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The map label for this gene is yciS [H]

Identifier: 147673081

GI number: 147673081

Start: 1615930

End: 1616211

Strand: Reverse

Name: yciS [H]

Synonym: VC0395_A1503

Alternate gene names: 147673081

Gene position: 1616211-1615930 (Counterclockwise)

Preceding gene: 147673848

Following gene: 147675765

Centisome position: 53.44

GC content: 41.49

Gene sequence:

>282_bases
ATGAAAATTATAAAGATAGTCGCCGTACTCGCTCTTTTCTTAATCGCATTAGCATTAGGCTCGCAAAACCAATCGGTTGT
GGTATTTAACTACTTGCTAGCGCAAGGTGAGTTTCATTTATCGACCTTACTGGGTACGGTTTTTATTGTCGGCTTTGCTT
GTGCAGCGATTCTTTTCGGTGGCATGCATTTCAAGTCGCAACTGAGAATTCGCAAACTTACCAAACAGTTAAAATTGGCC
AATCAGCAATCCGCACCTGAAACGAAAGTACATAGCGGATAA

Upstream 100 bases:

>100_bases
CAGCGTGCCGCTTTTTTATATCAGCATGACTATTAGCCGTGGTTTGTCGCGCCGTTTTCCTGCATAATCGGTGTGCCAAT
TTGTGAAAAGGTAATGACTT

Downstream 100 bases:

>100_bases
GGCTGTTTTCGATGTTAGAAATACTGTTCCTGTTATTGCCCATCGCTGCCGCCTACGGCTGGTACATGGGGCATCGTAGC
GCCCAGCAAGATAAACAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MKIIKIVAVLALFLIALALGSQNQSVVVFNYLLAQGEFHLSTLLGTVFIVGFACAAILFGGMHFKSQLRIRKLTKQLKLA
NQQSAPETKVHSG

Sequences:

>Translated_93_residues
MKIIKIVAVLALFLIALALGSQNQSVVVFNYLLAQGEFHLSTLLGTVFIVGFACAAILFGGMHFKSQLRIRKLTKQLKLA
NQQSAPETKVHSG
>Mature_93_residues
MKIIKIVAVLALFLIALALGSQNQSVVVFNYLLAQGEFHLSTLLGTVFIVGFACAAILFGGMHFKSQLRIRKLTKQLKLA
NQQSAPETKVHSG

Specific function: Unknown

COG id: COG3771

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1222 [H]

Homologues:

Organism=Escherichia coli, GI1787535, Length=82, Percent_Identity=40.2439024390244, Blast_Score=69, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010445 [H]

Pfam domain/function: PF06305 DUF1049 [H]

EC number: NA

Molecular weight: Translated: 10112; Mature: 10112

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIKIVAVLALFLIALALGSQNQSVVVFNYLLAQGEFHLSTLLGTVFIVGFACAAILFG
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
GMHFKSQLRIRKLTKQLKLANQQSAPETKVHSG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKIIKIVAVLALFLIALALGSQNQSVVVFNYLLAQGEFHLSTLLGTVFIVGFACAAILFG
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
GMHFKSQLRIRKLTKQLKLANQQSAPETKVHSG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]