Click here to switch to the map view.

The map label for this gene is tldD [H]

Identifier: 146343480

GI number: 146343480

Start: 6968424

End: 6969848

Strand: Direct

Name: tldD [H]

Synonym: BRADO6712

Alternate gene names: 146343480

Gene position: 6968424-6969848 (Clockwise)

Preceding gene: 146343478

Following gene: 146343481

Centisome position: 93.45

GC content: 67.65

Gene sequence:

>1425_bases
ATGACAGCTCCCACCACGTCCCTGCTCGAGCGCGCCAATCTGGATCGTGATGCGGTCCGGAGTGAGGTCGCCCGCGGCCT
CGCTGGCGCCGATGACGGCGAATTGTTCTTCGAATACAGCCAGACCGAGGCACTGACCTTCGACAACGGCCGGCTGAAGC
AGGCGACCTATGACACCAGCCAGGGCTTTGGCCTGCGCGCGGTGAAGGACGATGCGGTCGGCTACGCCCATTCCTCTGAC
GTGTCGCTGCCGGCGCTGATGCGCGCAGCCGATGCCGTCAGCGCCGTGCGCGGCGGCTATTCCGGCACCTTCGCGAGCGC
GCCGCCGCACACCAATGTGCGCCTCTATGCCGACGACAATCCGCTCGACGCGCCGGGCTTCGAGAGCAAGGTCAAGCTGC
TCGGCGAGATCGACGCTTACCTGCGCGACAAGGACCCGCGCGTGCGCCAGGTGACGGTGAGCCTGGGTGCGACCTGGCAG
GTCGTGGAAATCCTGCGCCCGGACGGCGAGAGCTATCGCGATATCCGCCCGCTGGTGCGGGTCAACGTTTCCGTGGTCGC
CGGCCAGGGTGACCGCCAGGAGAGCGGCAGCAAGGGCTATGGCGGCCGCGAGGCCTATGCGCGCTTCATCGAGACCAAGG
CGTGGCGCGAAGCCGCCGACGGCGCGCTGCGCGAGGCGCTGGTCAATCTCGAATCCGTCCCCGCCCCTGCCGGCGAGATG
GACGTCGTGTTGGGGGCCGGCTGGCCCGGCGTGATGCTGCATGAAGCCGTCGGCCACGGCCTCGAAGGCGATTTCAACCG
CAAGAAGACCTCGGCCTTCGCCGGCCTGATGGGCCAACCGGTGGCGGCCAAGGGCGTCACCGTGGTCGACGACGGCACCA
TGGCCTCGCGCCGCGGCTCGCTGTCGATCGACGACGAGGGCACGCCGACCAGCCGCACCGTGCTGATCGAGGATGGCATT
CTGGTCGGCTACATGCAGGACCGCCAGAACGCGCGCCTGATGAACATGGCGCCGACCGGCAACGGCCGCCGCCAGGGCTA
TGCGCATGTGCCGATGCCGCGGATGACCAACACCTACATGCTGGCCGGCGAGCGCGATCCAGCCGAGATCATCGCCTCGG
TGAAGAACGGCATCTACGCCGTGAATTTCGGCGGCGGCCAGGTCGACATCACCTCCGGCAAATACGTCTTCCAGTGCACC
GAGGCCTACAAGATCGAGAATGGCAAGGTCGGCGCGCCGGTGAAGGGCGCGATGCTGATCGGCAATGGTCCGACCGACCT
CAACCGCATCAGCATGATCGGCAACGATCTCGCGCTCGACACCGGCATCGGCACCTGCGGCAAGAACGGCCAGGGCGTGC
CGGTCGGCGTGGGACAGCCGACGCTTCGCATGGATCGCATCACGGTAGGAGGCACGGGCCGATGA

Upstream 100 bases:

>100_bases
GAACGATCTCAACCATGTCCGTTCGGTAATCATCCTGCCCCTCGCGCCCCGGCGTCAAAACAACTATCTTGGAATGAACG
CTCCGACAACGGATTGACCC

Downstream 100 bases:

>100_bases
GCCTCGACAAGATGTCCACGAGCAAGGTCAGCACCAAAGCTCCGCGCAAGGAAACGACGTGGGGCGGACAGATTGCCCAG
CTCGCCGCCGTCGTCGCGGT

Product: putative peptidase TldD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MTAPTTSLLERANLDRDAVRSEVARGLAGADDGELFFEYSQTEALTFDNGRLKQATYDTSQGFGLRAVKDDAVGYAHSSD
VSLPALMRAADAVSAVRGGYSGTFASAPPHTNVRLYADDNPLDAPGFESKVKLLGEIDAYLRDKDPRVRQVTVSLGATWQ
VVEILRPDGESYRDIRPLVRVNVSVVAGQGDRQESGSKGYGGREAYARFIETKAWREAADGALREALVNLESVPAPAGEM
DVVLGAGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLMGQPVAAKGVTVVDDGTMASRRGSLSIDDEGTPTSRTVLIEDGI
LVGYMQDRQNARLMNMAPTGNGRRQGYAHVPMPRMTNTYMLAGERDPAEIIASVKNGIYAVNFGGGQVDITSGKYVFQCT
EAYKIENGKVGAPVKGAMLIGNGPTDLNRISMIGNDLALDTGIGTCGKNGQGVPVGVGQPTLRMDRITVGGTGR

Sequences:

>Translated_474_residues
MTAPTTSLLERANLDRDAVRSEVARGLAGADDGELFFEYSQTEALTFDNGRLKQATYDTSQGFGLRAVKDDAVGYAHSSD
VSLPALMRAADAVSAVRGGYSGTFASAPPHTNVRLYADDNPLDAPGFESKVKLLGEIDAYLRDKDPRVRQVTVSLGATWQ
VVEILRPDGESYRDIRPLVRVNVSVVAGQGDRQESGSKGYGGREAYARFIETKAWREAADGALREALVNLESVPAPAGEM
DVVLGAGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLMGQPVAAKGVTVVDDGTMASRRGSLSIDDEGTPTSRTVLIEDGI
LVGYMQDRQNARLMNMAPTGNGRRQGYAHVPMPRMTNTYMLAGERDPAEIIASVKNGIYAVNFGGGQVDITSGKYVFQCT
EAYKIENGKVGAPVKGAMLIGNGPTDLNRISMIGNDLALDTGIGTCGKNGQGVPVGVGQPTLRMDRITVGGTGR
>Mature_473_residues
TAPTTSLLERANLDRDAVRSEVARGLAGADDGELFFEYSQTEALTFDNGRLKQATYDTSQGFGLRAVKDDAVGYAHSSDV
SLPALMRAADAVSAVRGGYSGTFASAPPHTNVRLYADDNPLDAPGFESKVKLLGEIDAYLRDKDPRVRQVTVSLGATWQV
VEILRPDGESYRDIRPLVRVNVSVVAGQGDRQESGSKGYGGREAYARFIETKAWREAADGALREALVNLESVPAPAGEMD
VVLGAGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLMGQPVAAKGVTVVDDGTMASRRGSLSIDDEGTPTSRTVLIEDGIL
VGYMQDRQNARLMNMAPTGNGRRQGYAHVPMPRMTNTYMLAGERDPAEIIASVKNGIYAVNFGGGQVDITSGKYVFQCTE
AYKIENGKVGAPVKGAMLIGNGPTDLNRISMIGNDLALDTGIGTCGKNGQGVPVGVGQPTLRMDRITVGGTGR

Specific function: Suppresses the inhibitory activity of the carbon storage regulator (CsrA) [H]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=450, Percent_Identity=53.3333333333333, Blast_Score=452, Evalue=1e-128,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 50336; Mature: 50205

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPTTSLLERANLDRDAVRSEVARGLAGADDGELFFEYSQTEALTFDNGRLKQATYDTS
CCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCEEEEECCCC
QGFGLRAVKDDAVGYAHSSDVSLPALMRAADAVSAVRGGYSGTFASAPPHTNVRLYADDN
CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCC
PLDAPGFESKVKLLGEIDAYLRDKDPRVRQVTVSLGATWQVVEILRPDGESYRDIRPLVR
CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHCCEEE
VNVSVVAGQGDRQESGSKGYGGREAYARFIETKAWREAADGALREALVNLESVPAPAGEM
EEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
DVVLGAGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLMGQPVAAKGVTVVDDGTMASRRGS
EEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCC
LSIDDEGTPTSRTVLIEDGILVGYMQDRQNARLMNMAPTGNGRRQGYAHVPMPRMTNTYM
EEECCCCCCCCEEEEEECCEEEEEEECCCCCEEEEECCCCCCCCCCEEECCCCCCCCEEE
LAGERDPAEIIASVKNGIYAVNFGGGQVDITSGKYVFQCTEAYKIENGKVGAPVKGAMLI
EECCCCHHHHHHHHHCCEEEEEECCCEEEEECCCEEEEEEEEEEECCCCCCCCCCCEEEE
GNGPTDLNRISMIGNDLALDTGIGTCGKNGQGVPVGVGQPTLRMDRITVGGTGR
CCCCCCCHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCC
>Mature Secondary Structure 
TAPTTSLLERANLDRDAVRSEVARGLAGADDGELFFEYSQTEALTFDNGRLKQATYDTS
CCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCEEEEECCCC
QGFGLRAVKDDAVGYAHSSDVSLPALMRAADAVSAVRGGYSGTFASAPPHTNVRLYADDN
CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCC
PLDAPGFESKVKLLGEIDAYLRDKDPRVRQVTVSLGATWQVVEILRPDGESYRDIRPLVR
CCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHCCEEE
VNVSVVAGQGDRQESGSKGYGGREAYARFIETKAWREAADGALREALVNLESVPAPAGEM
EEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
DVVLGAGWPGVMLHEAVGHGLEGDFNRKKTSAFAGLMGQPVAAKGVTVVDDGTMASRRGS
EEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCC
LSIDDEGTPTSRTVLIEDGILVGYMQDRQNARLMNMAPTGNGRRQGYAHVPMPRMTNTYM
EEECCCCCCCCEEEEEECCEEEEEEECCCCCEEEEECCCCCCCCCCEEECCCCCCCCEEE
LAGERDPAEIIASVKNGIYAVNFGGGQVDITSGKYVFQCTEAYKIENGKVGAPVKGAMLI
EECCCCHHHHHHHHHCCEEEEEECCCEEEEECCCEEEEEEEEEEECCCCCCCCCCCEEEE
GNGPTDLNRISMIGNDLALDTGIGTCGKNGQGVPVGVGQPTLRMDRITVGGTGR
CCCCCCCHHHHHHCCCEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]