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The map label for this gene is 146343731

Identifier: 146343731

GI number: 146343731

Start: 7270256

End: 7271845

Strand: Reverse

Name: 146343731

Synonym: BRADO6978

Alternate gene names: NA

Gene position: 7271845-7270256 (Counterclockwise)

Preceding gene: 146343733

Following gene: 146343730

Centisome position: 97.52

GC content: 68.24

Gene sequence:

>1590_bases
ATGTCGCCGCGGCGCAAGCTGGACGGCGCCTGTTTGCTGGACCGCTGGACCGCCATCGTGATGACTTTCCGCCTGCTGTT
TCTGCTCGCCTTGACGGTCTCTGTCGCCACGTCGGTCGGAGTCTCCCGGCCCGCGCACGCGGCCGGCGACCGCTTCGCTC
TCGTCGTCGGCAATGCCAAATATCCCGATGCCGATGCGCCGTTGAAGGAACCGATCAACGACGCGCGCGATCTCACCGAC
GAATTGAAGCGTGACGGATTCACCGTCGAGACGCTGGAGAACGCCTCGGGCGATACGATGCGCCGCGCGCTCGAGCGGCT
CTATGGCAAGATCAAGCCGGGCTCGGTGGCGCTGCTGTTCTTCTCCGGCTACGGCATCCAGTCGAGCCGCACCAGCTACA
TGATTCCCGTCGACGCGCAGATCTGGCAGGAGGCCGACGTGCGCCGCGACGGCATCAGCCTCGAGCAGGTGCTGCAGGAG
ATCAACAGCCGCGGCGCCGGTGTGAAGATCGCGCTGCTCGATGCCTCCCGCCGCAATCCCTATGAGCGCCGTTTCCGGAC
CGCCTCCTCGGGACTCGCGCCGGTGATCGCACCGAGCGGTACCCTGGTCATGTATTCCGCCGCGTTGTCCTCGGTCGTGT
CCGATACCGGCCGCGACCGCAGCCTGTTCGTGCAGGAGCTTCTGAAGGAGATTCGCGTCCCCGACCTCACGGCCGAGGAG
ACGCTGAACCGGACCCGGGTCGGCGTGACCCGCGCCTCGCGCAGCGAGCAGGTGCCGTGGATCTCTTCGTCGCTGGCGGA
GGATTTTTCGTTCGTACCGGGCACAGGGGGCGGGCGCCCCACCGTGACGGCCGACAACACGCCGCAGCCGACACCCACGC
CAACCCTGACGCCGTCTCCGTCGCCGACACTCCAGCCGCCAGCGCCGCCGCTGCCTCCGCCGCCTCCACCTTCGCCGCCG
CCACCTGCGCCGCCGCCGTCCCCGCCGTCGCCTCCCAAGGCGGAGCTGGTGCCGCCGCTGCCGCCCGTCCCGCCGGTACC
CTCGCCCGCGCCGACCAATACCCCGACCGCCAATGTGCCGGCTGATCCGCTGGCCGAGGATCCGACCATCAAGAGCCTGA
CCGCCAAGATCGCGGCCAATCCGGATGACGCGGCCGCGCTGTACCGGCGTGGCCAGGTCTATGCCAGCAAGGGCGCCTAT
CCGCAGGCGATCCGAGATTTCGACGAGAGCATCCGGGTCAACCCGAAGGACGTCGAGGCGCTGAACAACCGCTGCTGGGC
CCGCACCGTGGTTGGCGAGCTGCAGGCGGCGCTGCGCGACTGCAACGAGGCGCTGCGGCTGCGGCCGAATTTCGTCGACG
CGCTCGACAGCCGTGGCCTGGTCAACCTCAAGAGCGGCGCGAACAAGAACGCCATCGCCGATTTCGACGCGGCCCTGAAG
ATCAATCCGCGGCTGACGTCATCCCTTTATGGACGCGGCCTCGCCAAGCAGCGCAACGGCGCCGCGCAGGAGGGCGCGCT
CGACATCGCCAATGCCAAGGCGATGGATCCAAACATCGTCCGTGAGTTCGAAAACTACGGCGTGCGCTGA

Upstream 100 bases:

>100_bases
GATGCTTTCGCCGGCGATGGCCGCTCGCGACGATTCTTCAACTGCGGCAAGCGGTTGACGTGTCGTCACGGCGATTTGAT
AATGCCTGACGCGTGGGATA

Downstream 100 bases:

>100_bases
ATTTTTGCGTCCGCGCGCGTGCCGGCTCGAACCGTCAGGCGCGCCGGATCGACATAACCGCGAACAGCTGAAGTCGCGAG
CGGGCGTTCGCGGCGAGGTG

Product: caspase-like domain-containing protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat-Containing Protein; Caspase Domain Protein; Caspase-Like Domain- And TPR Repeat-Containing Peptidase; Peptidase C; TPR Repeat-Containing Serine/Threonin Protein Kinase; Caspase-Like Domain-Containing Protein; Peptidase Protein; Tetratricopeptide Repeat Family; Caspase Domain-Containing Protein; TPR Repeat-Containing Caspace; TPR Repeat-Containing ; TPR Domain Protein; GUN4-Like Family; TPR Repeats Containing Protein; Caspase; Pentapeptide Repeat-Containing Serine/Threonine Kinase; Mitochondrial Outer Membrane; Tfp Pilus Assembly Protein PilF; TPR Repeat-Containing Protein Kinase; Peptidylprolyl Isomerase; Caspase-1 P; ICE-Like Protease

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MSPRRKLDGACLLDRWTAIVMTFRLLFLLALTVSVATSVGVSRPAHAAGDRFALVVGNAKYPDADAPLKEPINDARDLTD
ELKRDGFTVETLENASGDTMRRALERLYGKIKPGSVALLFFSGYGIQSSRTSYMIPVDAQIWQEADVRRDGISLEQVLQE
INSRGAGVKIALLDASRRNPYERRFRTASSGLAPVIAPSGTLVMYSAALSSVVSDTGRDRSLFVQELLKEIRVPDLTAEE
TLNRTRVGVTRASRSEQVPWISSSLAEDFSFVPGTGGGRPTVTADNTPQPTPTPTLTPSPSPTLQPPAPPLPPPPPPSPP
PPAPPPSPPSPPKAELVPPLPPVPPVPSPAPTNTPTANVPADPLAEDPTIKSLTAKIAANPDDAAALYRRGQVYASKGAY
PQAIRDFDESIRVNPKDVEALNNRCWARTVVGELQAALRDCNEALRLRPNFVDALDSRGLVNLKSGANKNAIADFDAALK
INPRLTSSLYGRGLAKQRNGAAQEGALDIANAKAMDPNIVREFENYGVR

Sequences:

>Translated_529_residues
MSPRRKLDGACLLDRWTAIVMTFRLLFLLALTVSVATSVGVSRPAHAAGDRFALVVGNAKYPDADAPLKEPINDARDLTD
ELKRDGFTVETLENASGDTMRRALERLYGKIKPGSVALLFFSGYGIQSSRTSYMIPVDAQIWQEADVRRDGISLEQVLQE
INSRGAGVKIALLDASRRNPYERRFRTASSGLAPVIAPSGTLVMYSAALSSVVSDTGRDRSLFVQELLKEIRVPDLTAEE
TLNRTRVGVTRASRSEQVPWISSSLAEDFSFVPGTGGGRPTVTADNTPQPTPTPTLTPSPSPTLQPPAPPLPPPPPPSPP
PPAPPPSPPSPPKAELVPPLPPVPPVPSPAPTNTPTANVPADPLAEDPTIKSLTAKIAANPDDAAALYRRGQVYASKGAY
PQAIRDFDESIRVNPKDVEALNNRCWARTVVGELQAALRDCNEALRLRPNFVDALDSRGLVNLKSGANKNAIADFDAALK
INPRLTSSLYGRGLAKQRNGAAQEGALDIANAKAMDPNIVREFENYGVR
>Mature_528_residues
SPRRKLDGACLLDRWTAIVMTFRLLFLLALTVSVATSVGVSRPAHAAGDRFALVVGNAKYPDADAPLKEPINDARDLTDE
LKRDGFTVETLENASGDTMRRALERLYGKIKPGSVALLFFSGYGIQSSRTSYMIPVDAQIWQEADVRRDGISLEQVLQEI
NSRGAGVKIALLDASRRNPYERRFRTASSGLAPVIAPSGTLVMYSAALSSVVSDTGRDRSLFVQELLKEIRVPDLTAEET
LNRTRVGVTRASRSEQVPWISSSLAEDFSFVPGTGGGRPTVTADNTPQPTPTPTLTPSPSPTLQPPAPPLPPPPPPSPPP
PAPPPSPPSPPKAELVPPLPPVPPVPSPAPTNTPTANVPADPLAEDPTIKSLTAKIAANPDDAAALYRRGQVYASKGAYP
QAIRDFDESIRVNPKDVEALNNRCWARTVVGELQAALRDCNEALRLRPNFVDALDSRGLVNLKSGANKNAIADFDAALKI
NPRLTSSLYGRGLAKQRNGAAQEGALDIANAKAMDPNIVREFENYGVR

