| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673091
Identifier: 147673091
GI number: 147673091
Start: 1320215
End: 1320616
Strand: Reverse
Name: 147673091
Synonym: VC0395_A1248
Alternate gene names: NA
Gene position: 1320616-1320215 (Counterclockwise)
Preceding gene: 147674141
Following gene: 147673935
Centisome position: 43.67
GC content: 48.01
Gene sequence:
>402_bases ATGCCAACAACCGATCAAGCGATAGCCATTACTTTGCCTTCTTTGATTCATCGTATAGGTAGCGATACCGTTAAGCGATT GAAACTGCAGGCACAGACTTTTGATTGCGAGTTAAAGCGTATTCGTCGCTCGCGAAATTGGCAGTTATTAGGTGAAGCGG CCTCGATGCAGAAATTTGTTATCCAAATCAAGCAGACCGAATATCAAGTTGCTGAATATCTGATTCGACGCGTGGAAGCC GGTTTAAGGCTGCCGAGCGACAAGATCGAACCCATCGAAGTCCAGCTGCAGCGTTTAGTTCAGCAAAATCCGTCCATAAC CTTAGCGGAACTCATGGCAGCTACACATTGCAGCTTGATGCAGGCGCGAGCGGCTCGTTTTGCTGAGGAGAGCTTTGAGT GA
Upstream 100 bases:
>100_bases CTGTTATAAAATACCCATTGAATGCTCTTGGTATATTGATGTTAATTATCATCACTATCCAGAACGTATTTGAGAGAACC TTAATAACTGGAGTGGAGAG
Downstream 100 bases:
>100_bases CCTTTTTGATGAAGTAAGATTAAGTAGAATCTTTGCTTTATGTGTCGAATATAACTAGTCTTTAATGAGTCTATAATTAA GGCATAGTCAAATGCATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MPTTDQAIAITLPSLIHRIGSDTVKRLKLQAQTFDCELKRIRRSRNWQLLGEAASMQKFVIQIKQTEYQVAEYLIRRVEA GLRLPSDKIEPIEVQLQRLVQQNPSITLAELMAATHCSLMQARAARFAEESFE
Sequences:
>Translated_133_residues MPTTDQAIAITLPSLIHRIGSDTVKRLKLQAQTFDCELKRIRRSRNWQLLGEAASMQKFVIQIKQTEYQVAEYLIRRVEA GLRLPSDKIEPIEVQLQRLVQQNPSITLAELMAATHCSLMQARAARFAEESFE >Mature_132_residues PTTDQAIAITLPSLIHRIGSDTVKRLKLQAQTFDCELKRIRRSRNWQLLGEAASMQKFVIQIKQTEYQVAEYLIRRVEAG LRLPSDKIEPIEVQLQRLVQQNPSITLAELMAATHCSLMQARAARFAEESFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15237; Mature: 15106
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS00221 MIP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTDQAIAITLPSLIHRIGSDTVKRLKLQAQTFDCELKRIRRSRNWQLLGEAASMQKFV CCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IQIKQTEYQVAEYLIRRVEAGLRLPSDKIEPIEVQLQRLVQQNPSITLAELMAATHCSLM HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH QARAARFAEESFE HHHHHHHHHHCCC >Mature Secondary Structure PTTDQAIAITLPSLIHRIGSDTVKRLKLQAQTFDCELKRIRRSRNWQLLGEAASMQKFV CCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH IQIKQTEYQVAEYLIRRVEAGLRLPSDKIEPIEVQLQRLVQQNPSITLAELMAATHCSLM HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH QARAARFAEESFE HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA