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The map label for this gene is yciM [H]

Identifier: 147675765

GI number: 147675765

Start: 1614749

End: 1615918

Strand: Reverse

Name: yciM [H]

Synonym: VC0395_A1502

Alternate gene names: 147675765

Gene position: 1615918-1614749 (Counterclockwise)

Preceding gene: 147673081

Following gene: 147674982

Centisome position: 53.44

GC content: 45.47

Gene sequence:

>1170_bases
ATGTTAGAAATACTGTTCCTGTTATTGCCCATCGCTGCCGCCTACGGCTGGTACATGGGGCATCGTAGCGCCCAGCAAGA
TAAACAGAAACAATCACACCAAATTTCGCGTCAATACGTGACCGGTTTGAACCTCTTACTCTCCGATCAATCGGATAAAG
CGGTTGATCACTTTATCGAATTACTGCAAGTCGATAATGAAACCATTGATACCCATCTAGCACTCGGTAACCTTTTCCGG
TCTCGTGGCGAAGTGGATCGCGCTATTCGTATTCACCAAAACCTTATCTCTCGCTCTGGGTTGACCATAGACCAGAAAAA
CTTGGCGCTGCAGCAGTTAGCTAAGGACTATATGGTGTCCGGTTTTCTTGATCGTGCTGAGAAAATATTTGAACAACTGA
TTGATGAGCCTGAGCATCGTGAATCTGCTCTCCAGCAGCTCACGGCAATTTATCAACAGACTCGTGAGTGGCACAAAGCG
ATTGAGTGTGCCACCGCTTTGGTTAAGCTTGGGCGCAAACGTATGAAGGTGAACATTGCGCATTTCTACTGCGAGCTGGC
CATGCTTGAAAAGGCGGACAGTAACGATAACAAAGCCATTCAACTGTTTAAAAAAGCATTACAAGAAGATCCGAAATGTG
TACGTGCAACCATTTCACTCGGTAAACTCTACCTACAAAACGAAGACTATCAGAAGACTATTGACCATCTAGAGATGGTT
CTTGAGCAAGATATCGATTTTATCGGTGAAGTGCTCAATACGTTGGCTGAGTGTTACCACCATTTGGGGCGAGAGCAAGA
TTTGATCACCTTCTTACGTCGCTGTATCGCCAATAAAGCGGGGGTATCGGCCGAATTAATGCTCGCTCAGCTGGTTGCAC
AGCATGAAGGTATTGCCGCTGCACAAGAGATTTTAACTCGTCAGTTGGTTAAAAATCCTACTATGAAAGGCTTTTACCGG
TTGATTGATTACCATATTGCCGAAGCGGAAGAGGGCAGAGCCAAAGCCAGTCTCTCTACGTTACAACGCTTAGTGGGTGA
ACAGCTTAAAGTAAAACCCCATTACCGTTGCCGTAAATGTGGCTTTTCGACCCATTCACTTTATTGGCATTGCCCATCAT
GTAAAAACTGGGGTTCAATCAAGCCAATCAGAGGCTTAGATGGTGAGTAA

Upstream 100 bases:

>100_bases
AGTCGCAACTGAGAATTCGCAAACTTACCAAACAGTTAAAATTGGCCAATCAGCAATCCGCACCTGAAACGAAAGTACAT
AGCGGATAAGGCTGTTTTCG

Downstream 100 bases:

>100_bases
TTAAAAATCAACAGTATGACGCAGCTATTTATGGCTGCTTTTTTTTAACTCGATATACAGATAGGAGAAACGATGAACGA
CCCAAAAGTGATTGTTGCAC

Product: tetratricopeptide repeat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MLEILFLLLPIAAAYGWYMGHRSAQQDKQKQSHQISRQYVTGLNLLLSDQSDKAVDHFIELLQVDNETIDTHLALGNLFR
SRGEVDRAIRIHQNLISRSGLTIDQKNLALQQLAKDYMVSGFLDRAEKIFEQLIDEPEHRESALQQLTAIYQQTREWHKA
IECATALVKLGRKRMKVNIAHFYCELAMLEKADSNDNKAIQLFKKALQEDPKCVRATISLGKLYLQNEDYQKTIDHLEMV
LEQDIDFIGEVLNTLAECYHHLGREQDLITFLRRCIANKAGVSAELMLAQLVAQHEGIAAAQEILTRQLVKNPTMKGFYR
LIDYHIAEAEEGRAKASLSTLQRLVGEQLKVKPHYRCRKCGFSTHSLYWHCPSCKNWGSIKPIRGLDGE