Specific function: Unknown

COG id: COG4249

COG function: function code R; Uncharacterized protein containing caspase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56782; Mature: 56651

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRRKLDGACLLDRWTAIVMTFRLLFLLALTVSVATSVGVSRPAHAAGDRFALVVGNAK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
YPDADAPLKEPINDARDLTDELKRDGFTVETLENASGDTMRRALERLYGKIKPGSVALLF
CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEE
FSGYGIQSSRTSYMIPVDAQIWQEADVRRDGISLEQVLQEINSRGAGVKIALLDASRRNP
EECCCCCCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCH
YERRFRTASSGLAPVIAPSGTLVMYSAALSSVVSDTGRDRSLFVQELLKEIRVPDLTAEE
HHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHH
TLNRTRVGVTRASRSEQVPWISSSLAEDFSFVPGTGGGRPTVTADNTPQPTPTPTLTPSP
HHHHHHHHHECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC
SPTLQPPAPPLPPPPPPSPPPPAPPPSPPSPPKAELVPPLPPVPPVPSPAPTNTPTANVP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ADPLAEDPTIKSLTAKIAANPDDAAALYRRGQVYASKGAYPQAIRDFDESIRVNPKDVEA
CCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCHHHHHH
LNNRCWARTVVGELQAALRDCNEALRLRPNFVDALDSRGLVNLKSGANKNAIADFDAALK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEECCCCCCCCEECCCCEEE
INPRLTSSLYGRGLAKQRNGAAQEGALDIANAKAMDPNIVREFENYGVR
ECCHHHHHHHHCCHHHHCCCCCCCCCEECCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SPRRKLDGACLLDRWTAIVMTFRLLFLLALTVSVATSVGVSRPAHAAGDRFALVVGNAK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCC
YPDADAPLKEPINDARDLTDELKRDGFTVETLENASGDTMRRALERLYGKIKPGSVALLF
CCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEE
FSGYGIQSSRTSYMIPVDAQIWQEADVRRDGISLEQVLQEINSRGAGVKIALLDASRRNP
EECCCCCCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCH
YERRFRTASSGLAPVIAPSGTLVMYSAALSSVVSDTGRDRSLFVQELLKEIRVPDLTAEE
HHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHH
TLNRTRVGVTRASRSEQVPWISSSLAEDFSFVPGTGGGRPTVTADNTPQPTPTPTLTPSP
HHHHHHHHHECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC
SPTLQPPAPPLPPPPPPSPPPPAPPPSPPSPPKAELVPPLPPVPPVPSPAPTNTPTANVP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ADPLAEDPTIKSLTAKIAANPDDAAALYRRGQVYASKGAYPQAIRDFDESIRVNPKDVEA
CCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCEEECCCCCHHHHHHHHHHCCCCHHHHHH
LNNRCWARTVVGELQAALRDCNEALRLRPNFVDALDSRGLVNLKSGANKNAIADFDAALK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEECCCCCCCCEECCCCEEE
INPRLTSSLYGRGLAKQRNGAAQEGALDIANAKAMDPNIVREFENYGVR
ECCHHHHHHHHCCHHHHCCCCCCCCCEECCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA