| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is mtnA [H]
Identifier: 146343661
GI number: 146343661
Start: 7174136
End: 7175242
Strand: Reverse
Name: mtnA [H]
Synonym: BRADO6903
Alternate gene names: 146343661
Gene position: 7175242-7174136 (Counterclockwise)
Preceding gene: 146343662
Following gene: 146343659
Centisome position: 96.23
GC content: 68.65
Gene sequence:
>1107_bases ATGAAGGTGGACGGCAAGCATTATCGCAGCATATGGCTCGATGCCGACGGCTGGACGGTCTGTGCGATCGATCAGCGGCG GCTGCCGCACGAGTTCGTGGTCGCGCAGATCACCACCTGCGAGGAGGCGGCGGATGCCATCCGCCACATGCTGGTGCGCG GCGCGCCGCTGATCGGCGCTACTGCGGCGTTCGGCATGGCGCTGGCGATGCGCGACGACCGCTCCGATCCCGGCATCGAG CGCGCCTATGAGATGCTGATCGCGACACGGCCGACCGCGATCAATCTGAAATGGGCGCTCGATACGATGGCCACGATGCT GCGCCGCCTCGCGCCGTCGGAGCGGCGGGATGCGGCGTATTCGCGCGCGGTGGACATCGCCGGCGAGGACGTCACGATCA ACCAGGGCATCGCCGCACATGGTCTCGCGCTGATCGAAGCGGCGGCCGCGCGCAAGACGCCGGGCGAGGTCGTGAACGTG CTGACGCATTGCAATGCCGGCTGGCTCGCGACCGTCGATTGGGGCACGGCCACCGCGCCGATCTATCTCGCTCACGATCG CGGCATTCCGGTCCATGTCTGGGTCGACGAGACGCGGCCGCGCAACCAGGGCGCCTCGCTGACCGCCTGGGAGCTCGGCC ATCACGGCGTGGCGCACACCGTGATCCCGGACAATACCGGCGGCCATCTGATGCAGCATGGCATGGTCGATCTCGCCATC GTCGGCACCGACCGCGTCGCCGCCAATGGCGACGTCTGCAACAAGATCGGCACCTATCTCAAGGCGTTGGCGGCCCACGA TAATGGCGTGCCGTTCTACGTCGCGCTGCCGTCGCCGACGATCGACTTCGCCGTCGCCGAGGGCCGGCAGATCCCGATCG AGCAGCGCAGCGCGCAGGAGGTCACGGAGATGACTGGCCGCACCGCCGATGGCCGCATCGAGACCGTGCGCATCGTGCCG CCGGGCTCGCAGGTCGCGAACTACGGCTTCGACGTCACGCCGGCGCGGCTGGTGACGGGACTGATCACGGAGCGCGGCGT GTTGCAGGCGGACGGCGCCGCGCTTGCGGCGGCGTTTCCGGAACGGGCGAAGCCCACGAACGATTAG
Upstream 100 bases:
>100_bases ACCGCGTTGATCACGGCGCCTGAGGCGCGCGATCCCGAACTCCTCAAGAAGCTCGATGCGGTCGCTGGCCGCCTTCTGCG CGGCTGACGGGAGATCGACG
Downstream 100 bases:
>100_bases ATCATCGTCATTAGGATCGACGCGCCGGCCGCTCGCGTTCGCGAGGCGACTATGTCAGCTTCAGCCCCGTCGCGGCCTCG AGTTCGGTGATCACCTGTGA
Product: methylthioribose-1-phosphate isomerase
Products: NA
Alternate protein names: M1Pi; MTR-1-P isomerase; S-methyl-5-thioribose-1-phosphate isomerase [H]
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MKVDGKHYRSIWLDADGWTVCAIDQRRLPHEFVVAQITTCEEAADAIRHMLVRGAPLIGATAAFGMALAMRDDRSDPGIE RAYEMLIATRPTAINLKWALDTMATMLRRLAPSERRDAAYSRAVDIAGEDVTINQGIAAHGLALIEAAAARKTPGEVVNV LTHCNAGWLATVDWGTATAPIYLAHDRGIPVHVWVDETRPRNQGASLTAWELGHHGVAHTVIPDNTGGHLMQHGMVDLAI VGTDRVAANGDVCNKIGTYLKALAAHDNGVPFYVALPSPTIDFAVAEGRQIPIEQRSAQEVTEMTGRTADGRIETVRIVP PGSQVANYGFDVTPARLVTGLITERGVLQADGAALAAAFPERAKPTND
Sequences:
>Translated_368_residues MKVDGKHYRSIWLDADGWTVCAIDQRRLPHEFVVAQITTCEEAADAIRHMLVRGAPLIGATAAFGMALAMRDDRSDPGIE RAYEMLIATRPTAINLKWALDTMATMLRRLAPSERRDAAYSRAVDIAGEDVTINQGIAAHGLALIEAAAARKTPGEVVNV LTHCNAGWLATVDWGTATAPIYLAHDRGIPVHVWVDETRPRNQGASLTAWELGHHGVAHTVIPDNTGGHLMQHGMVDLAI VGTDRVAANGDVCNKIGTYLKALAAHDNGVPFYVALPSPTIDFAVAEGRQIPIEQRSAQEVTEMTGRTADGRIETVRIVP PGSQVANYGFDVTPARLVTGLITERGVLQADGAALAAAFPERAKPTND >Mature_368_residues MKVDGKHYRSIWLDADGWTVCAIDQRRLPHEFVVAQITTCEEAADAIRHMLVRGAPLIGATAAFGMALAMRDDRSDPGIE RAYEMLIATRPTAINLKWALDTMATMLRRLAPSERRDAAYSRAVDIAGEDVTINQGIAAHGLALIEAAAARKTPGEVVNV LTHCNAGWLATVDWGTATAPIYLAHDRGIPVHVWVDETRPRNQGASLTAWELGHHGVAHTVIPDNTGGHLMQHGMVDLAI VGTDRVAANGDVCNKIGTYLKALAAHDNGVPFYVALPSPTIDFAVAEGRQIPIEQRSAQEVTEMTGRTADGRIETVRIVP PGSQVANYGFDVTPARLVTGLITERGVLQADGAALAAAFPERAKPTND