Sequences:

>Translated_389_residues
MLEILFLLLPIAAAYGWYMGHRSAQQDKQKQSHQISRQYVTGLNLLLSDQSDKAVDHFIELLQVDNETIDTHLALGNLFR
SRGEVDRAIRIHQNLISRSGLTIDQKNLALQQLAKDYMVSGFLDRAEKIFEQLIDEPEHRESALQQLTAIYQQTREWHKA
IECATALVKLGRKRMKVNIAHFYCELAMLEKADSNDNKAIQLFKKALQEDPKCVRATISLGKLYLQNEDYQKTIDHLEMV
LEQDIDFIGEVLNTLAECYHHLGREQDLITFLRRCIANKAGVSAELMLAQLVAQHEGIAAAQEILTRQLVKNPTMKGFYR
LIDYHIAEAEEGRAKASLSTLQRLVGEQLKVKPHYRCRKCGFSTHSLYWHCPSCKNWGSIKPIRGLDGE
>Mature_389_residues
MLEILFLLLPIAAAYGWYMGHRSAQQDKQKQSHQISRQYVTGLNLLLSDQSDKAVDHFIELLQVDNETIDTHLALGNLFR
SRGEVDRAIRIHQNLISRSGLTIDQKNLALQQLAKDYMVSGFLDRAEKIFEQLIDEPEHRESALQQLTAIYQQTREWHKA
IECATALVKLGRKRMKVNIAHFYCELAMLEKADSNDNKAIQLFKKALQEDPKCVRATISLGKLYLQNEDYQKTIDHLEMV
LEQDIDFIGEVLNTLAECYHHLGREQDLITFLRRCIANKAGVSAELMLAQLVAQHEGIAAAQEILTRQLVKNPTMKGFYR
LIDYHIAEAEEGRAKASLSTLQRLVGEQLKVKPHYRCRKCGFSTHSLYWHCPSCKNWGSIKPIRGLDGE

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=379, Percent_Identity=52.5065963060686, Blast_Score=439, Evalue=1e-124,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44554; Mature: 44554

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEILFLLLPIAAAYGWYMGHRSAQQDKQKQSHQISRQYVTGLNLLLSDQSDKAVDHFIE
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LLQVDNETIDTHLALGNLFRSRGEVDRAIRIHQNLISRSGLTIDQKNLALQQLAKDYMVS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
GFLDRAEKIFEQLIDEPEHRESALQQLTAIYQQTREWHKAIECATALVKLGRKRMKVNIA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFYCELAMLEKADSNDNKAIQLFKKALQEDPKCVRATISLGKLYLQNEDYQKTIDHLEMV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LEQDIDFIGEVLNTLAECYHHLGREQDLITFLRRCIANKAGVSAELMLAQLVAQHEGIAA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHH
AQEILTRQLVKNPTMKGFYRLIDYHIAEAEEGRAKASLSTLQRLVGEQLKVKPHYRCRKC
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHC
GFSTHSLYWHCPSCKNWGSIKPIRGLDGE
CCCCCCEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLEILFLLLPIAAAYGWYMGHRSAQQDKQKQSHQISRQYVTGLNLLLSDQSDKAVDHFIE
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
LLQVDNETIDTHLALGNLFRSRGEVDRAIRIHQNLISRSGLTIDQKNLALQQLAKDYMVS
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
GFLDRAEKIFEQLIDEPEHRESALQQLTAIYQQTREWHKAIECATALVKLGRKRMKVNIA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFYCELAMLEKADSNDNKAIQLFKKALQEDPKCVRATISLGKLYLQNEDYQKTIDHLEMV
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LEQDIDFIGEVLNTLAECYHHLGREQDLITFLRRCIANKAGVSAELMLAQLVAQHEGIAA
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHH
AQEILTRQLVKNPTMKGFYRLIDYHIAEAEEGRAKASLSTLQRLVGEQLKVKPHYRCRKC
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHC
GFSTHSLYWHCPSCKNWGSIKPIRGLDGE
CCCCCCEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]