| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is yqiA [H]
Identifier: 147673053
GI number: 147673053
Start: 2160990
End: 2161577
Strand: Reverse
Name: yqiA [H]
Synonym: VC0395_A2009
Alternate gene names: 147673053
Gene position: 2161577-2160990 (Counterclockwise)
Preceding gene: 147675382
Following gene: 147674220
Centisome position: 71.48
GC content: 49.49
Gene sequence:
>588_bases ATGACTGCTCGTCCAGCTTTGCTGCTCTACATCCATGGTTTTAACAGCTCACCGTTGTCACACAAAGCGCAAGTGATGCA GCAGTATTGCCAGCAGCACAGGCCTGATATCAAAGTCGTGGTGCCCAAGTTACCGAGCTTTCCTGCGCAAGCGGCGCAGC ATCTGTTGTCTGTCGTGGAGCAATATCGCGCGCAATATCGGATCGGGTTGGTCGGCAGTTCATTAGGCGGTTATCTCTCC ACTTGGTTAAATGCCCAATTTGGCTTTCGCGCGGTACTGATCAATCCTGCTGTGAAGCCTTACGAGTTATTAGCCGATTT TCTCGGTGAGCAGGTTAATCCTTACACCCAAGAGCATTACGTGCTCGAAGCGTGTCATATTGATGAGTTGAAAGCGCTCG ATACGCCAGTGCTGAAACAGCCAAGCGATTTTTGGCTACTGCAGCAAAAAGGCGATGAAGTGCTGGATTATCGACAAGCG GTTGAGAAGTACCAAGCAGCTAAACTGACCGTGGAAGAGGGCGGTGACCACAGTTTTGTGGATTTTGAACGTTACCCAGA GCAGATTATTCACTTCCTTGAACTTTGA
Upstream 100 bases:
>100_bases CGTGAATTAACCCTTCACGCGGATGGGCAAGTGAGCACCCAAGTGAAGCGACTTAAACAAGGCCGATTTTTACCTGATTT TAACTCGAACGGATACTGAT
Downstream 100 bases:
>100_bases TTGATGACTGACTTTTGTTGTTTTCGGATTCAATCTGCGTTTTGCTGCGCAAAGCCTCATAAATTTACCTGATCCTTGCG CTGTGCCCTTGACATCAGAG
Product: esterase YqiA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MTARPALLLYIHGFNSSPLSHKAQVMQQYCQQHRPDIKVVVPKLPSFPAQAAQHLLSVVEQYRAQYRIGLVGSSLGGYLS TWLNAQFGFRAVLINPAVKPYELLADFLGEQVNPYTQEHYVLEACHIDELKALDTPVLKQPSDFWLLQQKGDEVLDYRQA VEKYQAAKLTVEEGGDHSFVDFERYPEQIIHFLEL
Sequences:
>Translated_195_residues MTARPALLLYIHGFNSSPLSHKAQVMQQYCQQHRPDIKVVVPKLPSFPAQAAQHLLSVVEQYRAQYRIGLVGSSLGGYLS TWLNAQFGFRAVLINPAVKPYELLADFLGEQVNPYTQEHYVLEACHIDELKALDTPVLKQPSDFWLLQQKGDEVLDYRQA VEKYQAAKLTVEEGGDHSFVDFERYPEQIIHFLEL >Mature_194_residues TARPALLLYIHGFNSSPLSHKAQVMQQYCQQHRPDIKVVVPKLPSFPAQAAQHLLSVVEQYRAQYRIGLVGSSLGGYLST WLNAQFGFRAVLINPAVKPYELLADFLGEQVNPYTQEHYVLEACHIDELKALDTPVLKQPSDFWLLQQKGDEVLDYRQAV EKYQAAKLTVEEGGDHSFVDFERYPEQIIHFLEL
Specific function: Displays esterase activity toward palmitoyl-CoA and pNP- butyrate [H]
COG id: COG3150
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789409, Length=190, Percent_Identity=50.5263157894737, Blast_Score=200, Evalue=5e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008886 [H]
Pfam domain/function: PF05728 UPF0227 [H]
EC number: NA
Molecular weight: Translated: 22257; Mature: 22125
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARPALLLYIHGFNSSPLSHKAQVMQQYCQQHRPDIKVVVPKLPSFPAQAAQHLLSVVE CCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHH QYRAQYRIGLVGSSLGGYLSTWLNAQFGFRAVLINPAVKPYELLADFLGEQVNPYTQEHY HHHHHHHHEEECCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCHHHH VLEACHIDELKALDTPVLKQPSDFWLLQQKGDEVLDYRQAVEKYQAAKLTVEEGGDHSFV HHHHHCHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCC DFERYPEQIIHFLEL CHHHHHHHHHHHHCC >Mature Secondary Structure TARPALLLYIHGFNSSPLSHKAQVMQQYCQQHRPDIKVVVPKLPSFPAQAAQHLLSVVE CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHH QYRAQYRIGLVGSSLGGYLSTWLNAQFGFRAVLINPAVKPYELLADFLGEQVNPYTQEHY HHHHHHHHEEECCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCHHHH VLEACHIDELKALDTPVLKQPSDFWLLQQKGDEVLDYRQAVEKYQAAKLTVEEGGDHSFV HHHHHCHHHHHHCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHEEEEECCCCCCCC DFERYPEQIIHFLEL CHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]