Specific function: Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P) [H]
COG id: COG0182
COG function: function code J; Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily [H]
Homologues:
Organism=Homo sapiens, GI72534748, Length=341, Percent_Identity=38.41642228739, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI23943880, Length=334, Percent_Identity=34.7305389221557, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI17557462, Length=338, Percent_Identity=33.4319526627219, Blast_Score=175, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6325375, Length=386, Percent_Identity=28.2383419689119, Blast_Score=144, Evalue=2e-35, Organism=Drosophila melanogaster, GI21357667, Length=344, Percent_Identity=37.5, Blast_Score=191, Evalue=8e-49, Organism=Drosophila melanogaster, GI24651647, Length=344, Percent_Identity=37.5, Blast_Score=191, Evalue=8e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000649 - InterPro: IPR005251 - InterPro: IPR011559 [H]
Pfam domain/function: PF01008 IF-2B [H]
EC number: =5.3.1.23 [H]
Molecular weight: Translated: 39519; Mature: 39519
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVDGKHYRSIWLDADGWTVCAIDQRRLPHEFVVAQITTCEEAADAIRHMLVRGAPLIGA CCCCCCEEEEEEEECCCCEEEEECCCCCCCHHEEEEEHHHHHHHHHHHHHHHHCCCCEEH TAAFGMALAMRDDRSDPGIERAYEMLIATRPTAINLKWALDTMATMLRRLAPSERRDAAY HHHHHEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCHHHHHHH SRAVDIAGEDVTINQGIAAHGLALIEAAAARKTPGEVVNVLTHCNAGWLATVDWGTATAP HHHEECCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCC IYLAHDRGIPVHVWVDETRPRNQGASLTAWELGHHGVAHTVIPDNTGGHLMQHGMVDLAI EEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHCCCEEEEE VGTDRVAANGDVCNKIGTYLKALAAHDNGVPFYVALPSPTIDFAVAEGRQIPIEQRSAQE EECCCEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHH VTEMTGRTADGRIETVRIVPPGSQVANYGFDVTPARLVTGLITERGVLQADGAALAAAFP HHHHHCCCCCCCEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCHHHCCC ERAKPTND CCCCCCCC >Mature Secondary Structure MKVDGKHYRSIWLDADGWTVCAIDQRRLPHEFVVAQITTCEEAADAIRHMLVRGAPLIGA CCCCCCEEEEEEEECCCCEEEEECCCCCCCHHEEEEEHHHHHHHHHHHHHHHHCCCCEEH TAAFGMALAMRDDRSDPGIERAYEMLIATRPTAINLKWALDTMATMLRRLAPSERRDAAY HHHHHEEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHCCCHHHHHHH SRAVDIAGEDVTINQGIAAHGLALIEAAAARKTPGEVVNVLTHCNAGWLATVDWGTATAP HHHEECCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCC IYLAHDRGIPVHVWVDETRPRNQGASLTAWELGHHGVAHTVIPDNTGGHLMQHGMVDLAI EEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHCCCEEEEE VGTDRVAANGDVCNKIGTYLKALAAHDNGVPFYVALPSPTIDFAVAEGRQIPIEQRSAQE EECCCEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHHHH VTEMTGRTADGRIETVRIVPPGSQVANYGFDVTPARLVTGLITERGVLQADGAALAAAFP HHHHHCCCCCCCEEEEEEECCCHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCHHHCCC ERAKPTND CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA