPLAELITWIAEDDNRKKGEMVLLVHGYRDAGE
HHHHHHCCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
QQLPDEALRTLTILTKELPLKKAAALVAEIHQLKKNALYKWGLENLGE
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301